Dbir005742.1
Basic Information
- Insect
- Drosophila birchii
- Gene Symbol
- kn
- Assembly
- GCA_008042755.1
- Location
- VNKA01005790.1:66695-71357[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-139 8.2e-135 450.4 0.0 183 384 14 244 11 248 0.99 2 2 9.5e-08 0.0009 17.7 15.4 422 519 249 346 244 366 0.63
Sequence Information
- Coding Sequence
- atggaaagctGGATGGGGGCAAAGGAGCAGAGCCTGAGCTTCTTTCTCAAGTTCTTTTTGAAGTGCAATCAAAATTGTCTGAAGAATGCCGGCAACCCGCGGGATATGCGCCGATTTCAGGTGGTGATCTCCACACAGGTGGCCGTTGATGGACCACTGCTGGCCATCTCCGACAATATGTTCGTGCACAACAATTCGAAGCACGGACGGAGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCACCGCTGCCCGTGGCCACGCCCTGCATCAAGGCGATCTCACCCAGCGAGGGCTGGACAACTGGCGGCGCCACCGTCATCATTGTCGGCGATAACTTCTTCGATGGCCTCCAAGTGGTCTTTGGCACCATGCTGGTCTGGAGCGAGCTGATCACCTCGCATGCGATTCGGGTGCAAACACCGCCGCGGCACATACCCGGCGTGGTCGAGGTGACGCTATCCTACAAGAGCAAGCAATTCTGCAAGGGATCGCCCGGTCGCTTCGTCTATGTCTCAGCTCTCAATGAACCCACTATCGACTATGGTTTCCAGCGCCTGCAGAAGCTTATACCTCGGCATCCTGGTGATCCCGAGAAGCTGCAGAAAGAGATAATCCTCAAGCGAGCAGCCGATCTGGTCGAGGCTCTATATTCCATGCCCAGCAGATCCCCGGGCGGCTCTACAGGCTTCAACTCCTATGCCGGCCAGCTGGCGGTCAGTGTGCAGGATGGCACTGGCCAGTGGACCGAGGACGACTACCAGCGGGCCCAGTCGAGCAGCGTGAGTCCGCGTGGTGGTTACTGCAGCAGTGCCTCCACGCCGCATAGTTCGGGAGGATCCTATGGAGCCACGGCAGCCAGTGCAGCGGTGGCGGCCACAGCCAATGGTTATGCGCCTGCACCCAACATGGGCACATTGTCCTCCTCGCCCGGCAGCGTTTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCACCATGCGGCGGCCGCCCATCCGCACCATCACTACCCGCATCCCCACCAGCCCTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTaa
- Protein Sequence
- MESWMGAKEQSLSFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAAAAHPHHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615327;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00561535;