Basic Information

Gene Symbol
kn
Assembly
GCA_008042515.1
Location
VNJQ01000165.1:74949-78286[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1e-139 6.6e-135 450.7 0.0 181 384 46 278 40 282 0.98
2 2 1e-07 0.00096 17.6 15.2 422 519 283 380 278 399 0.63

Sequence Information

Coding Sequence
ATGGAGCATCCCAAAGTGATGACATCCCCTCGTATATCCTCGTGTTTCCCGGGGATGAAGTCATCGCCACCGAGCAAGTGGAATGATCCTCTCAATAGCCACTCGATACGTATTCAAATTTCAGAGCTGCAGTTGCATCTCTTCTTCCTCAAGTTCTTCTTGAAGTGCAATCAAAATTGTCTGAAGAATGCCGGCAACCCGCGGGATATGCGCCGATTTCAGGTGGTGATCTCCACACAGGTGGCCGTTGATGGACCTCTGCTGGCCATCTCCGACAATATGTTCGTGCACAACAATTCGAAGCACGGACGGAGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTTTATCCCCCGCTGCCCGTGGCCACGCCCTGCATCAAGGCGATCTCACCCAGCGAAGGCTGGACAACTGGCGGTGCCACCGTTATCATTGTGGGCGATAACTTCTTCGATGGCCTCCAAGTGGTCTTTGGCACCATGCTGGTCTGGAGTGAGCTGATCACCTCGCATGCTATACGGGTGCAGACACCACCGCGGCACATACCCGGCGTGGTCGAGGTGACGCTATCCTACAAGAGCAAGCAATTCTGCAAGGGATCGCCTGGTCGCTTCGTCTATGTCTCAGCTCTCAACGAACCCACAATTGACTACGGTTTCCAACGCCTGCAGAAGCTGATACCCCGTCATCCAGGCGATCCTGAGAAGCTGCAGAAAGAGATAATCCTCAAGCGAGCAGCGGACCTGGTCGAGGCTCTATATTCCATGCCCAGCAGATCCCCGGGCGGCTCCACAGGCTTCAACTCCTATGCCGGCCAGTTGGCAGTCAGTGTGCAGGATGGCACTGGCCAGTGGACCGAGGACGATTACCAGCGGGCCCAGTCGAGCAGCGTGAGTCCGCGAGGTGGTTACTGTAGCAGCGCCTCCACGCCACATAGTTCGGGAGGATCCTATGGCGCCACGGCAGCTAGCGCAGCGGTGGCGGCCACTGCCAATGGTTATGCACCTGCACCCAACATGGGCACGTTGTCCTCCTCGCCTGGCAGTGTTTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCACCATGCGGCAGCCGCCCATCCGCACCATCACTACCCGCATCCCCACCAGCCCTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
Protein Sequence
MEHPKVMTSPRISSCFPGMKSSPPSKWNDPLNSHSIRIQISELQLHLFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAAAAHPHHHYPHPHQPWHNPAVSAATAAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00540831;
90% Identity
iTF_00484185;
80% Identity
iTF_00561535;