Basic Information

Insect: Drosophila neotestacea
Gene Symbol: bab1
Assembly: GCA_035044365.1
Location: JAWNMD010000157.1:11705965-11708941[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-17 2.2e-14 53.1 0.0 1 43 55 98 55 100 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-17	2.2e-14	53.1	0.0	1	43	55	98	55	100	0.95

Sequence Information

Coding Sequence: ATGATGGAAAACTCTCACGCTTGGATGGGCGCCACGGGCTCCACGTTAGCAGCAGACAGCTATCAGTATCAACTGCAGTCCATGTGGCAAAAATGCTGGAACACCAATCAAAATCTGATGCATCACATGCGATTTCGCGAACGTGGTCCACTCAAATCCTGGCGACCAGAAACAATGGCCGAGGCCATTTTCAGTGTGCTCAAAGAGGGACTTTCACTATCGCAAGCAGCTCGCAAATATGACATACCCTATCCGACGTTCGTGCTCTATGCGAATCGAGTGCACAACATGCTGGGACCCTCCATCGATGGTGGCCCCGATTTGCGGCCCAAGGGACGTGGAAGGCCGCAGCGAATTCTGTTGGGCATCTGGCCGGATGAGCACATCAAGGGCGTCATCAAGACGGTGGTTTTTCGCGATACCAAGGACATGAAAGACGACAGCTTAGGCGCGCACATGCCACCATACGGCCGACATTCGCCCGTGTTTTCTTTGCAGGACATGACCCTTAGCTATCCAGGCGCTAGTGGCGGCATGCCGGGCAGCGGCGCAGCCGGCCTAAGCGCCTTGGCCTGTCCAAATGGCATGGGCAGTGGAGGAGGAGGCAGCTCTGTAGGTGTCGATCAGCAAATGTCCCAGGAACAAATGTCGGCAGTTGCTGCCGTGGCGCACAATATACGCCAGCAGATGCAAATGGCCGCCGCAGCGCAGCATCAGCACGGGGAAGCGGGACCGCCGCCTGGGCTATTCAATTTACCACCGCATCTAGCAGGTGGACCGGGACGGGCCAGTATATCACCGGCATTGAGCAGCGGCTCGAATCCGTCGTTAGGTCCACGGCATGCGCCCTCGCCCTGCGGTCCCGCCGGCCTGATGCCGAATCTGCCGCCCAGCATGGCCGTTGCACTGCATCGTGATCCAGCCGCTGCCGCCCTGCTtagccagcagcagcagcatcacctccaacagttgcagctgcatcaacaccagcaacagcagcagcaacaacaacaacaacagcagcagcaacacgcTCTACACCAACAACAGGCACAGGCAgcagcggctgctgctgcagctgtaCATCCGCATCATATGCAACCTCACAAGTCCGGTTTCGGTGCCAGTTCCATGCCCTCAGCCAGCGTTGGCTCCTCTGCcgtccagcagcagcagcagcagcaacaacaacaacagcagcagcagcagcaacactcaCAGCTTGGTTTGGGCCTTGTGgacaagtccaagtccaagagCAGTCCGCTGCGCAGTGAAACGCCACGTTTACACTCCCCGCTGGCCGAACTGGGTCTAGAGATGACCTACAAGCGAGAATATTCACCAACCCGTCTCTTTGCCGATGATCTGGCCGAGCTTGTGGGTGCAAGTAGCGTGGTGGGTATTccttcctcatcctcatcctcgaCAAGTGTAACCACCGCGACGACGACAGTGACACATAGTGGGGCAGCAGGTGTGGCAAGTGGTGCAGACATATGTTccagcagtggcagcaacattaaAGTGGAACCTATTACCACAAGCAGCGAATAG
Protein Sequence: MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDMKDDSLGAHMPPYGRHSPVFSLQDMTLSYPGASGGMPGSGAAGLSALACPNGMGSGGGGSSVGVDQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPPGLFNLPPHLAGGPGRASISPALSSGSNPSLGPRHAPSPCGPAGLMPNLPPSMAVALHRDPAAAALLSQQQQHHLQQLQLHQHQQQQQQQQQQQQQQHALHQQQAQAAAAAAAAVHPHHMQPHKSGFGASSMPSASVGSSAVQQQQQQQQQQQQQQQQHSQLGLGLVDKSKSKSSPLRSETPRLHSPLAELGLEMTYKREYSPTRLFADDLAELVGASSVVGIPSSSSSSTSVTTATTTVTHSGAAGVASGADICSSSGSNIKVEPITTSSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00490706; iTF_00526503; iTF_00530879; iTF_00506785; iTF_00509026; iTF_00614113; iTF_00520555; iTF_00560962; iTF_00585891; iTF_00805891; iTF_00595172; iTF_00589476; iTF_00567461; iTF_00568901; iTF_01327814; iTF_01321117; iTF_00495784; iTF_01320392; iTF_00470793; iTF_00582186; iTF_00519085; iTF_00608366; iTF_00802767; iTF_01570167; iTF_00832078; iTF_00610575; iTF_00901423; iTF_01326319; iTF_01327088; iTF_00575505; iTF_01556049; iTF_00506034; iTF_00583603; iTF_01325589; iTF_00528726; iTF_00537434; iTF_00585114; iTF_01356058; iTF_00562395; iTF_00598076; iTF_00533727; iTF_00601701;
90% Identity: iTF_00608366; iTF_00583603; iTF_00537434;
80% Identity: -