Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_035045885.1
Location
JAWNOR010000194.1:13996626-14007323[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0032 7.2 6.7 0.0 2 26 308 332 307 346 0.88
2 4 2.7 6.1e+03 -2.6 0.1 4 19 508 529 507 531 0.83
3 4 6 1.3e+04 -3.7 1.2 5 13 631 639 631 643 0.85
4 4 9.6e-19 2.2e-15 56.4 0.0 1 43 795 838 795 840 0.95

Sequence Information

Coding Sequence
ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAACCAATTGAATATCGCAGAGCAACAGCCCATATCAATAACGACAGAAGCAGAAGACAGCAAACACAAACAGAGCCACTGCGAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAAcatttcaacaacaacaacaacaacaacggaacGCTGCCATTTGAAAGCGATTTTGACAACAACCACACATCACAAGACCACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTAAACGCCAAAGGCGAATTGGTGGCCGAAACAACGGCAATCGcgtccagcaacaacaacatcatcaacaacgGCACAGCTGTGCAGCAGcacgacagcgacagcaattCGAGCGCATCGCTGCACAATAGCagcagaaataacaacaacattaacaacaacaaccacaagcaTAGAGCACGCAACGCTGCTAACGCCGCCACGACGTCATCGCCAACAACTTCTATAGAACTTTACAAGCTGCTCACCCAGCAAGCAGCTGAAATGACATCGATGGACTCGATGGCCGCCAAGCTGGCACAGTTCACCATGATGGCCGATTTCAATTTGATGAACACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCGGAATTATCAGCCGCCGCTGGCAGTCCCTCACTCAAGGATACGCCCAGTCCCAGTGCAGATGCACCATTGGATCTAAGCAGCAAGCCATCGCCAAATTCATCGATCAGCGGCGACATAAAGACAGCCAGAGCTCTGTCAGAGTGCGCCACGCCCCTAGCAGCGGCACGCCCCACGTACAGCAACGAGGATTTGAATAGCGTGCTGCAGGATGTGCTGGCCAATAAGCTGGGCACACGCAAAGCGGCCAGCCAGTACCAAGCGCAGCGCACCATGCTGCGCAAAAAGCAGTGCAAAATGTCCTTAGACGGCAAAAGGACGAATGTGCCAACGCCGCCggaactgcagcagcagctgcagcacgaACTGGACCTGGACGAGCAGGATGAATCCGGCGAGGAGGCTGGCGAAGGCGATAGCAATGCGTCGACGCCAGCGCCTGGCTTTCATGAAATCGCCCAGCGCATTGTAGCCACTGATCATCTGTGCAAGCTGAGCAGCATATCCGAGCACAATGGCAGCGAGCTGGGCGATGAGCTGGAATCAGCTATGTCGCCAAAGCCGACGCGTTCACAGAGCGGCGGCACACCAACTGGACACATaccagcggcagctgctgcaacagctgGCGGCAATGCCGCTGGACTGCCCATGCCCATCGATGCGCGTGTCCTGTTGCATACACTAATGCTGGCAGCGGGCATTGGCGCCATGCCCAAGCTGGACGAAACGCAGACGCTGGGTGACGTGTTCAAAACGCTGCTGATGGCCAACAGTGGCGGCATCATGAGCGAGGCGCTCGCCGGCGTTGTGGCGCCCAGCCTCGAGAGCAACGGCAGCGTCTCgttgctgcaacagcagcaacagcagcagcagcagcagctaaatagtgttgctgcagttgccgcCTATCGCCGGCACCTACCAAAGTCTGAAACGCCTGAGACCAGCTCCTCGTTGGATGCCAATGAGGCATGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGTGCGCCCAGCGTCTCGCCCACGCtgcattgcagcagcagcagcagcaacaacaaaaacatcaacCACAActcaaacagcagcagcaaccgcaacggcggcggcgatCACAGTCCACACTCCGCCTCACCAATGCTTGCAGCAGCTGTAGCCGCCGTCGCGgccaacaacagctacaggcagaacagcagcaacagcagcggcaatttGCTGTCGTCGTCGGCAACATCGATACAGAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGAGCAGCCAGGACAGCCTGTTGGGTCTGGACAAGCGCAACAATGGAAACACAAGCGGCAGcgagtgcagcagcagcggcggcggcggcggtggtggtggtggtggtggcggtggcagcggcaacgTCGGCAGAAAGCCCAGCATATCGGTGGCAAAAATCATTGGCGGCACAGATACCTCACGCTTCGGTGCCTCACCTAATCTGCTCGCCCAGCAACATCACAGCCATTTGAGCGCCCATCATGCCCACCAGCATCAGCACCAGCATCAGCAGCTCAGTGCACAGGATGCCGCTGCACTGGCCGCCGGCAAGGGCACGCGACCGAAGCGGGGTAAGTACCGCAACTATGACAGAGACAGCCTCGTGGAGGCAGTCAAGGCCGTTCAGCGCGGCGAGATGTCTGTGCATCGTGCCGGCAGCTATTACGGTGTGCCACACTCAACGCTGGAGTACAAGGTGAAGGAGAGGCATTTGATGCGGCCGCGCAAACGTGAGCCGAAGCCGCAGCCGGATCTCGTGGGACTGACAGGCGCAGCAAATAAAGTGAATTTGACGGCACTGAATCATCTGGATAAGCTGAAGtccggcaacagcagcagcaacgccaACAACAGCTCCGGCTCCAAGCTGAGCAACGCGCTGAAGAACAACAGCAGTGCGGCAGCTGGGACAGCGGCAGCACCCAATGGCATGAAGCTGCCCATTTTTGATGCCGCACCGCAGTTGTCCTTCCAGCCGAGCATGTTCTGGGCACAGCCAAATGCCGGCGCCAACTATGCACTGGACTTCAATCGCAGTCCTGAGTTTCTTAACTCGCACCTGGCCGAGGTGATGCGCAGCAGCCCGCTGGGCGTGGCCGCCAATCATCATGGCCATGGTGGCGTGCACATGACCAGCGCCGTGGACTTTGCCGAGAACATGTACGACGGCATCATACGGAACTCCCTCAAGAAGGATGGCGATGTTATTGCTGGCAGCGGCACTagcggcaatggcaatggcaatgcgcTGCTGGATCAGCTGCTGGTGAAGAAGACGCCACTGCCATTTACCAATAATCGTAGCAATGACTACATCAGCGCCGCCTGTTCCAGTTCCGAGAGCGTCAAACGTCCAGGTAGCCCGCTGAGCGCCTATTCGGATATTAAGCGCGAACGCCTCAGTCCCATGCGCAGCGCCGAAAGTGCCAGCAGTGATGAGGATCATGAGCattccagcaacaacaacaacaacaacaatagcaacaataacaacaacagcgacctggcccacaacaaaaacaagaacggcaacagcaggagcaacaacaagaacaacaacaacgggaaTGGACGCAGCCGCATGACATCGCGCGACTCGGAAACGGACGCCAGCAGCTTGAAGAGCGAGCAATCGCACAGCTCGGCTCAGCTCGCCGGTGCTGGCAACAAAATGATGGATCTCAATGGCAGCACAGGTGTCAAATACGAGCTGGAGCCAACAGCAGCGCAAATCTCACCCAGTAATTCGATATTGCACGAGAAGCTGGCGCAGATCAAAGCCGAACAGGCCGATTGCAACGCACCCGAGGAGCAGTTATAG
Protein Sequence
MGRRKWKHYQDQLTRNQLNIAEQQPISITTEAEDSKHKQSHCEPLNHRLAQPNGQHFNNNNNNNGTLPFESDFDNNHTSQDHDSSATSRSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTAIASSNNNIINNGTAVQQHDSDSNSSASLHNSSRNNNNINNNNHKHRARNAANAATTSSPTTSIELYKLLTQQAAEMTSMDSMAAKLAQFTMMADFNLMNTLANQQHANSVTPTTSELSAAAGSPSLKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSECATPLAAARPTYSNEDLNSVLQDVLANKLGTRKAASQYQAQRTMLRKKQCKMSLDGKRTNVPTPPELQQQLQHELDLDEQDESGEEAGEGDSNASTPAPGFHEIAQRIVATDHLCKLSSISEHNGSELGDELESAMSPKPTRSQSGGTPTGHIPAAAAATAGGNAAGLPMPIDARVLLHTLMLAAGIGAMPKLDETQTLGDVFKTLLMANSGGIMSEALAGVVAPSLESNGSVSLLQQQQQQQQQQLNSVAAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGAPSVSPTLHCSSSSSNNKNINHNSNSSSNRNGGGDHSPHSASPMLAAAVAAVAANNSYRQNSSNSSGNLLSSSATSIQKMMANTIQRKINEQSSQDSLLGLDKRNNGNTSGSECSSSGGGGGGGGGGGGGSGNVGRKPSISVAKIIGGTDTSRFGASPNLLAQQHHSHLSAHHAHQHQHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVNLTALNHLDKLKSGNSSSNANNSSGSKLSNALKNNSSAAAGTAAAPNGMKLPIFDAAPQLSFQPSMFWAQPNAGANYALDFNRSPEFLNSHLAEVMRSSPLGVAANHHGHGGVHMTSAVDFAENMYDGIIRNSLKKDGDVIAGSGTSGNGNGNALLDQLLVKKTPLPFTNNRSNDYISAACSSSESVKRPGSPLSAYSDIKRERLSPMRSAESASSDEDHEHSSNNNNNNNSNNNNNSDLAHNKNKNGNSRSNNKNNNNGNGRSRMTSRDSETDASSLKSEQSHSSAQLAGAGNKMMDLNGSTGVKYELEPTAAQISPSNSILHEKLAQIKAEQADCNAPEEQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00506030;
80% Identity
-