Dpar010872.1
Basic Information
- Insect
- Drosophila paramelanica
- Gene Symbol
- retn
- Assembly
- GCA_035043915.1
- Location
- JAWNMO010000634.1:382067-398470[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6e-26 8.6e-23 80.5 0.0 2 89 342 427 341 427 0.96 2 3 2.8 4.2e+03 -1.9 0.4 11 41 575 613 555 626 0.56 3 3 7.8 1.2e+04 -3.3 0.2 58 81 693 717 689 727 0.67
Sequence Information
- Coding Sequence
- ATGCGCCAATATGTGCCATGTTATGGCCACAAAGAAGATGGTGGTGCTCACGGAGAGGACAGAAGCGAAGGCGACGGACGAACAGTAAAGGCAAAGGCGGAGGCGAAGGCGGAGGCGGAGGCTGTTGCCACTAAGCCGAGCCGAGAGCGCGACTCCCACGGCGATCGTACGGATGACGAGATGCGCGACTGCGACTCCGTCGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCGATTGCAGCGCGCCTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCGGAGCAGCAAACAGATCTGCCACTCAGccATCATCACCAACTGCCGCCGAATCATCCGCTTAATGCGCTGGGCAGCTTCATGGGCATCAGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTTCTCGAGAAGCTCAAGATGCAAGTGCGAGACATGAAAGTGGGCCTCATGGAACAGGATTATGCAGCGGCGGCGCACGCAGCCGCCTTTGGCGCCAACATGCTGCCCACCACCATCAGCAGCGCCTTTCCGCTGACCCACAATCCGGTGGCGGCGGCCGCGGCAGCCGCATCGTTTGGCCATGCGGCGGCGGCCAGTGTGACCGTACCGCCAGCCAGCAATGGTGCCAGCTACAATGGCGCCGCCAGTGGAGGCCCCAATGTTCAGCCGGGAGTAAGTGCATCTGCAGCAATTGGCAGCAGTGCCAGCAACAATGGAACAAACAGTGGCGGTAcaggtgttggtggtggtggcaatGCAGGTGGTGCCGGAAGTGGtggcaacaatagcaacaatgcCGCGGGCAGCGGGCATCCCTTCTCGTTTGCATCGCCGACAGCGCCGAGCGCCAAAGAAGCGCGCCAATTTACAGCTAATTCGGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGTTGTATGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTCGAcgatttgttttcgtttatgCAAAAGCGCGGCACGCCCATCAATCGCCTGCCCATTATGGCCAAATCGGTGCTGGATCTGTACGAGCTATATAATCTGGTGATAGCGCGCGGCGGACTTGTCGATGTTATCAACAAGAAGCTATGGCAGGAGATAATCAAAGGACTCCACCTGCCGTCGAGCATAACCAGTGCCGCATTCACGTTGCGTACCCAATACATGAAGTATCTGTATCCGTACGAGTGCGAGAAGAAGAACCTCAGCACACCAGCCGAGCTGCAAGCGGCCATTGATGGCAACCGGCGCGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGacGCCCATTTCGCGGCCACAGCTGCCTGGTGGCATGCAACAGATGTCGCCGTTGGCACTGGTCACACACGCCGCAGCGGCCACCAATCAGCAGGCGCAGGCAGCGGCCGCGGCTGCGGCAGCGCACCGCCGACTGATGGGCGGACCGCCTTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATCGAGAACCGGATGATGGAGTATCTGCAGCTGATACAGGCCAAGAAGGAGCAGAGTGCGTCAGTGCCACAcacccaccagcagcagcagcagcagcagcaacagcagcagcaacaacaacagcagcagtcgctgcaccatcaccagcaacagcagcagcagcagcagcggcagcgttcGCAAAGTCCCGAGCTGAGCACGCGCGATGCGCTCAGTGCACAGGTGGCGCTGTGGCACATGTATCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAGCGCGAAGCTTTGAACCTCTCCGATTCGCCGCCAACTCTCAATTTGAATCACATAAAACGGGAACGCGAACGCGATCCAACGCCGGAGCCGGCGGACAACGAGGAGACAGCACACCAGTCGCCGCCGGCGAAACGTGTGGGCAGCGGCCTGATGCCGCCCGGTTTTCCCGCCAACTTCTATTTGAATCCACACAATATGGCCGCCGTTGCAGCCGCCGCGGGCTTCCATCACCaggcgaacagcaacaacaacaacagcaaccacctGAACcaccatcatcaccatcagcagcagcagcagcaacagcaacagcagcagcagcagcagcatgatGCAGCATCCGATGGCGAACCAGAGGATGATTTCGCCAATGCGGAGCACAACACAACCGGGAATTCGTCGTCCATGCAGGAGGACATTGAGCCGCCGCAGCTGAATGGACACcaccatcatcaccatcatgaCGACCACCATgaccaccatcatcatcatcatcaccatcagaACCATCTGGACAAATCGGATGACTCGGCCATTGAGAACTCGCCCAGCACCTCCACAACGGCATCGGCGTCGGGCGGGCATCGCCACAGCTCGCCGGTGTCCACCAAGAAGAAGCCCAGCAAGGAGGACAACGGCACGGGCAGCGTGtccagcagcggcggcggtTTCCAAGTGGCACGCAACGGCACCGGCGCCAACGGCGAACAGCAGTTGATTGTCAATCTGGCCCTGAACGGCATTAAGTACTCGGGTGTCCTGGTGGCCAATGCGGCCCGGCCAGCGTGCACCGAAGACACTGACACGCCCACCACGGCCGCCGCCAGCGAGGAACCAGCGGAGGCGGAggccgaggaggaggaggagttgGAGGAGGCCAAGCACGAGAGCCGAGAGGAGGAGCCCAACGAGGAGGAAACAGCACAGGAGCAGCAGACCACGGATGACATTGTCAATGGCGGCAGTTTAGGAACGGGAATTGCGGGTGCGGGGGGCAAtggaagtggaagtggaaATGTGGGCGTATCCCTGCTTAAAGACGCTGTGGTCAGTTCATAA
- Protein Sequence
- MRQYVPCYGHKEDGGAHGEDRSEGDGRTVKAKAEAKAEAEAVATKPSRERDSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLTHNPVAAAAAAASFGHAAAASVTVPPASNGASYNGAASGGPNVQPGVSASAAIGSSASNNGTNSGGTGVGGGGNAGGAGSGGNNSNNAAGSGHPFSFASPTAPSAKEARQFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPQLPGGMQQMSPLALVTHAAAATNQQAQAAAAAAAAHRRLMGGPPFGQMPNLVTQEIENRMMEYLQLIQAKKEQSASVPHTHQQQQQQQQQQQQQQQQQSLHHHQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADNEETAHQSPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSNNNNSNHLNHHHHHQQQQQQQQQQQQQQHDAASDGEPEDDFANAEHNTTGNSSSMQEDIEPPQLNGHHHHHHHDDHHDHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKPSKEDNGTGSVSSSGGGFQVARNGTGANGEQQLIVNLALNGIKYSGVLVANAARPACTEDTDTPTTAAASEEPAEAEAEEEEELEEAKHESREEEPNEEETAQEQQTTDDIVNGGSLGTGIAGAGGNGSGSGNVGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560821;
- 90% Identity
- iTF_00547140;
- 80% Identity
- -