Dnik023891.1
Basic Information
- Insect
- Drosophila nikananu
- Gene Symbol
- kn
- Assembly
- GCA_008042635.1
- Location
- VNJV01001007.1:12661-16432[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-139 1e-134 450.4 0.0 183 384 14 244 11 248 0.99 2 2 1e-07 0.0012 17.6 15.4 422 519 249 346 244 366 0.63
Sequence Information
- Coding Sequence
- ATGGGAATTGGAGAACTGCAGGAGAAAGGGCGTTTAAGCTTCTTCCTCAAGTTCTTCTTGAAGTGCAATCAAAACTGTTTAAAGAATGCCGGCAACCCGCGGGATATGCGCAGATTTCAGGTGGTGATCTCCACACAGGTGGCCGTTGATGGACCACTGCTGGCCATCTCCGACAACATGTTCGTGCACAACAATTCGAAGCACGGGCGGCGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCCCCACTGCCCGTGGCCACGCCCTGCATCAAGGCGATCTCACCCAGCGAGGGCTGGACAACTGGAGGCGCCACCGTTATCATTGTGGGAGATAACTTCTTCGATGGCCTCCAAGTGGTCTTTGGCACTATGCTGGTCTGGAGCGAGCTGATCACCTCGCACGCGATTCGGGTGCAGACGCCACCGCGCCACATTCCCGGGGTGGTAGAGGTGACGCTATCCTACAAGAGCAAGCAATTCTGCAAGGGGTCGCCCGGTCGCTTCGTCTATGTCTCAGCTCTCAATGAACCCACAATTGACTACGGTTTCCAGCGCCTGCAGAAGCTCATACCCCGACATCCTGGGGATCCCGAGAAGCTGCAGAAGGAGATAATCCTCAAGCGAGCAGCCGACCTGGTCGAGGCACTGTATTCCATGCCCAGCAGATCCCCGGGCGGCTCTACAGGCTTCAACTCCTACGCCGGCCAGCTGGCGGTCAGTGTGCAGGATGGCACTGGCCAATGGACCGAGGACGATTACCAGCGGGCCCAGTCGAGCAGCGTGAGTCCGCGTGGTGGTTACTGCAGCAGTGCCTCCACGCCGCATAGCTCGGGAGGATCCTACGGTGCAACGGCCGCTAGTGCGGCGGTGGCAGCCACTGCCAATGGCTATGCGCCTGCACCCAACATGGGCACCTTGTCCTCCTCGCCCGGCAGCGTTTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCACCATGCAGCGGCCGCCCATCCGCACCATCACTACCCGCATCCCCACCAGCCCTGGCACAATCCGGCAGTGTCAGCAGCTACGGCGGCGGCCGTTTAA
- Protein Sequence
- MGIGELQEKGRLSFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAAAAHPHHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615327;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00492010; iTF_00488501; iTF_00612601; iTF_00489822; iTF_00489869;