Dlim020959.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- ttk
- Assembly
- GCA_963924055.1
- Location
- OZ001354.1:19142188-19146053[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-19 1.5e-15 57.2 0.0 2 45 593 637 592 637 0.97
Sequence Information
- Coding Sequence
- ATGTCTGTGCAGCAATTCTGTCTGCGCTGGAACAATCACCAGCCAAATTTCATATCCGTCTGCTCCTCACTGTTGCACAATGGGACGTTGGTGGACGTCACGCTTGCCGCGGAGGGCCGTCAACTGCAGGCCCACAAAATCGTGCTCTCCGCGTGCAGCTCGTACTTTCAGgCGCTGTTTACGACAAATCCATGCCAGCATCCGATTGTTATACTGAAGGACGTGCAGTACGATGATCTCAAAACGATGGTGGACTTTATGTACTACGGCGAGGTGAATGTGTCTCAGGAGCAGCTGCCGCACATACTTAAAACGGCTGAGATGCTCAAGATCAAGGGTCTCGCCGAAATGCCCACAGATCCGGCCAACCTCACCAAGTCCGACAGCAAGTCATCCAGCGAAGCAACCGAGCTGCTCGGCCAAGCTGGCGCCAATGTGGCGGGCACTAACACTAGCGCTGCTGCCTCCAGTCTGGGAGCAGCCAGTGCCAGTAGTAGTGCCGGCGATTCGCTTTGGAGTAGCAGTGAGGCACAGCAATTCCAGCAGCATcaccagcaacagctacagcaacaactgcagcaacagcaggcacaacaacagcagcaacaacaacagcagcagcaacaacagcagcaacaacaacagcagcagcaacagcatcatcatcaccatcatcatcatcaagctcagcagcaacaacagcaaggcAGCCAGGCTCAGAGCTCGCAGACGCATCATCATCAACTGAGACGCTCGCCATCGCCCCTGAGTGCTGGCACCTCGCCGGCCACGCGACGCAAGCGTTTGCGTAAATCCTCGAATAACGGCTCTGGGGAACGCAATAACTCTGAGGATCAGCATAACAGCTCTCTGGATGCAGCTGGTGCTGCTGGCAGTGCTGCCGGACTTAGCTTGGCACAGATGAGCCAAATGTCCTTTGGCGCAGGAGCGGGTGGCAACTCGGCCGCTGCGTTGGGTAGCCTCTCTGGACATTCGATGCATGCCAGCAAGCTGATAAAGGAGTCAACGAGCACGGAACTGGAGCAACAGCCACAGGATTCGGATCTGGATGACGCACACggacacatacatatgcaaattAAGCCCGAGGTGGACATCGGCAGTGTGAATCAATCGATGCCCCTGGACATTTCTGGCACGACAACTCCATCGGAACACGACGCTCCCAATTCACAATCGTCGCACTCTGGTCTGCAATGGACAGTTGTCGATTCAAACTATTCGCGATTCTCGATGCCCGCCTGCCAGTCCAACTTGATTGGGAACGGTGGCAATGGTGGCAATCAAAACAGCGGCGCGAATAACACTGCCGGCGTCGGCACCGCCGGCACCAACGatcaacggcaacagcagcagcaacaacacgatGCCCAGCAGCAAgcaacgcagcagcagcagcacttgCAACAGCTGCActatcagcaacagcagcagcaacaacaacagggcGCCACAGCCGGTCAAGCGTATTCCTCCCAAATTATAACCGTCAATAATCTTGTGGGCGGttatgcaacagcagcacagaaCTTGTCACCCACGTCGCCCAACGAGTCGAACATGGTGCAGTCCGTTTACAGTCAGGGTCCGACGCCCACACAATCGCCAGTGCACTCGGGTGTAGGTGGAGGCGGTGGCGGAGGAGGCAGTAGTGCGGCAGGAAGTGCGGGCAGTGCTGCTGTCGGTGGTGGTGGCAATAGCAGCAGCGGTGGTAGTCAAGTGCCTAAACGGAAGCGATCAGTCAACCCGCAAGGTGATGAGAATTTCATACGTGCCCTGGAGGCGGTCCGTACCGGCGGCATTGGATTCTGCAAGGCTGCTCGTCTGTATGGAGTGAACAATCGCACACTTTGGCTGGAGTATAAGAAGCGGGGCTACCCGGTATCGCGGCCCAGCATTAAAGCACGTGTGGTCAAGCAGGAACCAAATCTTTCGCCGTCACCGACACCATCCACAAATCCCGGCGATGATACAACCAACGAAACATATGATCATCTAACCGCTGCCGTTGCCGCGGCCCAAACCGCCGCCCTCAACATGCAGATACCCCCACAGACGGAGACACCGACGCCGTCGCTGATGTGTACGCCTCACCACTCAGGCGGAACAGCGGCAAGCTCAGCCGGTGGTGGCACCAATACGCACCCGATAGGTGTGATGAGCCTGTTTGACACACGCTATATGGATTCACCGACAATGTCCCGGCAGCGGTATATCGATGCGACGGGCGCCGgcacagcagctgctgcttcggGAACGGGAACGATCAATGTGAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTCAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSEATELLGQAGANVAGTNTSAAASSLGAASASSSAGDSLWSSSEAQQFQQHHQQQLQQQLQQQQAQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHQAQQQQQQGSQAQSSQTHHHQLRRSPSPLSAGTSPATRRKRLRKSSNNGSGERNNSEDQHNSSLDAAGAAGSAAGLSLAQMSQMSFGAGAGGNSAAALGSLSGHSMHASKLIKESTSTELEQQPQDSDLDDAHGHIHMQIKPEVDIGSVNQSMPLDISGTTTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSMPACQSNLIGNGGNGGNQNSGANNTAGVGTAGTNDQRQQQQQQHDAQQQATQQQQHLQQLHYQQQQQQQQQGATAGQAYSSQIITVNNLVGGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGGGGSSAAGSAGSAAVGGGGNSSSGGSQVPKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAVAAAQTAALNMQIPPQTETPTPSLMCTPHHSGGTAASSAGGGTNTHPIGVMSLFDTRYMDSPTMSRQRYIDATGAGTAAAASGTGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00557831;
- 90% Identity
- iTF_00575663;
- 80% Identity
- iTF_00533879;