Basic Information

Insect: Drosophila paracracens
Gene Symbol: -
Assembly: GCA_035044025.1
Location: JAWNMN010001071.1:236188-241245[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0054 0.35 11.4 2.9 2 23 145 166 144 166 0.97

2 12 0.00013 0.0085 16.5 1.3 1 23 406 428 406 428 0.98

3 12 3.1 2e+02 2.7 0.8 1 23 434 457 434 457 0.92

4 12 9.3 6.1e+02 1.2 0.3 1 23 486 509 486 509 0.89

5 12 0.004 0.26 11.8 2.1 5 23 779 797 776 797 0.92

6 12 0.046 3 8.4 1.4 1 23 803 826 803 826 0.98

7 12 0.0029 0.19 12.2 0.7 1 23 906 929 906 929 0.97

8 12 0.011 0.72 10.4 0.4 1 23 1080 1103 1080 1103 0.92

9 12 0.00032 0.021 15.2 3.0 1 23 1117 1139 1117 1139 0.98

10 12 0.0015 0.098 13.1 4.0 2 23 1171 1195 1170 1195 0.90

11 12 0.043 2.8 8.5 0.3 1 23 1200 1222 1200 1222 0.97

12 12 0.0042 0.27 11.7 1.4 1 23 1228 1251 1228 1251 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0054	0.35	11.4	2.9	2	23	145	166	144	166	0.97
2	12	0.00013	0.0085	16.5	1.3	1	23	406	428	406	428	0.98
3	12	3.1	2e+02	2.7	0.8	1	23	434	457	434	457	0.92
4	12	9.3	6.1e+02	1.2	0.3	1	23	486	509	486	509	0.89
5	12	0.004	0.26	11.8	2.1	5	23	779	797	776	797	0.92
6	12	0.046	3	8.4	1.4	1	23	803	826	803	826	0.98
7	12	0.0029	0.19	12.2	0.7	1	23	906	929	906	929	0.97
8	12	0.011	0.72	10.4	0.4	1	23	1080	1103	1080	1103	0.92
9	12	0.00032	0.021	15.2	3.0	1	23	1117	1139	1117	1139	0.98
10	12	0.0015	0.098	13.1	4.0	2	23	1171	1195	1170	1195	0.90
11	12	0.043	2.8	8.5	0.3	1	23	1200	1222	1200	1222	0.97
12	12	0.0042	0.27	11.7	1.4	1	23	1228	1251	1228	1251	0.97

