Basic Information

Insect: Drosophila oshimai
Gene Symbol: -
Assembly: GCA_018150695.1
Location: JAECWM010000051.1:174819-177878[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.8e-05 0.005 17.2 1.1 1 23 204 227 204 227 0.93

2 17 0.0028 0.21 12.1 0.2 1 23 234 256 234 256 0.97

3 17 0.2 15 6.3 0.1 2 23 288 309 287 309 0.94

4 17 0.00062 0.046 14.2 2.2 1 23 399 422 399 422 0.97

5 17 0.23 17 6.1 0.6 1 19 429 447 429 450 0.93

6 17 0.064 4.7 7.8 6.4 1 23 459 481 459 481 0.95

7 17 6.6e-06 0.00049 20.4 0.4 1 23 488 511 488 511 0.97

8 17 0.00037 0.027 14.9 2.4 2 23 519 540 518 540 0.96

9 17 0.017 1.3 9.6 0.1 2 21 567 586 566 587 0.94

10 17 0.0076 0.56 10.7 2.6 1 23 636 659 636 659 0.98

11 17 0.16 12 6.5 0.7 1 23 696 719 696 719 0.93

12 17 0.00012 0.0089 16.4 1.6 2 23 752 774 751 774 0.95

13 17 0.00036 0.026 14.9 0.1 1 23 788 810 788 810 0.95

14 17 1.7e-05 0.0013 19.1 1.0 1 23 816 838 816 838 0.99

15 17 3.1e-07 2.3e-05 24.5 2.6 1 23 844 866 844 866 0.98

16 17 3.5e-05 0.0026 18.1 3.8 1 23 872 894 872 894 0.97

17 17 2.4e-05 0.0018 18.6 0.5 1 22 900 921 900 924 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.8e-05	0.005	17.2	1.1	1	23	204	227	204	227	0.93
2	17	0.0028	0.21	12.1	0.2	1	23	234	256	234	256	0.97
3	17	0.2	15	6.3	0.1	2	23	288	309	287	309	0.94
4	17	0.00062	0.046	14.2	2.2	1	23	399	422	399	422	0.97
5	17	0.23	17	6.1	0.6	1	19	429	447	429	450	0.93
6	17	0.064	4.7	7.8	6.4	1	23	459	481	459	481	0.95
7	17	6.6e-06	0.00049	20.4	0.4	1	23	488	511	488	511	0.97
8	17	0.00037	0.027	14.9	2.4	2	23	519	540	518	540	0.96
9	17	0.017	1.3	9.6	0.1	2	21	567	586	566	587	0.94
10	17	0.0076	0.56	10.7	2.6	1	23	636	659	636	659	0.98
11	17	0.16	12	6.5	0.7	1	23	696	719	696	719	0.93
12	17	0.00012	0.0089	16.4	1.6	2	23	752	774	751	774	0.95
13	17	0.00036	0.026	14.9	0.1	1	23	788	810	788	810	0.95
14	17	1.7e-05	0.0013	19.1	1.0	1	23	816	838	816	838	0.99
15	17	3.1e-07	2.3e-05	24.5	2.6	1	23	844	866	844	866	0.98
16	17	3.5e-05	0.0026	18.1	3.8	1	23	872	894	872	894	0.97
17	17	2.4e-05	0.0018	18.6	0.5	1	22	900	921	900	924	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCGGTGATTTGTCGCACCTGCGACTCCACGGACACCGACAACCTTCTGAAGCTGGGCACGCCCTCAAAAAAGTATCCTGACAAACTGCTCTCGGAGATCTTGGGCGAGCTTACGGAAATCAATCTAAATGAAACTGCAAGCCAGAAGCTCCCGCAGTGCTTGTGCAGCGGCTGCACCAAGAAATTACTGGGCGCCTACTGCTATGTGAAGCAGGCGCTGGCCGCCAACGAGTTACTGATGAGGCACCTGAAGAACGGAGCTGCCTCATCCACCACCGACTGTCTGCAGGAGGCGCCCATGGAGATCTGCGCCGAGCAGCATGTGGAGGTTAAGATGGAGACAGAGGACGAGGACTGTGGCGACAACGATGTCAGCATTACTTGCTCCGATTTGCCGGAACCGGACGAATTGGATGTGGAGAGCAAGAAGTCCGTTGATCCTCTGACCATGATTGAGGGTGTAAAGCTGGAAACGGAACCGCGAAGCGTTGAAAAGCCATTAGAATACGAGCCCCCGTCCGACTTTGAAGATGAAGACTCCCTGGATAGCCTACCCCTGGACAAGCGCATTCAAAAGTGGAAGATGGGGAGGAAGCCCATATTCAAATGTCAAGAGTGCCCGAGGAGTTTCAAGCGAATCGAGTTCTTAAAACGACATGAAGTCCGAGTCCACAAGCCGGATACCCGCTTGTTCGCCTGCTCACTCTGCATTCGTAAGTTCAGTCGCAGCGAAGCCCTGGATGCTCACCTGAAAGTCCACCGGAACTCCAAGCGATCGGCCAACATTAGCGAGCATAAAAAGGCCAAGGCGGTTGATCTGAATCTCTGCAAGCCACACGGCTACAAGCTTATCGAGTGCATGATCTGCCAGAGCCAGTACAACAAGATTGCCGATCTGCGGCGGCACTTGGAGGAGCATCCTGAGATAGTCAGCCTGCTCGGTCGCCCAAATGTGGAGCCGCACGAACTGGCGGAGCTGTTTTATCCCGACTCCAAGGACGTCGGCGAGGAGCAGTTGATCAGCTTGATTCGCAAGGATCTGGCGGCGGGCATTTATCAGCGTTTCTATTCGATTACCAACCAAAGTGGCTACGAAATGGACCTGGACAGCTCGGAGACGGACAGTGATCTGGACGGAGACCCCGAGGATCAGCTCAAGAGGCGAAAGAAAAGCCGCAAGGCCATCTACAGCTGCGAGCTCTGCCAGAGCAAGTTCCCGCGGAAATATCAGCTATACGACCACCAGCGACAGACACACAGCTGGTCAGAAGCTCCTCATGTGTGTGGGCGGTGTGATGGACGCTTCGTGAGCTTGCAGTTGCTACGGCACCACAACGAATCGCAGTGCAGAAATGCACAGAAGCGCTTCCTTTGTCACAAGTGCCCGCTCCGCTTTCGCTGGAAGCACAACCTAAAAACACATTTCCGCGAGCACAGGATTACAAATCAGACGTTTGAGTGTCCTGAGTGCAAACGGGTCTTTGACAAAAAGAAATCCCTCACCGTTCACCTGCTCAGCGTGCATGCAGAGGAATCGAAACTCATTCCCTGCCAGTGGTGCAGTCGCAAGTTCTACCGACACGACTATCTGGTAAAACACCTGAAACGGCACGGACTCAGGGAGCAAGATATTCCGCTGGCCGAGACTTTGATTGCGGCTACCTCCCGGCCGAACGGAGCTAAGCGCATTACCTGCCGGATGTGCAACCTGCACTTTGAACGTATTGTGGATCTGCGAGCCCACATCCAGCTGGAGCTGAAGTTGTCCCTGTCGCTGCACCAGAGCTACGATTCCCTGCACAATTATTCAATAACAAACGAGTCCGGCTTTGAGCTGCAGCTGGAGGATTCGGAAACGGAGGACGAGATGCAGCATGGAAGTGGCAGTCGTCCCGTTTATATCTGCGAGCTGTGCAGCGTGCAGTGCAAGCGAAAGTTCGAAATGATCCAGCATCAGCGGACGATGCATCGCTTTGACAAAATGCCACACGAGTGCGATGATTGCATCTTCAAGTGTGTGTCCAAGAGTATTATGGACCACCACCGGTTGGGTCAATGCAGTAGCACAGAAAAGAAGCATTCTTGCGGCAAATGCTCCTACAAGTTTATGTGGCCAGAGAACTTGGAACAGCACGTTCTACTTCAGCACAATGAGTCCTTCACCAGCAATCCGTCAGGCGTTAGCCGGAAAACTGGTCCCGGCGACCTGGACAAGGATGCCGCCGAGGACGGAGTGCCGCTGCTGCAGTGTCCACATTGCGACCGCACCTACCAGATGAAATCGCGCCTGAACAACCACATCCGCGATGTGCATGTTAACGGCGACCGCAAGCGCAAAGAGGCGATCAAGCGCTTCCTCTGCTCCCTGTGCGGCATGGAGACACGATCTGCAGCCGCCCTTGTGACTCACATGCGTCGCCACACCGGCGAGAAGCCATTCAAGTGTGATCTGTGCGAGATGGCCTTTCCCAGGCATTCGGAGCTTGCCTCGCACCGCCGGATGCACACCGGTGAGAAGCCATTTCACTGCACGGTCTGCGGCAAGGACTTCGCTCGATCCGACAAGCTCAAGCGTCACATGCTCACCCACAGCGGCCTGAAACCACACAAGTGCACCTACTGCGAGAAGAGCTACCGCCAGGCCAAGGACCTGAAGCTCCACCTGCAGCAGCACACCGGCGAGTGCCCGTTCGTGTGCGGCACCTGCGGCGAACGCTTCATCCAGAGCAGCACGCTGGAGAAGCACCGCCTGATGCGTCGGCACTTCGACGAGGTGGAAGTGTGGCTGAGGCGTCAAAAATAG
Protein Sequence: MKLPVICRTCDSTDTDNLLKLGTPSKKYPDKLLSEILGELTEINLNETASQKLPQCLCSGCTKKLLGAYCYVKQALAANELLMRHLKNGAASSTTDCLQEAPMEICAEQHVEVKMETEDEDCGDNDVSITCSDLPEPDELDVESKKSVDPLTMIEGVKLETEPRSVEKPLEYEPPSDFEDEDSLDSLPLDKRIQKWKMGRKPIFKCQECPRSFKRIEFLKRHEVRVHKPDTRLFACSLCIRKFSRSEALDAHLKVHRNSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHPEIVSLLGRPNVEPHELAELFYPDSKDVGEEQLISLIRKDLAAGIYQRFYSITNQSGYEMDLDSSETDSDLDGDPEDQLKRRKKSRKAIYSCELCQSKFPRKYQLYDHQRQTHSWSEAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFECPECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLREQDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSLHNYSITNESGFELQLEDSETEDEMQHGSGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRLGQCSSTEKKHSCGKCSYKFMWPENLEQHVLLQHNESFTSNPSGVSRKTGPGDLDKDAAEDGVPLLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDEVEVWLRRQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00581676;
90% Identity: iTF_00604984;
80% Identity: -