Basic Information

Insect: Drosophila paranaensis
Gene Symbol: -
Assembly: GCA_035047545.1
Location: JAWNPL010000026.1:2396079-2401419[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0024 0.16 12.5 0.5 1 23 148 170 148 170 0.97

2 14 0.00014 0.0094 16.4 1.3 1 23 395 417 395 417 0.98

3 14 1.7 1.1e+02 3.6 0.8 1 23 423 446 423 446 0.94

4 14 3.4 2.3e+02 2.6 0.2 1 23 473 496 473 496 0.91

5 14 0.0012 0.083 13.4 1.9 3 23 764 784 763 784 0.92

6 14 0.049 3.3 8.4 1.4 1 23 790 813 790 813 0.98

7 14 0.19 13 6.5 1.6 2 23 850 871 849 872 0.93

8 14 0.0085 0.58 10.8 0.8 1 23 893 916 893 916 0.97

9 14 0.015 1 10.0 0.3 1 23 1135 1158 1135 1158 0.91

10 14 0.00033 0.023 15.2 4.3 1 23 1171 1193 1171 1193 0.98

11 14 6.8e-05 0.0046 17.4 0.1 2 23 1199 1221 1198 1221 0.96

12 14 0.0006 0.041 14.4 5.0 1 23 1229 1254 1229 1254 0.93

13 14 0.75 51 4.6 2.5 2 23 1260 1281 1259 1281 0.94

14 14 0.29 19 5.9 1.2 1 23 1287 1310 1287 1310 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0024	0.16	12.5	0.5	1	23	148	170	148	170	0.97
2	14	0.00014	0.0094	16.4	1.3	1	23	395	417	395	417	0.98
3	14	1.7	1.1e+02	3.6	0.8	1	23	423	446	423	446	0.94
4	14	3.4	2.3e+02	2.6	0.2	1	23	473	496	473	496	0.91
5	14	0.0012	0.083	13.4	1.9	3	23	764	784	763	784	0.92
6	14	0.049	3.3	8.4	1.4	1	23	790	813	790	813	0.98
7	14	0.19	13	6.5	1.6	2	23	850	871	849	872	0.93
8	14	0.0085	0.58	10.8	0.8	1	23	893	916	893	916	0.97
9	14	0.015	1	10.0	0.3	1	23	1135	1158	1135	1158	0.91
10	14	0.00033	0.023	15.2	4.3	1	23	1171	1193	1171	1193	0.98
11	14	6.8e-05	0.0046	17.4	0.1	2	23	1199	1221	1198	1221	0.96
12	14	0.0006	0.041	14.4	5.0	1	23	1229	1254	1229	1254	0.93
13	14	0.75	51	4.6	2.5	2	23	1260	1281	1259	1281	0.94
14	14	0.29	19	5.9	1.2	1	23	1287	1310	1287	1310	0.96

