Basic Information

Insect: Drosophila paranaensis
Gene Symbol: -
Assembly: GCA_035047545.1
Location: JAWNPL010000149.1:265773-272365[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.4e-05 0.0016 18.8 2.1 1 23 234 256 234 256 0.97

2 18 7.9e-06 0.00054 20.3 0.4 1 23 262 284 262 284 0.97

3 18 0.0012 0.079 13.5 0.9 1 23 290 312 290 312 0.95

4 18 1.7e-05 0.0011 19.3 3.1 1 23 318 340 318 340 0.97

5 18 3.8e-05 0.0026 18.1 4.7 1 23 346 368 346 368 0.99

6 18 7e-05 0.0047 17.3 5.7 1 23 374 396 374 396 0.97

7 18 3.4e-07 2.3e-05 24.6 4.3 1 23 402 424 402 424 0.98

8 18 1.2e-07 8.3e-06 26.0 2.4 1 23 430 452 430 452 0.97

9 18 7.1e-05 0.0048 17.3 6.7 1 23 459 481 459 481 0.97

10 18 0.00012 0.0084 16.5 6.5 1 23 487 509 487 509 0.98

11 18 1.1e-05 0.00075 19.8 4.5 1 23 515 537 515 537 0.98

12 18 8e-06 0.00054 20.3 8.1 1 23 543 565 543 565 0.98

13 18 6.5e-06 0.00044 20.6 7.6 1 23 571 593 571 593 0.97

14 18 7.3e-07 5e-05 23.5 7.7 1 23 599 621 599 621 0.98

15 18 0.00023 0.015 15.7 9.5 1 23 627 650 627 650 0.95

16 18 8.1e-05 0.0055 17.1 0.9 1 23 656 678 656 678 0.98

17 18 0.00089 0.06 13.8 3.4 1 23 688 710 688 710 0.97

18 18 1e-05 0.00068 20.0 1.6 1 23 716 739 716 739 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.4e-05	0.0016	18.8	2.1	1	23	234	256	234	256	0.97
2	18	7.9e-06	0.00054	20.3	0.4	1	23	262	284	262	284	0.97
3	18	0.0012	0.079	13.5	0.9	1	23	290	312	290	312	0.95
4	18	1.7e-05	0.0011	19.3	3.1	1	23	318	340	318	340	0.97
5	18	3.8e-05	0.0026	18.1	4.7	1	23	346	368	346	368	0.99
6	18	7e-05	0.0047	17.3	5.7	1	23	374	396	374	396	0.97
7	18	3.4e-07	2.3e-05	24.6	4.3	1	23	402	424	402	424	0.98
8	18	1.2e-07	8.3e-06	26.0	2.4	1	23	430	452	430	452	0.97
9	18	7.1e-05	0.0048	17.3	6.7	1	23	459	481	459	481	0.97
10	18	0.00012	0.0084	16.5	6.5	1	23	487	509	487	509	0.98
11	18	1.1e-05	0.00075	19.8	4.5	1	23	515	537	515	537	0.98
12	18	8e-06	0.00054	20.3	8.1	1	23	543	565	543	565	0.98
13	18	6.5e-06	0.00044	20.6	7.6	1	23	571	593	571	593	0.97
14	18	7.3e-07	5e-05	23.5	7.7	1	23	599	621	599	621	0.98
15	18	0.00023	0.015	15.7	9.5	1	23	627	650	627	650	0.95
16	18	8.1e-05	0.0055	17.1	0.9	1	23	656	678	656	678	0.98
17	18	0.00089	0.06	13.8	3.4	1	23	688	710	688	710	0.97
18	18	1e-05	0.00068	20.0	1.6	1	23	716	739	716	739	0.96

