Dosh013909.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000001.1:8951387-8954176[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-117 1.9e-113 378.7 21.4 1 299 30 319 30 320 0.95 2 2 0.02 3.5e+02 0.2 3.3 209 242 338 370 322 394 0.58
Sequence Information
- Coding Sequence
- ATGGAAAGCATAAGCACTCCTGGTCGACGACGGAACAACATGCGAATCAATGCGGAGGATAATGCGCTAGACCAAATTACAAAAGAGGCCGAAGCTCGACTTGCGGCGCGTAGACAAGCCCGTGCTGAAGCCCGGGAGATACGGATGAGGGAGCTCGAGCGACAACAAAAGGAGCAGGAAATAAGCGCTGACCGTGTGTTCGACATGCACAACGCCACTGGAGTGGGCGCCGATGCAATTTCGCCGCATCCTGTCCGTCTTGTCTACGGGGGCATGTTAAATGTAGGCCGCGCATCAGCATCTCGCCGAAGTAGCGAGGATTCTGTGGAGGATGAAGGACGGAGTTTTCGTGACTTCAAACACGAGCTTAAAGATACGGAAGAACGGTTCCGGAAAGCAATGATAACGAATGCCCAATTGGACAACGATCGTGCCTCTCAGGCTTACGAAGTGAAATTGCTCAAGGACAAATGCGAAATCATGGAAGAGTCGTTTGCACAACTGCAGCGCGAGTTCAAGGAGAAGATGCGTGACTGCAATGCCCTCAAGCGAAACCTGGACCGCGCAACCCTTGAGCTGAAGTTAGTACAAGGACAGTTAAATGAGCGCGACACGCTGATATCGGAACAGGGTCTTCTGATTGTAGCAGTTGAAAACGCTGACGGCAGCGATGCTAAAAGAGCTCTAGTGAGCGTTGAAAATGCAAAAGTTCTGGCGTCCGTTCAAGGTTCTTTAGATGTAAGACTGAAAAAGTTTAGTGACGAGAAACAGCGACTGCTATCTGAAGTGCACAAGCTTCACGAACAGCTTGAAGAATATAAAGTTGAGGGAGGGATCGGACGTGGCAGTCTGCATGGTTCCTTCGGTGATGACGATGAGTACGAGGCCCAAAGGGAATCAAACAAAATCATTTCAGACCATAAATATAAGCTGCAAAAGGCCGAGCAGGAAATAGCCAATTTACAATCGAGCTTAGCCCGTTCAGAGACTCAAGTCATCCGATACAAAAGCACGGCGGAAGCCGCCGAAAAGGCCGAGGCAGAGCTGAAAGTCGAGCGCCGTAAGCTGCAACGCGAGCACCGGGAAATTTTGGAAAAACTGGAAGAAGCAGAGACGGCAAACAGCCATTTGTTGAAACGCCTCGATAAGTTGAAAAACGCCAAGAGTGCCATTCTGAAGGACTTATGA
- Protein Sequence
- MESISTPGRRRNNMRINAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKEQEISADRVFDMHNATGVGADAISPHPVRLVYGGMLNVGRASASRRSSEDSVEDEGRSFRDFKHELKDTEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEIMEESFAQLQREFKEKMRDCNALKRNLDRATLELKLVQGQLNERDTLISEQGLLIVAVENADGSDAKRALVSVENAKVLASVQGSLDVRLKKFSDEKQRLLSEVHKLHEQLEEYKVEGGIGRGSLHGSFGDDDEYEAQRESNKIISDHKYKLQKAEQEIANLQSSLARSETQVIRYKSTAEAAEKAEAELKVERRKLQREHREILEKLEEAETANSHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00602585;
- 80% Identity
- -