Sequence Information

Coding Sequence: ATGGCGCACAAGCGAATAAAAACAGAGGACATGGATCCGAATTACAAATTTTCGTGTCGCTGTTGCCTCAAATCCGAGGCGGAATTCTACAAACTGGACTCGCTAATTGAGTGCGGCAGTGGCGAAAGTGACGCGTCCTCTACGAAAATGCCCCTACTGCGTCTACTATTGTTTTGCATGCGCATCGAAAATCAGCCCGAGCTGCCGCAATACATATGCGTGGAGTGTACTAAAAGTTTGCAAATCGCGTACTATTTCATACAGAACGGTCTGCGAGCACACGAAATACTGTGTCGGAAGCTGTGCCCTGGCAAGCTGAAGAGCTTGACGCGTGCTAATGGACAGCAGACAGCGACAACGCAATGGGTCGAGTCGAAAGCGCGTGAGGATGCGACGCAGTCCAGGCTCTGGGAGCAAAAGCCACCGAAGCCCGCTGCGAGACACGAATGCAAAGTGTGCGGTGCCATTATATACAATCGCATGGAACTCAAGCAGCACATCAAAATGCACACAGATGCATCGAGTCATCAGTGCAAATTGTGCAGCTTTGTCACGCTCAAGCATCGCCAGCTGCCGGAGCATTATCGCAAAGTTCACGGACTGACAGCTTCCCAAATCGAGCATCAACTAAAGATCCGCAGATCCATGCTGGCAGCTGCAaacgcaacaacagcaccagctaAAATAGCAATTGAGACAGCAGCTGACGATGATCAAGTTAAGGTGTGCACCCTGGAGGATATGGAACTTCTGATACCCACTGTTCTGACTCCAGAAGATTTTTCGCATCCGCAACTTGATGCGGATCAGCTGCGTGACATAGAGCAACAGTTGGCGAACTCGCTGCCCATTACGCACTCcgccagtcagccagcagAGCCAACGATAGGAAGTGGAAATAGCGCCAACGTAAGCATAGGAGGCGAGTTTCTGGTCATGCCCGATGGCTCGTTGCAGCAAGTGAATGATGGAGGTGTTGTGTTCGAGTACATTGACgatagcaaaaacaacaatgcgacgAGTAATATGACATTGCAGAATCTATTGGATGACTCCAAAGTCGATTTAACATACAATGCAATGGATATCGATTTAACTCACATGGTTTTGGACAATGCATTGCCACAGATAACTGTCAAGCCAAAGCCGCGTCCAGCACCCGGGTCCACAGGCGCCCTCAAACATAAGTGCAAACTGTGTCCAAAAGCATTTCCCACGGTAGCGCGTCTGAAATCTCATCAATTAACGCACAGTCATTTGCCTAAGTTCTATTGCGATCAGTGCTCCTATTATTCGCTACGCAGCGCCGATCTCATCCAGCACTATACGACGGAGCACAAGTCCTGCGTTAGCGAGAGTCGTTTGAATCATTTGGATAAGTCGCAATTAATTTTGCCGGCGGATAGAAGTCGCATTTATTCCTGCGATTTGTGTTTGTTCGAAGCGCCCACCAGTGGGAAATTGCGTGTACACTACAGCGATAAGCATCTGATAGTGCCCAGTGAGGTGCAACTACGTCCCAGTTGGACGCATGAGCCGAAGCAAGGGAGCTCGTATACAATGGTAAATAGTGGCACTGCTTCCAGTCAGCCCGATCTTCCACTTGGCATCAAATATCCCCCTATGACGCCAACGGCAACCACGGTAGCAACTTCGTCAACGTCAACTGCATTGGCGCCGCCAACTCtggcatcaacaacaacaacggtaATGAATGACATTAATGTTGTGGTGGATACCACAGCATTGTTctatgcagcagctgcagagcaaTTACCGAATACTAATGCTGCAACATCAgaaacaacggcaacaacagaaTCAAACACATTTTCAATGTTTCCCGAGCAATCGTTTGTTAACAGTctaacaacaccagcaacaacgcCGACAACAGCTTCAGTAGACACAAACGGTGTGGCAACAACCGCTTCGGCGACAACAAACCCAAACACAAGCATATTTGGTGATATGCAGGATTTTATAGACAATACCGATGTGGCGGCTATTTGTACCATACCCGCCGATGATATGCCTGTCGTTGATGGAGACGATATTGTTATtgataacaataatataagCTTAGATTTTGATGCGGAAAATCTATTTGAAGATTTTGAAGATGTAGAGGTTGGCGAAGAGGATgaagaagacgaagaggaCGCTGAAAATGAggatgaaaatgaaaataacgATGCGGCTGCCGATCAAAATCTGTTGCTTACCagtgacgacgacgacgtggATGACTTTGATGACGAACAATCAAAGCATCTGCAGAAGCCGTATTGTATctattgtaataaaaaattcacCAGCCAATATAAGTTTGAGAATCACATGTTTGTGCATCGCGGATTGGCGCCGTATCGCTGTGAGCTCTGCACAAATCTGTATAATATGAAACGTCTTCTCATTCGGCATTATAAGACGGTTCATAAACGCATGCCCACACGGGACATGGTGCAGGCCAAGGGCGACAAGGTGTCTGTAGCTCGCTCAGCCGTTGAAAAGATAAATGTTCAACTTGACAAAAATCCCATGGTAATGTGCGCGAAGTGTCCATTTGAATGCGAACGGGAGGAAGAAATGCGCAGACATTTAAATGCACATCATGGTATTAACGATGgtggCTCAACTCATGCTAATGAGGTGTTTATCATACGCAAACTGCCCTATGACTGTCCACGCTGTATTCGGTCCTTTGCGGCTAAACGCACACTCACGCGACATTTGCAACGTAGTCATTTAGTGGATACTATTATTGAGATGCAGGCGCCTCAATTGACAACTAGTTCTGCGGCCACCACGACGACATCGACGGCAACAACCACATTGCCGCAGAATGCTAGTGATGGGAATAAAATAGGCACAACATCCGGAGCAACAACTGAACTGGATTCGAATATATTGGCCCAGCATTTCGCTGACTCTGTGGATGGTGATGGCAATGGTGaaggcgatggcgatggcagTGGAAAATGCGACAAGGACGCAGCATGTACAATGGAAAATGTAAGCACAGATATACCACCCGATGCACCACAAGAGACAGTCgatgcagcaacaactgaaacTACAGAAtctgcaacaataacaaataccGAAGCTACAAAAGCTGAAATATcatcaataacaataacaacaacagtaacagaaGAAAGAGGAccagaaacaacaaaagccgctGGTTCAACACTATTTCCAACGCCTACGCCTTTTGACTTTGATCTTGATTTTATGGGCGATGGTGAGCATGTCACCACTATTAAGAACAACGACAACTTCAACATTGCTCCTAATCCCAGTCATCTGCTGAATGGAACCGATAAGCTACTGACTGCTGCGTTGGAGCCATCGCCAGTTAAAGACCTTCGATCGCGCCTGCCCCGTACACCGATATTTGTGTGCAAGCAATGCAATCAGACCTTCGATGAGCTTGGCAAGCTGGTGCAGCACGAAATGGATCAACATTCCAGCGGCATTGCATCGCCGCGCATCGGCTACCAGCATCAGTGCAAGATCTGCAATACCACATATCGCACCATAACGCTTCTTAACTATCATATGAAGCGACACACGCCAGTAAAAGTTTCGTGCAAACAGTGCCCCAAAGAGTTTGCAAACATTTCCGATTTGGAGCAACATTTACTGACGGAGCATAGCGTCGCAACACAGGCGCCTTTCAAGTGTGGCTTAGATGGCTGCACAAAGACATTTAACTACAAACATCATTTGAAACGGCATCAGACAGCCTCTCACACGCGCGCACAGTGTATCTGTCCAGAATGCGGACGCGATATGCTTACTAGGCTGCATCTCAGGAATCATATGTCCAGCCACAGGAGCAAACACTCTTATAAGTGTCCCAAATGTATTCGCAACTATATGAGGCGCAATCCATTTCGCAGACATGCGCTACGTGAGCACAAGTGGGAGCCTACCGAGGAAGAGATTGATCAAATTTATGGCGTTAATGATATACAGACTTTCAGTAAAGTTTGCGGACGTAAATCGTTGAAGGTTGACATCGAGAATTCTGATTAG
Protein Sequence: MAHKRIKTEDMDPNYKFSCRCCLKSEAEFYKLDSLIECGSGESDASSTKMPLLRLLLFCMRIENQPELPQYICVECTKSLQIAYYFIQNGLRAHEILCRKLCPGKLKSLTRANGQQTATTQWVESKAREDATQSRLWEQKPPKPAARHECKVCGAIIYNRMELKQHIKMHTDASSHQCKLCSFVTLKHRQLPEHYRKVHGLTASQIEHQLKIRRSMLAAANATTAPAKIAIETAADDDQVKVCTLEDMELLIPTVLTPEDFSHPQLDADQLRDIEQQLANSLPITHSASQPAEPTIGSGNSANVSIGGEFLVMPDGSLQQVNDGGVVFEYIDDSKNNNATSNMTLQNLLDDSKVDLTYNAMDIDLTHMVLDNALPQITVKPKPRPAPGSTGALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCSYYSLRSADLIQHYTTEHKSCVSESRLNHLDKSQLILPADRSRIYSCDLCLFEAPTSGKLRVHYSDKHLIVPSEVQLRPSWTHEPKQGSSYTMVNSGTASSQPDLPLGIKYPPMTPTATTVATSSTSTALAPPTLASTTTTVMNDINVVVDTTALFYAAAAEQLPNTNAATSETTATTESNTFSMFPEQSFVNSLTTPATTPTTASVDTNGVATTASATTNPNTSIFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEDFEDVEVGEEDEEDEEDAENEDENENNDAAADQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARSAVEKINVQLDKNPMVMCAKCPFECEREEEMRRHLNAHHGINDGGSTHANEVFIIRKLPYDCPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQAPQLTTSSAATTTTSTATTTLPQNASDGNKIGTTSGATTELDSNILAQHFADSVDGDGNGEGDGDGSGKCDKDAACTMENVSTDIPPDAPQETVDAATTETTESATITNTEATKAEISSITITTTVTEERGPETTKAAGSTLFPTPTPFDFDLDFMGDGEHVTTIKNNDNFNIAPNPSHLLNGTDKLLTAALEPSPVKDLRSRLPRTPIFVCKQCNQTFDELGKLVQHEMDQHSSGIASPRIGYQHQCKICNTTYRTITLLNYHMKRHTPVKVSCKQCPKEFANISDLEQHLLTEHSVATQAPFKCGLDGCTKTFNYKHHLKRHQTASHTRAQCICPECGRDMLTRLHLRNHMSSHRSKHSYKCPKCIRNYMRRNPFRRHALREHKWEPTEEEIDQIYGVNDIQTFSKVCGRKSLKVDIENSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00512961;
90% Identity: iTF_00586925;
80% Identity: -