Dbor009621.1
Basic Information
- Insect
- Drosophila borealis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035045885.1
- Location
- JAWNOR010000194.1:13996626-14007323[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0032 7.2 6.7 0.0 2 26 308 332 307 346 0.88 2 4 2.7 6.1e+03 -2.6 0.1 4 19 508 529 507 531 0.83 3 4 6 1.3e+04 -3.7 1.2 5 13 631 639 631 643 0.85 4 4 9.6e-19 2.2e-15 56.4 0.0 1 43 795 838 795 840 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAACCAATTGAATATCGCAGAGCAACAGCCCATATCAATAACGACAGAAGCAGAAGACAGCAAACACAAACAGAGCCACTGCGAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAAcatttcaacaacaacaacaacaacaacggaacGCTGCCATTTGAAAGCGATTTTGACAACAACCACACATCACAAGACCACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTAAACGCCAAAGGCGAATTGGTGGCCGAAACAACGGCAATCGcgtccagcaacaacaacatcatcaacaacgGCACAGCTGTGCAGCAGcacgacagcgacagcaattCGAGCGCATCGCTGCACAATAGCagcagaaataacaacaacattaacaacaacaaccacaagcaTAGAGCACGCAACGCTGCTAACGCCGCCACGACGTCATCGCCAACAACTTCTATAGAACTTTACAAGCTGCTCACCCAGCAAGCAGCTGAAATGACATCGATGGACTCGATGGCCGCCAAGCTGGCACAGTTCACCATGATGGCCGATTTCAATTTGATGAACACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCGGAATTATCAGCCGCCGCTGGCAGTCCCTCACTCAAGGATACGCCCAGTCCCAGTGCAGATGCACCATTGGATCTAAGCAGCAAGCCATCGCCAAATTCATCGATCAGCGGCGACATAAAGACAGCCAGAGCTCTGTCAGAGTGCGCCACGCCCCTAGCAGCGGCACGCCCCACGTACAGCAACGAGGATTTGAATAGCGTGCTGCAGGATGTGCTGGCCAATAAGCTGGGCACACGCAAAGCGGCCAGCCAGTACCAAGCGCAGCGCACCATGCTGCGCAAAAAGCAGTGCAAAATGTCCTTAGACGGCAAAAGGACGAATGTGCCAACGCCGCCggaactgcagcagcagctgcagcacgaACTGGACCTGGACGAGCAGGATGAATCCGGCGAGGAGGCTGGCGAAGGCGATAGCAATGCGTCGACGCCAGCGCCTGGCTTTCATGAAATCGCCCAGCGCATTGTAGCCACTGATCATCTGTGCAAGCTGAGCAGCATATCCGAGCACAATGGCAGCGAGCTGGGCGATGAGCTGGAATCAGCTATGTCGCCAAAGCCGACGCGTTCACAGAGCGGCGGCACACCAACTGGACACATaccagcggcagctgctgcaacagctgGCGGCAATGCCGCTGGACTGCCCATGCCCATCGATGCGCGTGTCCTGTTGCATACACTAATGCTGGCAGCGGGCATTGGCGCCATGCCCAAGCTGGACGAAACGCAGACGCTGGGTGACGTGTTCAAAACGCTGCTGATGGCCAACAGTGGCGGCATCATGAGCGAGGCGCTCGCCGGCGTTGTGGCGCCCAGCCTCGAGAGCAACGGCAGCGTCTCgttgctgcaacagcagcaacagcagcagcagcagcagctaaatagtgttgctgcagttgccgcCTATCGCCGGCACCTACCAAAGTCTGAAACGCCTGAGACCAGCTCCTCGTTGGATGCCAATGAGGCATGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGTGCGCCCAGCGTCTCGCCCACGCtgcattgcagcagcagcagcagcaacaacaaaaacatcaacCACAActcaaacagcagcagcaaccgcaacggcggcggcgatCACAGTCCACACTCCGCCTCACCAATGCTTGCAGCAGCTGTAGCCGCCGTCGCGgccaacaacagctacaggcagaacagcagcaacagcagcggcaatttGCTGTCGTCGTCGGCAACATCGATACAGAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGAGCAGCCAGGACAGCCTGTTGGGTCTGGACAAGCGCAACAATGGAAACACAAGCGGCAGcgagtgcagcagcagcggcggcggcggcggtggtggtggtggtggtggcggtggcagcggcaacgTCGGCAGAAAGCCCAGCATATCGGTGGCAAAAATCATTGGCGGCACAGATACCTCACGCTTCGGTGCCTCACCTAATCTGCTCGCCCAGCAACATCACAGCCATTTGAGCGCCCATCATGCCCACCAGCATCAGCACCAGCATCAGCAGCTCAGTGCACAGGATGCCGCTGCACTGGCCGCCGGCAAGGGCACGCGACCGAAGCGGGGTAAGTACCGCAACTATGACAGAGACAGCCTCGTGGAGGCAGTCAAGGCCGTTCAGCGCGGCGAGATGTCTGTGCATCGTGCCGGCAGCTATTACGGTGTGCCACACTCAACGCTGGAGTACAAGGTGAAGGAGAGGCATTTGATGCGGCCGCGCAAACGTGAGCCGAAGCCGCAGCCGGATCTCGTGGGACTGACAGGCGCAGCAAATAAAGTGAATTTGACGGCACTGAATCATCTGGATAAGCTGAAGtccggcaacagcagcagcaacgccaACAACAGCTCCGGCTCCAAGCTGAGCAACGCGCTGAAGAACAACAGCAGTGCGGCAGCTGGGACAGCGGCAGCACCCAATGGCATGAAGCTGCCCATTTTTGATGCCGCACCGCAGTTGTCCTTCCAGCCGAGCATGTTCTGGGCACAGCCAAATGCCGGCGCCAACTATGCACTGGACTTCAATCGCAGTCCTGAGTTTCTTAACTCGCACCTGGCCGAGGTGATGCGCAGCAGCCCGCTGGGCGTGGCCGCCAATCATCATGGCCATGGTGGCGTGCACATGACCAGCGCCGTGGACTTTGCCGAGAACATGTACGACGGCATCATACGGAACTCCCTCAAGAAGGATGGCGATGTTATTGCTGGCAGCGGCACTagcggcaatggcaatggcaatgcgcTGCTGGATCAGCTGCTGGTGAAGAAGACGCCACTGCCATTTACCAATAATCGTAGCAATGACTACATCAGCGCCGCCTGTTCCAGTTCCGAGAGCGTCAAACGTCCAGGTAGCCCGCTGAGCGCCTATTCGGATATTAAGCGCGAACGCCTCAGTCCCATGCGCAGCGCCGAAAGTGCCAGCAGTGATGAGGATCATGAGCattccagcaacaacaacaacaacaacaatagcaacaataacaacaacagcgacctggcccacaacaaaaacaagaacggcaacagcaggagcaacaacaagaacaacaacaacgggaaTGGACGCAGCCGCATGACATCGCGCGACTCGGAAACGGACGCCAGCAGCTTGAAGAGCGAGCAATCGCACAGCTCGGCTCAGCTCGCCGGTGCTGGCAACAAAATGATGGATCTCAATGGCAGCACAGGTGTCAAATACGAGCTGGAGCCAACAGCAGCGCAAATCTCACCCAGTAATTCGATATTGCACGAGAAGCTGGCGCAGATCAAAGCCGAACAGGCCGATTGCAACGCACCCGAGGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQDQLTRNQLNIAEQQPISITTEAEDSKHKQSHCEPLNHRLAQPNGQHFNNNNNNNGTLPFESDFDNNHTSQDHDSSATSRSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTAIASSNNNIINNGTAVQQHDSDSNSSASLHNSSRNNNNINNNNHKHRARNAANAATTSSPTTSIELYKLLTQQAAEMTSMDSMAAKLAQFTMMADFNLMNTLANQQHANSVTPTTSELSAAAGSPSLKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSECATPLAAARPTYSNEDLNSVLQDVLANKLGTRKAASQYQAQRTMLRKKQCKMSLDGKRTNVPTPPELQQQLQHELDLDEQDESGEEAGEGDSNASTPAPGFHEIAQRIVATDHLCKLSSISEHNGSELGDELESAMSPKPTRSQSGGTPTGHIPAAAAATAGGNAAGLPMPIDARVLLHTLMLAAGIGAMPKLDETQTLGDVFKTLLMANSGGIMSEALAGVVAPSLESNGSVSLLQQQQQQQQQQLNSVAAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGAPSVSPTLHCSSSSSNNKNINHNSNSSSNRNGGGDHSPHSASPMLAAAVAAVAANNSYRQNSSNSSGNLLSSSATSIQKMMANTIQRKINEQSSQDSLLGLDKRNNGNTSGSECSSSGGGGGGGGGGGGGSGNVGRKPSISVAKIIGGTDTSRFGASPNLLAQQHHSHLSAHHAHQHQHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVNLTALNHLDKLKSGNSSSNANNSSGSKLSNALKNNSSAAAGTAAAPNGMKLPIFDAAPQLSFQPSMFWAQPNAGANYALDFNRSPEFLNSHLAEVMRSSPLGVAANHHGHGGVHMTSAVDFAENMYDGIIRNSLKKDGDVIAGSGTSGNGNGNALLDQLLVKKTPLPFTNNRSNDYISAACSSSESVKRPGSPLSAYSDIKRERLSPMRSAESASSDEDHEHSSNNNNNNNSNNNNNSDLAHNKNKNGNSRSNNKNNNNGNGRSRMTSRDSETDASSLKSEQSHSSAQLAGAGNKMMDLNGSTGVKYELEPTAAQISPSNSILHEKLAQIKAEQADCNAPEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00506030;
- 90% Identity
- iTF_00526499; iTF_00506030; iTF_00563096; iTF_00530875;
- 80% Identity
- -