Dfun000262.1
Basic Information
- Insect
- Drosophila funebris
- Gene Symbol
- ttk
- Assembly
- GCA_018901825.1
- Location
- JAEIFK010000692.1:2089718-2093606[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-19 8.9e-16 57.2 0.0 2 45 597 641 596 641 0.97
Sequence Information
- Coding Sequence
- ATGTCGGTGCAGCAGTTCTGTCTGCGCTGGAACAATCACCAGCCAAACTTCATATCCGTCTGCTCTTCGCTGTTGCACAATGGGACGTTGGTGGACGTCACGCTTGCCGCGGAGGGCCGACAACTACAGGCACACAAAATTGTGCTCTCCGCATGCAGCTCATATTTTCAGGCCCTGTTTACGACAAATCCGTGCCAGCATCCGATTGTCATACTGAAGGACGTGCAGTACGATGATCTCAAGACGATGGTGGACTTTATGTACTACGGCGAGGTGAATGTTTCACAGGAACAGTTGCCGCACATACTTAAAACGGCCGAGATGCTCAAGATCAAGGGTCTCGCCGAGATGCCCACCGATCCGGCCAACCTCACCAAGTCCGACAGCAAGTCATCCAGCGAAGGTACTGAGTTGCTCGGCCAAGCTGGCGCCAATGTGGCGGGAACTAGCACTAGCGCTGCTGCATCCAGTTTGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAAACGCATCATCATCAGTTGAGACGCACGCCATCGCCTCTGAGTGCTGGCACCTCGCCGGCCACGCGACGCAAGCGTTTGCGTAAATCCTCGAATAACGGCTCTGGCGAACGTAATAACTCTGAGGATCCGCATAGCAGCTCACTGGATGCAGCTGGTGCCGCTGGTGGTGCTGCCGGGCTCAGCTTGGCCCAGATGAGCCAAATGTCGTTTGGTGCTGGAGCTGGTGGCAACTCGGCTGCAGCGCTGGGCAGCCTCTCGGGACATTCGATGCATACCACCAAGCTGATAAAAGAGTCAACGAGCACTGATCTAGAGCAGCAGCCACAGGATTCGGATCTGGATGACGCACACGGACACATACATATGCAAATTAAGCCTGAAGTGGACATCGGCAGTGTGAATCAATCGATGCCTCTGGACATTTCTGGCACTACAACACCATCGGAACACGACGCCCCCAATTCACAATCTTCGCACTCTGGTCTGCAATGGACAGTTGTTGATACAAACTATTCGCGCTTCTCGATGCCCGCCTGCCAGTCCAACTTGATTGGGAACGGCAACGGTGGCAATCAAAACAGTGGTGCAAATAACAGTGCCGGCGTCGGCACCGCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGGCCAAGCGTACTCATCGCAAATTATAACCGTGAATAATCTTGTCAGTGGTTATGCAACGACAGCACAGAACTTGTCACCAACATCACCCAACGAGTCTAACATGGTGCAGTCTGTTTACAGTCAGGGTCCTACACCCACACAGTCGCCTGTGCACTCGGGTGTGGGTGGTGGAGGCGGCGGCAGCAGTGCGGGTGGAAGTGCGGGGAGTGCTGGTGGCGGCGGTGGTAATAGCAACAGTGGCGGTGGCGGTGGTAGTCAAGTGCCTAAACGGAAGCGATCTGTTAATCCGCAAGGTGATGAGAACTTCATACGGGCCTTGGAGGCTGTTCGTACCGGCGGCATTGGATTCTGCAAGGCTGCTCGCCTGTATGGAGTTAACAATCGCACACTCTGGCTGGAGTATAAGAAGCGGGGTTATCCGGTCTCGAGGCCCAGCATTAAAGCACGTGTGGTCAAGCAGGAGCCAAATCTTTCACCATCGCCGACACCATCCACAAATCCCGGCGATGAAACGGCCAACGAAACATATGATCATCTAACCGCTGCCGTTGCCGCGGCCCAAACCGCAGCCCTCAACATGCAGATACCTCCCCAGACCGATACGCCGACGCCTTCATTAATGTGTACGCCTCACCACGCCGGGGGAACAGCGGCCAGCTCAGCTGGTGGCACAAATACGCATCCGATCGGTGTGATGAGCCTGTTTGACACACGCTATATGGATTCGCCGACAATGTCCCGGCAGCGGTATATCGATGCGACGGGCGCTGGCACCGCAGCCGCTGCCACAGGACCGGGAACGATCAATGTGAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTCAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSEGTELLGQAGANVAGTSTSAAASSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQTHHHQLRRTPSPLSAGTSPATRRKRLRKSSNNGSGERNNSEDPHSSSLDAAGAAGGAAGLSLAQMSQMSFGAGAGGNSAAALGSLSGHSMHTTKLIKESTSTDLEQQPQDSDLDDAHGHIHMQIKPEVDIGSVNQSMPLDISGTTTPSEHDAPNSQSSHSGLQWTVVDTNYSRFSMPACQSNLIGNGNGGNQNSGANNSAGVGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGQAYSSQIITVNNLVSGYATTAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGGSSAGGSAGSAGGGGGNSNSGGGGGSQVPKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDETANETYDHLTAAVAAAQTAALNMQIPPQTDTPTPSLMCTPHHAGGTAASSAGGTNTHPIGVMSLFDTRYMDSPTMSRQRYIDATGAGTAAAATGPGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00557831;
- 90% Identity
- iTF_00510621;
- 80% Identity
- iTF_00510621;