Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_035045725.1
Location
JAWNOU010000093.1:2668693-2679202[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.1e-05 0.12 12.2 0.0 2 31 316 345 315 347 0.90
2 3 6 1.2e+04 -3.8 1.2 5 13 637 645 637 649 0.85
3 3 9.7e-19 1.9e-15 56.4 0.0 1 43 801 844 801 846 0.95

Sequence Information

Coding Sequence
ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAACCAATTGAATATCGCAGAGCAACAGCCCATATCAATAACGACAGAAGCAGAAGACAGCAAACACAAGCAGAGCCACTGCGAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAAcatttcaacaacaacaacagcggatCGCTGCCGTTTGAAAGCGATTTTGACAACAACCACACATCACAAGACCACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTAAACGCCAAAGGCGAATTGGTGGCCGAAACAACGGCAATCGcgtccagcaacaacagcaacaacaacaacatcaacaacggCACAGCTGTGCAGCAGcacgacagcgacagcaattCGAGCGCATCGCTGCACAATAGCAGCagaaatagcaacaacattaacaacaacaacaacaacaacaacaacagcatcaataAGCATAGAGCACGCAACGCCGCTAACGCCGCCACGACGTCGTCGTCAACAACTTCTATAGAACTTTACAAGCTGCTCACCCAGCAAGCAGCTGAAATGACATCAATGGAATCGATGGCCGCCAAGCTGGCACAGTTCAACATGATGGCCGATTTCAATTTGATGAACACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCGGAATTATCAGCCGCCGCTGGCAGTCCCACACTCAAGGATACGCCCAGTCCCAGTGCAGATGCACCATTGGATCTAAGCAGCAAGCCATCGCCAAATTCATCGATCAGCGGCGACATAAAGACAGCCAGAGCTCTGTCAGACTGCGCCACGCCCCTAGCAGCAGCACGCCACACGTACAGCAACGAGGATTTAAATAGCGTGCTGCAGGATGTGCTGGTCAATAAGCTGGGCACACGCAAAGCGGCCAGCCAGTACCAAGTGTCGCGCACCCAGGTGCGCAATAAGCTGTGCAAAATGTCCTTAGATGGCAAAAGGACAAACGTGCCAACGCCGCCAGAGCTGCAACAGCAGATGCAGCACGAACTAGACCTGGACGAGCAGGATGAATCCGGCGAGGAGGCTGGCGAAGGCCACAGCAATGCGTCGACACCAGCGCCTGGCTTTCAGGAAATCGCCCAACGCATTGTAGCCACTGATAATCTGTGCAAGCTGAGCAGCATACCCGAGCACAATGGCAGCGAGCTGGGCGACGAGCTGGAATCCGGAATTATGTCGCCAAAGCAGACGCGTTCTCAGAGCGGCGGCACACCAACTGGACACataccagctgcagctgctgcaacagctggCGGCAATGCCGCTGGACTGCCCATGCCCATCGATGTGCGTGTCCTGTTGCATACCCTTATGCTGGCAGCGGGCATTGGCGCCATGCCCAAGCTGGATGAGACACAGACGCTGGGTGACCTGTTCAAAACGCTGCTGATGGCCAACAGTGGGGGCATCATGAGCGAGCCGCTCGCTGGCGTTGTGGCGCCCAGCCTCGAGAGCAACGGCAGCGTCTcgttgctgcaacaacagcaacagcagcagcagctaaatagtgttgctgcagttgccgcCTATCGTCGCCACCTACCAAAGTCTGAAACGCCTGAGACCAGCTCCTCGTTGGATGCCAATGAGGCATGCGAAGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGTGCGCCCAGCGTCTCGCCCACGCtgcattgcagcagcagcagcaacaacaacaacaacaacaacaactcaaacagcagcagcaaccgcaacggcggcggcgaccACAGTCCACACTCCGCCTCACCAATGCTTGCAGCAGCTGTAGCCGCCGTCGCggccaacaacagctacaggcagagcagcagcaacaacagcggcaattTACTGTCGTCGTCGGCAACATCGATACAGAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGGTCAGCCAAGACAGCCTGTTGGGTCTGGATAAgcgcaacaatggcaacacaAGCGGCAGcgagtgcagcagcagcggtggtggcggcggcggcggtggtggcggtggcagcggcaacgtcGGCAGAAAGCCCAGCATATCAGTGGCAAAAATCATTGGCGGCACAGACACCTCACGCTTCGGTGCCTCACCTAATCTGCTCGCCCAGCAACATCACGGCCATATGAGCGCCCATCATGCCcaccagcatcagcatcagcaccagcatcagcagctCAGTGCACAGGATGCCGCTGCACTGGCCGCCGGCAAGGGCACGCGACCGAAGCGGGGTAAGTACCGCAACTATGACAGAGACAGCCTCGTGGAGGCAGTCAAGGCCGTTCAGCGCGGCGAGATGTCTGTGCATCGTGCCGGCAGCTATTACGGTGTGCCACACTCAACGCTAGAGTACAAGGTTAAGGAGCGGCATTTGATGCGCCCGCGCAAGCGTGAGCCGAAGCCGCAGCCAGATCTCGTGGGACTGACAGGCGCAGCAAATAAGGTGACATTGACGGGACTGAATCATCTGGATAAGTTGAAgtccggcagcagcaacagcagcagcaacgccaaCAACAGTTCCGGCTCCAAGCTGAGCAACGCGCTGAAGAACAACAGCAGtgcggcagctgcggcagcggcagcagcagcgcccaATGGCATGAAGTTGCCCATGTTTGATGCCGCACCGCAGTTGTCCTTCCAGCCGAGCATGTTCTGGGCACAGCCGAATGCCGGCGCCAACTATGGACTGGACTTCAATCGCAATCCTGAATTTCTTAAGACGCACCTGGCCGAGGTGATGCGCAGCAGCCCGCTGGGCGTGGCCGCCAATCATCCTGGCCATGGCGGCGTGCACATGACCAGCGCCGTGGACTTTGCCGAGAACATGTACGACGGCATCATACGGAACTCCCTCAAGAAGGATGGCGATGTTATTGCTGGGAGCGGCACTAGCGGCAATGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCACTGCCATTTACCAATAATCGTAGCAATGACTACATCAACGCCGCCTGTTCCAGTTCCGAGAGCGTCAAGCGTCCGGGTAGCCCGCTAAGCGGCTATTCGGATATTAAGCGCGAACGCTTCAGTCCCATGCGCAGCGCCGAGAGTGCCAGCAGTGATGAGGATCATGAGCattccagcaacaacaacaataacaatagcaacaacaacaacaacaacagtgacCTGGCgcacaacaagaacaacaacggcagcagcaggaacaacaacaagaacaacaacaacgggaaTGGACGCAGCCGCATGACATCGCGCGACTCGGAAACGGACGCCAGCAGCTTGAAGAGCGAGCAATCGAACAGCTCGGCTCAGCTCGCCGGTGCTGGCAACAAAATGATGGATCTCAATGGCAGCACAGGTGTCAAATACGAGCTGGAGCCAACAGCAGCGCAAATCTCAACCAGCAATTCGATATTGCACGAGAAGCTGGCGCAGATCAAGGCCGAACAGGCCGATTGCAACGCACCCGAGGAGCAGTTATAG
Protein Sequence
MGRRKWKHYQDQLTRNQLNIAEQQPISITTEAEDSKHKQSHCEPLNHRLAQPNGQHFNNNNSGSLPFESDFDNNHTSQDHDSSATSRSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTAIASSNNSNNNNINNGTAVQQHDSDSNSSASLHNSSRNSNNINNNNNNNNNSINKHRARNAANAATTSSSTTSIELYKLLTQQAAEMTSMESMAAKLAQFNMMADFNLMNTLANQQHANSVTPTTSELSAAAGSPTLKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPLAAARHTYSNEDLNSVLQDVLVNKLGTRKAASQYQVSRTQVRNKLCKMSLDGKRTNVPTPPELQQQMQHELDLDEQDESGEEAGEGHSNASTPAPGFQEIAQRIVATDNLCKLSSIPEHNGSELGDELESGIMSPKQTRSQSGGTPTGHIPAAAAATAGGNAAGLPMPIDVRVLLHTLMLAAGIGAMPKLDETQTLGDLFKTLLMANSGGIMSEPLAGVVAPSLESNGSVSLLQQQQQQQQLNSVAAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKVSGAPSVSPTLHCSSSSNNNNNNNNSNSSSNRNGGGDHSPHSASPMLAAAVAAVAANNSYRQSSSNNSGNLLSSSATSIQKMMANTIQRKINEQVSQDSLLGLDKRNNGNTSGSECSSSGGGGGGGGGGGSGNVGRKPSISVAKIIGGTDTSRFGASPNLLAQQHHGHMSAHHAHQHQHQHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVTLTGLNHLDKLKSGSSNSSSNANNSSGSKLSNALKNNSSAAAAAAAAAAPNGMKLPMFDAAPQLSFQPSMFWAQPNAGANYGLDFNRNPEFLKTHLAEVMRSSPLGVAANHPGHGGVHMTSAVDFAENMYDGIIRNSLKKDGDVIAGSGTSGNGNALLDQLLVKKTPLPFTNNRSNDYINAACSSSESVKRPGSPLSGYSDIKRERFSPMRSAESASSDEDHEHSSNNNNNNSNNNNNNSDLAHNKNNNGSSRNNNKNNNNGNGRSRMTSRDSETDASSLKSEQSNSSAQLAGAGNKMMDLNGSTGVKYELEPTAAQISTSNSILHEKLAQIKAEQADCNAPEEQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00490702;
80% Identity
-