Basic Information

Insect: Drosophila neotestacea
Gene Symbol: ttk
Assembly: GCA_035044365.1
Location: JAWNMD010000157.1:3388843-3392854[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.4e-19 1.1e-15 57.2 0.0 2 45 599 643 598 643 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.4e-19	1.1e-15	57.2	0.0	2	45	599	643	598	643	0.97

Sequence Information

Coding Sequence: ATGTCTGTGCAGCAATTCTGTCTGCGCTGGAACAATCACCAGCCAAACTTTATATCCGTCTGCTCTTCGCTGTTGCACAATGGGACGCTAGTGGACGTCACGCTTGCCGCGGAGGGCCGTCAACTGCAGGCCCACAAAATTGTGCTCTCCGCGTGCAGCTCGTACTTTCAGGCGCTGTTTACGACAAATCCGTGCCAGCATCCGATTGTCATACTGAAGGACGTGCAGTACGATGATCTCAAAACGATGGTGGATTTTATGTACTACGGCGAGGTGAATGTGTCCCAGGAGCAGCTGCCGCACATACTAAAAACGGCCGAAATGCTCAAGATCAAGGGTCTCGCCGAGATGCCCACAGATCCGGCCAACCTCACCAAGTCCGACAGCAAGTCATCCAGTGAGGCTACCGAGTTGCTTGGCCAAGCTGGTGCCAATGTGGCCGGGACTAGCACTAGCGCTGCTGCCTCCAGTTTGGGAGCAGCCAGTGCCAGTAGCAGTGCCGGAGATTCGCTTTGGAGTAGCAGCGAGGCTCAGCAATTccagcagcatcatcagcaacagctgcagcaacaactgcagcagcaacaggcccaacaacagcagcagcaacaggcccaacaacagcagcagcaacaacagcagcagcaacaacaacagcagcagcaacagcatcatcaccaccatcatcatcaccaaccacagcagcaacaacagcaagctAGCCAAGCTCAGAGCTCCCAGgcgcatcatcatcagctaAGACGCACGCCATCGCCACTGAGTGCTGGCACATCGCCGGCAACGCGACGCAAGCGTTTGCGTAAATCCTCGAATAACGgCTCTGGGGAACGCAATAACTCTGAGGATCAGCATAGCAGCTCTCTGGATACAGCTGGCGCTGCTGGAAGTGCTTCAGGTCTAAGCTTAGCCCAAATGAGCCAAATGTCGTTTGGCGCAGGAGCGGGTGGCAACTCGGCCGCAGCGTTGGGTAGCCTCTCAGGACATTCGCTGCATGCCACCAAGCTGATAAAGGAGTCAACGAGCGCTGATTTAGAGCAGCAACCTCAAGATTCAGATCTGGATGACGCACAcggacacatacatatgcaaattAAGCCCGAGGTGGACATCGGCAGTGTGAATCAATCGATGCCTCTGGACATTTCTGGCACCACAACACCATCGGAACACGACGCCCCCAATTCACAATCGTCGCACTCTGGTCTGCAATGGACAGTTGTTGATTCAAACTATTCGCGCTTCTCGATGCCCGCCTGTCAGTCCAACTTGATTGGGAACGGCAACGGTGGCAATCAAAACAGTGGGGCGAATAACAGTACCGGCGTCGGCACTGCCGGCACCAACGatcaacggcaacagcagcagcagcaacatgatGCCCAGCAGCAAgcaacgcagcagcagcaacagcagcacttgcaacagctgcattatcaacagcagcagcaacaacaacagggcGCCGCAGCCGGTCAAGCGTACTCATCGCAAATTATTACCGTCAATAATCTGGTCAGCGGttatgcaacagcagcacagAACTTGTCACCAACGTCACCCAACGAGTCAAACATGGTGCAGTCCGTCTATAGTCAGGGTCCGACACCCACGCAATCGCCTGTGCATTCgggtgttggtggtggtggcggtggcagcAGTGCGGCCGGAAGTGCGGGCAGTGctggtggcggtggcggtggcaatAGCAGCAGTGGTGGTGGAGGCGGTGGTGGTCAAGTGCCTAAACGGAAGCGATCAGTTAACCCGCAAGGTGATGAGAATTTCATACGAGCCTTGGAGGCAGTACGTACAGGCGGCATTGGATTCTGCAAAGCTGCTCGCCTATATGGAGTCAACAATCGTACACTTTGGCTGGAGTATAAGAAGCGAGGTTATCCAGTCTCGAGGCCCAGCATTAAGGCGCGTGTGGTGAAGCAGGAACCAAATCTTTCACCATCACCAACACCATCCACAAATCCCGGCGATGACACGACCAACGAAACTTATGACCATCTAACCGCTGCCGTTGCCGCGGCCCAAACCGCTGCCCTCAACATGCAGATACCTCCACAGACCGAGACACCGACGCCATCGCTGATGTGTACGCCTCATCATGCAGGCGCAACAGCGGCCAGTACAGCCGGTGGCACGAATACCCATCCGATCGGTGTTATGAGCCTGTTTGACACACGGTATATGGATTCACCGACAATGTCCCGGCAGCGGTATATTGATGCGACGGGCGCCGGCACAGCAGCGTCAGCCACGGGAACGGGAACAATTAACGTGAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTCAACTCAATATAG
Protein Sequence: MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSEATELLGQAGANVAGTSTSAAASSLGAASASSSAGDSLWSSSEAQQFQQHHQQQLQQQLQQQQAQQQQQQQAQQQQQQQQQQQQQQQQQQHHHHHHHHQPQQQQQQASQAQSSQAHHHQLRRTPSPLSAGTSPATRRKRLRKSSNNGSGERNNSEDQHSSSLDTAGAAGSASGLSLAQMSQMSFGAGAGGNSAAALGSLSGHSLHATKLIKESTSADLEQQPQDSDLDDAHGHIHMQIKPEVDIGSVNQSMPLDISGTTTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSMPACQSNLIGNGNGGNQNSGANNSTGVGTAGTNDQRQQQQQQHDAQQQATQQQQQQHLQQLHYQQQQQQQQGAAAGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGGSSAAGSAGSAGGGGGGNSSSGGGGGGGQVPKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAVAAAQTAALNMQIPPQTETPTPSLMCTPHHAGATAASTAGGTNTHPIGVMSLFDTRYMDSPTMSRQRYIDATGAGTAASATGTGTINVNPAAAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00568898; iTF_00470790; iTF_00519082; iTF_00519236; iTF_00610572; iTF_00610725; iTF_00589614; iTF_00589473; iTF_00575663; iTF_00575501; iTF_00528723; iTF_00528882; iTF_00595318; iTF_00595169; iTF_00537431; iTF_00585111; iTF_00601879; iTF_00601698; iTF_00562392; iTF_00562542; iTF_00472285; iTF_00472428; iTF_00510621; iTF_00510460; iTF_00533725; iTF_00533879; iTF_00335998; iTF_00335800; iTF_00506782; iTF_00506949; iTF_00614110; iTF_00614260; iTF_00509023; iTF_00520704; iTF_00520552; iTF_00553664; iTF_00553786; iTF_00585888; iTF_00586038;
90% Identity: iTF_00575663;
80% Identity: -