Dnov011576.1
Basic Information
- Insect
- Drosophila novamexicana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003285875.3
- Location
- NW:3471455-3541360[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-06 0.0062 15.7 0.0 2 32 349 379 348 386 0.91 2 4 1.6 3.4e+03 -2.6 0.0 4 19 546 567 545 569 0.82 3 4 3.7 7.9e+03 -3.8 1.2 5 13 664 672 664 676 0.85 4 4 6e-19 1.3e-15 56.4 0.0 1 43 830 873 830 875 0.95
Sequence Information
- Coding Sequence
- ATGGCCGACTGCTCATTTGCCAGATGCCAGCAGGAGCGTCGGCTCATCAAGCGCGAACTAATGAAGTGGTCCAAGGATATGCTGCACATTGTGGGCTTAGAACGCGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAACCAATTGAATATCGCAGAGCAACAGCCCATATCAATAACGACAGAAGCAGAAGACAGCAAACACAAGCAGAGCCACCGCGAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAAcatttcaacaacaacaacagcggacCGCTGCCATTTGAAAGCGATTTTGACAACAACCATACATCACAAAACCACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTAAACGCCAAAGGCGAATTGGTGGCCGAAACAACGGCAATCGcgtccagcaacagcaacaacaacaacggcacaGCTGTGCACCAGcacgacagcgacagcaattCGAGCGCATCGCTGCACAATAGCAgcagaaataacaacaacattaacaacaacaacaacagcagcatcaacaagcATAGAGCACGCAACGCCGCTAACGCCGCCACGACGTCGTCGTCAACAACTTCTATAGAACTTTACAAGCTGCTCACCCAGCAAGCAGCTGAAATGACATCAATGGAATCGATGGCCGCCAAGCTGGCACAGTTCAACATGATGGCCGATTTCAATTTGATGAACACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCGGAATCATCAGCCGCCGCTGGCAGTCCCACACTCAAGGATACGCCCAGTCCCAGTGCAGATGCACCATTGGATCTAAGCAGCAAGCCATCGCCAAATTCATCGATCAGCGGCGATATCAAGACAGCCAGAGCTCTGTCAGACTGCGCCACTCCCCTTGCAGCAGCACGCCACACGTACAGCAACGAGGATTTGAATAGCGTGCTGCAGGATGTGCTGGTCAATAAGCTGGGCACACGCAAAGCGGCCAGCCAGTACCAAGTGTCGCGCACCACGCAGCGCAATAAGCTGAGCAAAATGTCCTTAGACGGCAAAAGGACAAATGTGCCAACGCCGCCAGagctacaacagcaactgcagcacgAACTGGACCTAGACGAGCAGGATGAATCCGGCGAGGAGGCTGGCGAAGGCGATAGCAATGCGTCGACACCAGCGCCTGGCTTTCAGGAAATCGCCCAACGCATTGCAGCCACTGATCATCTGTGCAAGCTGAGCAGCATATCCGAGCACAATGGCAGCGAGCTGGGCGACGAGCTGGAATCAGTTATGTCGCCAAAGCCGACGCGTTCTCAGAGCGGCGGCACACCAACTGGACACATtccagctgcaacagctggcGGCAATGCCGCTGGACTGCCCATGCCCATCGATGCGCGTGTCCTGTTGCATACCCTAATGTTGGCAGCGGGCATTGGCGCCATGCCCAAGCTGGACGAGACGCAGACGCTGGGTGACGTGTTCAAAACGCTACTAATGGCCAACAGTGGCGGCATCATGAGCGAGGCGCTCGCCGGCGTTGTGACGCCCAGTCTGGAGAGCAACGGCAGCGTATCgttgctgcaacagcagcaacagcagcagcagctaaataatgttgctgcagttgccgcGTATCGTCGCCACCTACCAAAGTCTGAAACGCCTGAGACCAGCTCCTCATTGGAAGCCAATGAGGCATGCGAAGATCCCATACTGAAGATTCCGTCCTTCAAGGTCGGCGGTGCGCCCAGCGTCTCGCCCACGTtgcattgcagcagcagcagcaacaacaacaacaacaactctaacagcagcagcaaccgtaACGGCGGCGGCGATCACAGTCCACACTCCGCCTCACCAATGCTTGCAGCTGCTGTAGCCGCCGTCGCggccaacaacagctacaggcagagcagtagcaacaacagcggcaattTACTGTCGTCGTCGGCAACATCGATACAGAAGATGATGGCCAATACCATACAGCGCAAGATCAACGAGCAGGTCAGCCAGGACAGCCTGTTGGGTCTGGATAAgcgcaacaatggcaacacaAGCGGCAGcgagtgcagcagcagcggtggaggcggcggtggcggtggtggtggtggcggtgggAGCGGCAACGTCGGTAGAAAGCCCAGCATATCAGTGGCAAAAATCATTGGCGGCACAGACACCTCACGCTTCGGTGCCTCACCTAATCTGCTCGCCCAGCAACATCACGGCCATATGAGCGCCCATCATGCCcaccagcatcagcatcagcaccaGCATCAGCAGCTCAGTGCACAGGATGCCGCTGCACTGGCCGCCGGCAAGGGCACGCGACCGAAGCGGGGTAAGTACCGCAACTATGACAGAGACAGCCTCGTGGAGGCAGTCAAGGCCGTTCAGCGTGGCGAGATGTCTGTGCATCGTGCCGGCAGCTATTACGGTGTGCCACACTCAACGCTAGAGTACAAGGTGAAGGAGCGGCATTTGATGCGGCCGCGCAAGCGTGAGCCGAAGCCTCAGCCGGATCTTGTGGGACTGACAGGCGCAGCAAATAAGGTGACTTTGACGGGACTGAATCATCTGGATAAGCTGAAGTccggcagcagcaatagcagcagcaaccccAATAATAGTTCCGGCTCCAAGCTGAGCAACGCGCTGAAGAACAACAGCAGTGCGgtagctgcggctgcggcagcggcagcgcccaATGGCATGAAATTGCCCATGTTTGATGCCGCACCGCAGTTGTCCTTCCAGCCGAGCATGTTCTGGGCCCAGCCGAATGCCGGCGCCAACTATGGACTGGACTTCAATCGCAGTCCAGAATTTCTTAAGACGCACCTGGCCGAGGTGATGCGCAGCAGCCCGCTGGGCGTGGCCGCCAATCATCATGGCCATGGCGGCGTGCACATGACCAGCGCCGTGGACTTTGCCGAGAACATGTACGACGGCATCATACGGAACTCCCTCAAGAAGGATGGCGATGTAATTGCTGGGAGCGGCACTagcggcaatggcaatggcaatgcgcTGCTGGATCAGCTGCTGGTGAAGAAGACGCCACTGCCATTTACCAATAATCGTAGCAATGACTACATCAGCGCCGCCTGTTCCAGTTCCGAGAGCGTAAAGCGTCCGGGTAGCCCGCTGAGCGCCTATTCGGATATCAAGCGCGAATGCCTCAGTCCCATGCGCAGCGCCGAGAGTGCCAGCAGTGATGAGGATCATGAGCattccagcaacaacaacaacaacaacaacaatagcaacaacaacaacaacaacagcgacctggcgcacaacaagaacaacaacggcagcagcaggaacaccaacaagaacaacaacgggAATGGACGAAGCCGCATGACATCGCGCGACTCGGAAACGGACGCAAGCAGCTTGAAGAGCGAGCAATCGCACAGCCCGGCTCAGCTCGCCGGTTCTGGCAACAAAATGATGGATCTCAATGGCAGCACAGGTGTCAAATACGAGCTGGAGCCAACAGCAGCGCAAATCTCACCCAGCAATTCGATATTGCACGAGAAGCTGGCGCAGATCAAGGCCGAACAGGCCGATTGCAACGCACCCGAGGAGCAGTTATAG
- Protein Sequence
- MADCSFARCQQERRLIKRELMKWSKDMLHIVGLERVAEEFMGRRKWKHYQDQLTRNQLNIAEQQPISITTEAEDSKHKQSHREPLNHRLAQPNGQHFNNNNSGPLPFESDFDNNHTSQNHDSSATSRSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTAIASSNSNNNNGTAVHQHDSDSNSSASLHNSSRNNNNINNNNNSSINKHRARNAANAATTSSSTTSIELYKLLTQQAAEMTSMESMAAKLAQFNMMADFNLMNTLANQQHANSVTPTTSESSAAAGSPTLKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPLAAARHTYSNEDLNSVLQDVLVNKLGTRKAASQYQVSRTTQRNKLSKMSLDGKRTNVPTPPELQQQLQHELDLDEQDESGEEAGEGDSNASTPAPGFQEIAQRIAATDHLCKLSSISEHNGSELGDELESVMSPKPTRSQSGGTPTGHIPAATAGGNAAGLPMPIDARVLLHTLMLAAGIGAMPKLDETQTLGDVFKTLLMANSGGIMSEALAGVVTPSLESNGSVSLLQQQQQQQQLNNVAAVAAYRRHLPKSETPETSSSLEANEACEDPILKIPSFKVGGAPSVSPTLHCSSSSNNNNNNSNSSSNRNGGGDHSPHSASPMLAAAVAAVAANNSYRQSSSNNSGNLLSSSATSIQKMMANTIQRKINEQVSQDSLLGLDKRNNGNTSGSECSSSGGGGGGGGGGGGGSGNVGRKPSISVAKIIGGTDTSRFGASPNLLAQQHHGHMSAHHAHQHQHQHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVTLTGLNHLDKLKSGSSNSSSNPNNSSGSKLSNALKNNSSAVAAAAAAAAPNGMKLPMFDAAPQLSFQPSMFWAQPNAGANYGLDFNRSPEFLKTHLAEVMRSSPLGVAANHHGHGGVHMTSAVDFAENMYDGIIRNSLKKDGDVIAGSGTSGNGNGNALLDQLLVKKTPLPFTNNRSNDYISAACSSSESVKRPGSPLSAYSDIKRECLSPMRSAESASSDEDHEHSSNNNNNNNNSNNNNNNSDLAHNKNNNGSSRNTNKNNNGNGRSRMTSRDSETDASSLKSEQSHSPAQLAGSGNKMMDLNGSTGVKYELEPTAAQISPSNSILHEKLAQIKAEQADCNAPEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00506030;
- 90% Identity
- iTF_00490702;
- 80% Identity
- -