Basic Information

Insect: Drosophila navojoa
Gene Symbol: -
Assembly: GCA_001654015.2
Location: NW:23811-29912[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00018 0.011 15.7 0.7 1 23 147 169 147 169 0.98

2 14 0.00012 0.0067 16.3 1.7 1 23 393 415 393 415 0.98

3 14 1.3 77 3.5 0.8 1 23 421 444 421 444 0.94

4 14 0.7 40 4.4 0.2 1 23 471 494 471 494 0.92

5 14 0.00099 0.057 13.4 1.9 3 23 766 786 765 786 0.92

6 14 0.04 2.3 8.3 1.4 1 23 792 815 792 815 0.98

7 14 5.9 3.4e+02 1.5 1.1 3 23 853 873 851 874 0.85

8 14 0.01 0.59 10.2 0.5 1 23 895 918 895 918 0.97

9 14 0.032 1.8 8.7 1.1 1 23 1147 1170 1147 1170 0.91

10 14 0.00025 0.014 15.3 4.2 1 23 1183 1205 1183 1205 0.98

11 14 0.0002 0.012 15.6 0.1 2 23 1211 1233 1210 1233 0.93

12 14 0.0011 0.06 13.3 4.2 2 23 1242 1266 1241 1266 0.89

13 14 0.038 2.2 8.4 0.6 1 23 1271 1293 1271 1293 0.97

14 14 0.0053 0.3 11.1 1.3 1 23 1299 1322 1299 1322 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00018	0.011	15.7	0.7	1	23	147	169	147	169	0.98
2	14	0.00012	0.0067	16.3	1.7	1	23	393	415	393	415	0.98
3	14	1.3	77	3.5	0.8	1	23	421	444	421	444	0.94
4	14	0.7	40	4.4	0.2	1	23	471	494	471	494	0.92
5	14	0.00099	0.057	13.4	1.9	3	23	766	786	765	786	0.92
6	14	0.04	2.3	8.3	1.4	1	23	792	815	792	815	0.98
7	14	5.9	3.4e+02	1.5	1.1	3	23	853	873	851	874	0.85
8	14	0.01	0.59	10.2	0.5	1	23	895	918	895	918	0.97
9	14	0.032	1.8	8.7	1.1	1	23	1147	1170	1147	1170	0.91
10	14	0.00025	0.014	15.3	4.2	1	23	1183	1205	1183	1205	0.98
11	14	0.0002	0.012	15.6	0.1	2	23	1211	1233	1210	1233	0.93
12	14	0.0011	0.06	13.3	4.2	2	23	1242	1266	1241	1266	0.89
13	14	0.038	2.2	8.4	0.6	1	23	1271	1293	1271	1293	0.97
14	14	0.0053	0.3	11.1	1.3	1	23	1299	1322	1299	1322	0.96

