Dpar008616.1
Basic Information
- Insect
- Drosophila paramelanica
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035043915.1
- Location
- JAWNMO010000576.1:256370-271700[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-117 4.5e-113 377.4 23.6 1 299 8 299 8 300 0.98
Sequence Information
- Coding Sequence
- ATGCTTCCGGAGTATCACAAGGCTGAAGCGCGCCTAGCAGCTCGACGCCTAGCCCGTGCCGAAGCTCGTGAGATACGTATGCGAGAGCTTGAACGGCAGCAAAAAGAGCAGGAGCAAAACGCTGACCGTGCATTTGACATGCAAACCATAAGTACCAGTGTCATTATCGACTCACTAGCATCACATCCCACACGCCATACCTACAGCGGTCTTCTAAACGTGACACGTGCATCAGCTTCGCGACGTAGTAGTGAGGATTCTTTGGAGGATGAAGGTCGCAGTTTGCGTGATATCAAACACGAACTTAAAGAAGTAGAAGAACGTTTTCGAAAAGCGATGATAACAAATGCCCAGTTAGACAACGATCGCTCATCTCAAACCTATGAAGTCAAGTTACTGAAAGACAAAAGTGAAACAATGCAGGAAACTTTTGCGCAGCTGCAACgggaatttaaaaacaaacttcgCGATTGTAATACCTTAAAGCGCAATTTAGATCGCacaacaattgaattgaatctAGTTAAAGGACAGTTAAGCGAGCGCGATGCTTTAATAGCAGAACACGGTCTTGTTATTGTAGCAATTGAGAATTCTGATGGTAGTGATGCCAAGCGGGCACTTGTCAGTGCTGAAAACGCCAATACCTTGGCTACCGTGCAGGGTTCGCTTGATGTAAGACTTAAAAAGTTTGCAGATGAAAAACAATGGCTTTTgattgaaatgcaaaagctGCGCGATCAACTAGATACTTATAAAAGTGAAGGCGGAATTAATCGCGGGAGTTTATTGCATGGCTCTCTTGGGAATGTTGATGACTACGAGGTTCAAAGAGAATCAAACAAAATCATATCagattacaaatacaaactgCAAAAGGCTGAAGCGGAAATCGCTGGTCTCCAAGCAAACCTAGCACGATCTGAAACACAAGTTATACGTTATAAAAGCACGGCAGAAGCAGCCGAAAAAGCGGAAGCTGAACTGAAAGTCGAACGACGTAAACTACAACGTGAGGTGAGTCATTAA
- Protein Sequence
- MLPEYHKAEARLAARRLARAEAREIRMRELERQQKEQEQNADRAFDMQTISTSVIIDSLASHPTRHTYSGLLNVTRASASRRSSEDSLEDEGRSLRDIKHELKEVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSETMQETFAQLQREFKNKLRDCNTLKRNLDRTTIELNLVKGQLSERDALIAEHGLVIVAIENSDGSDAKRALVSAENANTLATVQGSLDVRLKKFADEKQWLLIEMQKLRDQLDTYKSEGGINRGSLLHGSLGNVDDYEVQRESNKIISDYKYKLQKAEAEIAGLQANLARSETQVIRYKSTAEAAEKAEAELKVERRKLQREVSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00547348;
- 80% Identity
- -