Sequence Information

Coding Sequence: ATGCATCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGCGGTGACCACTGGCGGTGGCACCACCATCACCTTGGGCGGACCGCCGCCATTGCCCGGCAACAAGTCTGATCATAAAGAGGACGGCAGCAAGCCGCCGCACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCGCAGTTATTTACATACCACGAGGTATTTGGCAAGATCCATGGCGATGTGGTGAATCATGTGGCGGCGGTGCATGGGAGTCAGTTGCCACCGCCGCAACTGCCCCCGCCGCCGCCATTACCGCCGCAGACGACGCATTCGGCtagcgcagctgcagctgcagcggcggtGTCCTCAAATAATGCAGCCGTCGCTGCTGTAATGGCCTCGGCCAATGCAGCAGCCGCGGCTGCAGCGGTCGCCTCGGCCGCGGCCAcggcccagcagcaacagcaacagcagcaacaacaacaacaacagcaagcccCAGCGACAAGCACAAATGTTGGAACACAGCAGGGCATCGCCACGGTGACCACAACTAGCTCCTCCGGCAGCAACGGGGGGAATGCGACAACGACGGTTAAGGGTGAGTTGCTAATGCCCAAAATGGAGGGCGGCATCCATGGCGTTGATGGGCAATCGAGCGTTGCGTTGGCCCCAGATGGCACGCCCATTGCGACTGGGACGCATGTGTGCGACATTTGTGGCAAGATGTTCCAATTTCGCTATCAGCTAATTGTGCACCGTCGCTACCACAGCGAGCGCAAGCCGTTTATGTGTCAGGTGTGCGGTCAAGGTTTTACCACATCGCAGGACTTGACCAGGCATGGCAAGATCCATATTGGCGGTCCCATGTTCACTTGCATTGTCTGCTTCAATGTGTTTGCCAACAATACGAGTCTGGAGCGCCATATGAAACGGCATTCGACGGACAAGCCATTCGCGTGCACCATTTGCCAAAAGACTTTCGCACGCAAGGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCACATCGGTGCGACTTCTGCTCCAAGACGTTTACGCGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCATACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATACTGCACCAAGACGTTTACGCGCAAGGAGCATTTGACGAATCATGTCCGCCAGCACACGGGCGATTCGCCGCATCGTTGCAGCTACTGCAAGAAGACGTTCACCCGCAAGGAGCATTTGACGAATCATGTGCGCCTGCACACTGGGGATTCGCCGCACAAGTGCGAATACTGCCAGAAGACGTTCACGCGCAAGGAGCATCTCAATAATCACATGCGCCAGCACTCCAGCGACAATCCCCACTGTTGCAATGTGTGCAACAAGCCCTTCACGCGCAAGGAGCACTTGATCAATCACATGTCACGCTGCCACACCGGCGATCGGCCCTTCACCTGCGAGACGTGCGGCAAATCGTTCCCCCTCAAGGGCAACCTCTTGTTCCATCAGCGCAGCCACACCAAGGGCCAGGAGTGCGAGCGTCCATTCGCCTGCGAGAAGTGCCCCAAGAACTTCATATGCAAAGGTCACTTGGTCTCGCATATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCgtgcatccgcatccgcaaaTACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCATTCGGCGACGACCACAATGCACACCATACAGCAGATAACGGCTGGCGCCGCAGCGGCTGGCGCAGGTGCCGTCCAGCTGACGCCCGGCCTGGTGCCGCTCGTCACCAGCACGCTCATCTCCCACAACGCCCAGCAGtcgcagaagcagcagcaggtggctGCCGCAGTGgccgcccagcagcaggcggcagcagccgctgcccagCAAcaggcagccgcagcggctCAACAgcaagcggcggcagcagcagcgcaccagcagcaccagcaacaggtGGCcgctcagcagcaacagcaacaacagcaggcagCGGTTGCtgcacatcagcagcagcaacagcagctgcagcagcaacagttgctccaATTGTCCATACAGCAGGCGGCGcatcaccatcagcagcaacagcatcagcagcaacagcagcagcagcaacaacaacagcagcagcagcagcaacagcagcatcatccACAGCAACAGTCGCATCCGCAggcgccgccgcagcagcaacaacagcaacagccaccgCCACAGGTGCCCATTGCATTGATAAGTGATCCGAGCGCGCTGGCACGTGCCGccatgcagctgcagcatctgcCCACAAATGTGGAACAGCATCCGGTGGTTTACTAA
Protein Sequence: MHHVSAASSAPSVVSAPAVTTGGGTTITLGGPPPLPGNKSDHKEDGSKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQTTHSASAAAAAAAVSSNNAAVAAVMASANAAAAAAAVASAAATAQQQQQQQQQQQQQQAPATSTNVGTQQGIATVTTTSSSGSNGGNATTTVKGELLMPKMEGGIHGVDGQSSVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLVTSTLISHNAQQSQKQQQVAAAVAAQQQAAAAAAQQQAAAAAQQQAAAAAAHQQHQQQVAAQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQQQHQQQQQQQQQQQQQQQQQQHHPQQQSHPQAPPQQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00479608;
80% Identity: -