Sequence Information

Coding Sequence: ATGGCGCACAATCATTTGAAAGCAGCGGACATGgaaatcaattacaaattcGCATGTCGCTGTTGCCTCAAATCCGAGGCGGAATTCTTCAAGTTGGACTCTCTCATCGACTGTGGCAACGATGATGCCAATGATGATAACAATGATGCCTCGTCCCCAAGTAAATTGCCCCTGTTGCGTTTACTGCTCTTTTGCATGCGCACCGAAAATCTGCCCGAGCTGCCGCAATACATTTGCGTGGATTGCCgcaaaagtttgcaaattgCCTACTATTTCATACAAAACGGTTTGCGTGCCCACGAAATATTGTGTCGTAAACTGTGTCCCGGCAAGCTGCAAACCAAACCGCGCATCAACGGACAACACTTAGCCCTAAGGATCGAGACAAAAGCTGGCGCAGCGTTGCTGGACACGCACAGGGAGAAACCcctaaaatgcaaaatatgcgGTGAGATTATCCACAATCGTCTGGAGCTCAAACATCATCAACGAATGCATTCAGAGTCTCGACATCAGtgtaaattgtgcaattttgtAACGCTTAAGCATCGCCAGCTGCTGGAACACTATCGTAAATCGCATGGCTTGACAACGGCCCAAATTGAGCATCAGTTGAAATTACGAAAATCGCTGCAGGCGGCTGccagtgcaacaacaacaagaaaagccACAGCAGCTTTATCCACAGAAGCGCCTGCTCCTGCGGATGATGATGGTCAGGTAAAAGTGTGCACAAAGGAGGACATGGAGCTGCTGATACCCACAGTGTTGAGGCCCGAGGATTTCACGTACCCACAACTGGATGCGGATCAATTGCGTGACATTGAACAGCAATTGACGAGTAGCTCGCTGGGATTTCCAAACCCCACAGCTGCATTCACGGAACCAGTGACGGCAAATGCCAGCGGAAGCAGTGCCAATATGAGCATAGGTGCGGAGTTTCTGGTCTTACCGGATGGCACGTTGCAGCAGGTGAATGATGCTGGCGTTGTCTTCGAATATATTGATGATAGTAAAAATACGGCCAgcacagtaacagcaacaaccacatcgACCAATGTGACGCTGGAAAGCCTGTTGAGTGACTCGAAAACCGATTTAACCTATGATTCAATGGCCATTAATCTGAGTCACATGGCTGTCGATAATGCGCTGCCACAGATAACAGTCAAGCCCAAGGCACGACCATTGCTATCATCAACTGGTGCTCtgaaacacaaatgcaaactgTGCCCCAAAGCATTTCCGACGGTGGCACGCCTCAAATCTCACCAGCTAACGCATAGCCATTTACCCAAATTCTATTGTGATCAGTGCACATATTATTCGCTGCGCAGCGCCGATCTCATCCAGCATTATACGAGCGAGCATAATGTATGCATTAGCGATACGAAAGCTAGTCAAGTGGAAAAGTCACCAATGCTGACGGCAATGTTAACGGATCGCAATCGCATCTTCTCTTGCGATATGTGTCTTTTTGAGACGCCGAGCGGCGCTCAGCTGCGCTTGCATTATAGTGATAAGCATCTCATTGTGCCCAGTGAGATACAGCTGCGTCCCAGCTGGATCAGGGATCAGCAGGATGGCAATGCGAAACTGAAAAGTGGCGACGGCACCACAACACCAGACATTCCTCTGGGCATTAAATATCCAACCGTGACGCAGtgtgcagcagccacaacggcggcgacaacaacaacggctgTGACTTCAAAGGGTGGCATCAATGTCGTCGTGGATGCCAGCTCTTTATTCtatgcagcaactgctgccgaAAATGTAGCACCAACTGgtggaacagcaacaacaacaacgggcgCAACATCAACAGATTCAAGCACAATTGCAATATTTCCAGAGCAATGcctgtcaacaacaacaacaaccatagcAAAGGCAGCATCAACAAATCCACAGGAAGCAAGCAGTcaggcagtggcaacaacaacagcaacaaacaccaaTACTAGCACGTTTGGTGATATGCAGGAGTTTATAGATAATACAGATGTGGCAGCCATATGCACAATACCCGCCGACGATATGCCTGTGGATGGTGATGATATCGTcatcgataataataatattagtcTGGATTTTGATGCTGAAAATCTATTTGAGGAATTTGAAGATGTCGAAGTTGGCGAAGAGGTTGACGATGTCGACGCTGACGAAgatgacgaggatgaggatgaggatgatgcggataatgatgatgagaaTGATAACAATGATGCGGCTGCCGATCAAAATCTATTGCTAACcagcgacgatgacgatgtgGATGACTTTGACGACGAACAATCGAAGCATCTGCAGAAACCctattgcatattttgcaacaaaaagtttACCAGCCAATACAAGTTCGAGAATCACATGTTTGTGCATCGCGGTTTGGCACCATATCGCTGTGAGCTGTGCACCAATCTGTACAATATGAAACGCCTGCTCATACGACACTATAAAACAGTTCACAAAAAGATGCCCACGCGGGACATGGTGCAGGCCAAGGGCGACAAGGTAGACGTACAGTGTGCGGCTATCgaaaagataaatataaatgcggGCAAAAatcCCTTGCTGATGTGCGCCAAGTGTCCCTTTGAAGGTGAGCTGGATGTGGATATGCGCAAGCATTTAAATGCCCATCATGGCATCAACGATGGTGTTTCCATGCATGCCAACGAAGTGTTTATCATACGCAAACTGCCTTATGAGTGTCCACGCTGTATTCGTTCATTTGCGGCAAAGCGAACGTTGACACGCCATTTGCAGCGTAGCCATTTGGTGGATACAATCATTGAAATGCAGGCGCTGCAATTGACAACCAGTTCGGCGGCAACGACAACCacagcgacgacaacaaccacattgCCTAACAATGCCAGCGATGGCAGTACAGCTCCAGCACATGCGGTTGAGAAGTCGTGCAACAAGAGCAATATCGATGTTGGTCTTGGCGATAGCGGCCATAAAAAATGCGaCTTTACACCAACAACGCAACAGTCTGCAGTCTCATCGCTTTTTCCAACGCCCACGCCTTTTGACTTTGATCTTGACTTCATTGGCAACGTGGCAGATGCCACAACGctgaagaacaacaacgatgatAGCTTCAATGTGGCATCTCTGCCTCCGCCTTTACTGCTAAATGGCAGCGATAAGTTGCTGACTGCCGCTCTGGAGCCGTCGCCCGTTAAGGATTTGCGTCCACGTCTGCCCCGTACCCCCATATATGTGTGCAAGCAATGCAATCAAACGTTCGACGAGCTGGCCAAACTGTTGCAGCACGAGCTGCAACAACATTCCAGTGGCACGATGTCCACGCCACGCAGCAGCTATCAGCATCAATGCAAGATCTGTAATGCCTCCTATCGCACTGTGACCCTGCTCAATTATCACATGAAGCGACATGCGCCGGTCAAAGTGCCCTGCAAGGAGTTTCAAGTTAGCACGGAGTTGGAGCAACATGTTCCGTCCGATCATCGTGGCAATAGTGGTCCACTCAAATGTGGCATCGATGGGTGTAGGAAAACCTTCAATTACAAGCATCATTTGAAGCGACATCAGACCGCATCGCATACGCCTGTGCAATATATTTGTTCGGTGTGCGGACGAGATTTGCTGACCAGTCTGTATCTGAGGAATCACATGTCCATGCACAGGGGCACCCACTCCTACAAGTGCCCCAAGTGCGTGCGCACCTATATGCGCCGTAATCCTTTCCGTCGACATGCGATGCGGGAACACAAATGGGAGTTGACGGATGCGGAAATTGATAAAATGTATTGTGAAAATGATTCAACGCCATCAATAATATTGCGCGATTTGCGGTGA
Protein Sequence: MAHNHLKAADMEINYKFACRCCLKSEAEFFKLDSLIDCGNDDANDDNNDASSPSKLPLLRLLLFCMRTENLPELPQYICVDCRKSLQIAYYFIQNGLRAHEILCRKLCPGKLQTKPRINGQHLALRIETKAGAALLDTHREKPLKCKICGEIIHNRLELKHHQRMHSESRHQCKLCNFVTLKHRQLLEHYRKSHGLTTAQIEHQLKLRKSLQAAASATTTRKATAALSTEAPAPADDDGQVKVCTKEDMELLIPTVLRPEDFTYPQLDADQLRDIEQQLTSSSLGFPNPTAAFTEPVTANASGSSANMSIGAEFLVLPDGTLQQVNDAGVVFEYIDDSKNTASTVTATTTSTNVTLESLLSDSKTDLTYDSMAINLSHMAVDNALPQITVKPKARPLLSSTGALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCTYYSLRSADLIQHYTSEHNVCISDTKASQVEKSPMLTAMLTDRNRIFSCDMCLFETPSGAQLRLHYSDKHLIVPSEIQLRPSWIRDQQDGNAKLKSGDGTTTPDIPLGIKYPTVTQCAAATTAATTTTAVTSKGGINVVVDASSLFYAATAAENVAPTGGTATTTTGATSTDSSTIAIFPEQCLSTTTTTIAKAASTNPQEASSQAVATTTATNTNTSTFGDMQEFIDNTDVAAICTIPADDMPVDGDDIVIDNNNISLDFDAENLFEEFEDVEVGEEVDDVDADEDDEDEDEDDADNDDENDNNDAAADQNLLLTSDDDDVDDFDDEQSKHLQKPYCIFCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKKMPTRDMVQAKGDKVDVQCAAIEKININAGKNPLLMCAKCPFEGELDVDMRKHLNAHHGINDGVSMHANEVFIIRKLPYECPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQALQLTTSSAATTTTATTTTTLPNNASDGSTAPAHAVEKSCNKSNIDVGLGDSGHKKCDFTPTTQQSAVSSLFPTPTPFDFDLDFIGNVADATTLKNNNDDSFNVASLPPPLLLNGSDKLLTAALEPSPVKDLRPRLPRTPIYVCKQCNQTFDELAKLLQHELQQHSSGTMSTPRSSYQHQCKICNASYRTVTLLNYHMKRHAPVKVPCKEFQVSTELEQHVPSDHRGNSGPLKCGIDGCRKTFNYKHHLKRHQTASHTPVQYICSVCGRDLLTSLYLRNHMSMHRGTHSYKCPKCVRTYMRRNPFRRHAMREHKWELTDAEIDKMYCENDSTPSIILRDLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00557462;
90% Identity: iTF_00496942;
80% Identity: -