Sequence Information

Coding Sequence: ATGGCGAGCAAGCGAGTAAAAACAGAGGGCATGGAAACCAATTACAAATTTTCGTGTCGCTGTTGCCTCAAATCCGAGGCGGAATTCTACAAACTGGACTCGCTAATAGAGTGCGGCAGTGGCGAAAATGACGCGTCCTCTACAAAAATACCCCTACTGCGTTTACTATTATTCTGCATGCGCATTGAAAATCAGCCCGAGCTGCCGCAATACATATGCGTGGAGTGTAGTAAAAGTTTGCAAATCTCCTACTATTTTATACAGAATGGACTGAGAGCACACGAAATACTCTGTCGAAAACTGTGCCCTGGCAAGCTAAAGCTAAATTCACCGCGTTCCAACGGTCAACAGCCAATACATAGGCTCGAGtCGAACGAGAGCGAGGATGCGACGCAGCCCAGACTCTGGGATCGAAAGTCACAAAAGTCCATCACGCGTCACGAATGTAAAGTATGCGGTGCCATGGTATACAATCGCATGGAGCTCAAGCAACACATACGCATGCACGCAGATGCATCGAGTCATCAGTGCAAATTGTGCAGCTTTGTCACGTACAAGCACCGCCAGCTGCCGGAGCATTATCGAAAAGTCCATGGTCTGACAGCAGCCCAAATCGAGCATCAGCTCAGGATCCGAAGATCCATGCAGGCAGCTGCAAACGCAATAAAATCACCGCCAAAACTACCAATAGAACCAGGAGATGGCGAGGAGCAAGTGAAGGTCTGCACTCTGGAGGATATGGAACTGTTGATACCTACTGTGCTGACGCCAGAAGATTTTTCGCATCCTCAACTTGATGCGGATCAGCTGCGTGATATAGAACAACAATTGGCGAAGTCTTTGCCCGTTGTACAGCCTACCAGCCAACCGGGTGAGCCACCGATAGGAAGTGGCAATAGCGCCAATGTAAGCATAGGTGCCGAGTTTCTGGTCATGCCTGATGGCTCTTTGCAGCAAGTGAATGATGGCGGGGTGGTATTCGAGTACATTGACGATAGTAAAAACGGCAATGCGGCGGCAACTAACATGACATTACAGAGTCTACTGGATGATTCCAAGCCTGACTTAACATATAGTGCAATGGACATCGACTTAAGTCATATGGGCAATGCATTGCCACAGATAAAAGTCAAGCCGAAAGCGCGACCAGCTCCCGCGTCTACTGGCGCTTTGAAACATAAATGCAAGCTGTGTCCAAAAGCATTTCCCACGATGGCACGTCTGAAATCTCATCAATTAACGCATAGTCATTTGCCAAAATTCTACTGCGATCAGTGCTCTTATTATTCGCTACGCAGCGCCGATCTCATCCAGCATTATACGACGGAACACAAGTCCAGCGTTGGCGATAATCGTTCGAATCATGTAGATAGATCGCAATTACTTTTGCCGGCAGATAAAAGTCGCATTTATTCCTGCGATATGTGTCTGTTCGAAGCGCCAACCAGTGGGCAACTACGTGTACACTACAGCGATAAGCATCTGATAGTGCCCAGTGAGGTGCAACTGCGACCCAGTTGGACGCATGAGCCGAAGCAGGGGGGCGCTAATACAATGGTAAACAGTGGCAATGCTTCCAGCCAGCCCGATATTCCACTTGGCATCAAATATCCTCCCATGACGTCAACGGTGTCCACTGCAGCGACAACATTAACAACTGCGTGTGCGCCATCAAGTCTGGAATCaagaacgacaacaacaactgtgggAGCATCTATGAATGAGCTTAATGTTGTGGTGGATACCACATCATTGTTCtatgcagcaactgcagagCAGTTACCGAATACTGATTCGACAACATCAATAACAACTGAAGCTACAGaatcaaatacattttcaatattccCAGAGCAACCGTTTGCTAACAGTctaacaacaccaacaacaacaccgacAACAATTGCTACAGACATGAACGGCGCGTCAACCACCACATCGACCACAACAAATCCAAACACAAGTATATTTGGTGATATGCAAGATTTTATAGATAATACCGATGTGGCTGCCATTTGTACCATACCTGCCGATGATATGCCTGTCGTTGATGGAGATGATATtgttattgataataataatataagtttgGACTTTGATGCGGAAAATCTATTTGAGGATTTTGAAGATGTCGAGGTTGGCGAAGAGGACGAAGAAGACGAGGAGGATGCTGAAAATGAGGatgaaaatgacaacaacGATGCGGCGGCTGATCAGAATCTGTTGCTCACCAGTGACGATGACGATGTTGACGACTTCGATGATGAACAGTCGAAGCATCTGCAAAAACCCTATTGCATCTATTGTAATAAGAAGTTCACTAGCCAATATAAGTTCGAGAACCACATGTTCGTGCATCGCGGTTTGGCGCCCTATCGCTGCGAGCTGTGCACCAATCTGTATAATATGAAACGACTGCTCATTCGACATTATAAGACGGTACATAAGCGCATGCCCACGCGGGACATGGTGCAGGCCAAGGGCGACAAGGTGTCTGTGGCCCGTACAGCCATTGAGAAGATAAATGTTCACGTTGACAAAAATCCCATGGTAATGTGTGCTAAATGTCCATTTGAATGCGAACTGGAGGGTGAAATGCGCAAACATTTAAGTGCGCATCATGGCATAAACGATGgtgGGTCTACGCATGCCAATGAGGTGTTTATCATACGCAAATTGCCCTATGACTGTCCACGCTGTATTCGGTCCTTTGCGGCTAAGCGCACGCTCATAAGACATTTGCAGCGAAGCCATTTAGTGGATACAATTATTGAGATGCAGGCGCCTCAATTGACAACTAGTTCAGCGGCAACCACGACCACTccgacggcaacaacaacattgccTCTCAATTCTAGTGATggcaataaaacaacaacagcaacaacaacatcgggGACAACAACTCAACTTAATTCGAACATATTGGCGCAGCAATTTTCGGAGTCTGTGGATGGCAATGCGAATGGTGgaggcaatggcaacggcgaTGGGAATGGCGATGGCAATGGAAAATGCGACAGGGACACAGGATGCTCAACGGATAATGTAAccacaaatacacaaaccGAAGCAATGCAAGACACAATCGATGCAACCGCAACAGAATCTACAGAATCTAATGGATCTACAGAACCAGCAAACACGGACACCACAGAAGCAGAAACAccattaataacaacaacaacaacaagtgaagaagggccagcaacagcagcaactgctggcTCAACACTCTTTCCAACGCCCATTCCATTTGACTTCGACCTTGATTTTATGGGCGATGGAGAGCATGCCACAACCATTAAGAACAGCGACAGCTTCAGCATTGAACCCAGTCGCAGTCATTTATTGAATGGAACCGATAAGCTATTGACTGCTGCGCTGGAGCCATCGCCAGTTAAAGACCTGCGGACGCGCCTACCCCGTACCCCCATCTTTGTGTGCAAGCAATGTAATCACACCTTCGATGAGCTTGGCAAACTGTTGCAGCATGAGTTGGAGCAACATTCCAGCGGCATTATATCGCCGCGCAATAGTTACCAGCATCAGTGCAAGATCTGCAATACAACATACCGCACCGTAACGCTACTTAACTATCACATGAAACGGCATACGCCAGTAAAAGTTTCATGCAAACAGTGCCCCAAAGAGTTTGTAACCACATCCGAATTGGAGTCGCATTTACTGGCGGAGCATAGCGTCGGATCACCGACGCCTCTCAAATGCGGCATTAATGGCTGTACTAAGACATTTAACTACAAACATCATCTGAAACGACATCAGACTGCCTCCCACACGGCCGTGCAGTATATTTGCCCGGAATGCGGACGCGATATGCTTACTAGTCTGCATCTCAGGAATCATATGTCCAGCCATAAGAGCACACACTCTTACAAGTGTCCCAAATGTGTGCGCACCTATATGAGGCGCAATCCttttcgcAGACATGCGCTTCGTGAGCACAAGTGGGAGCTGACCGAGCAGGAGATTGATCAAATTTACTGCATTAATGATATACAGACTTTGGGTAAATTTCGTGAGCGTAGATCGTTTAAGGTTGAGATCGACCAGTCCGATTAG
Protein Sequence: MASKRVKTEGMETNYKFSCRCCLKSEAEFYKLDSLIECGSGENDASSTKIPLLRLLLFCMRIENQPELPQYICVECSKSLQISYYFIQNGLRAHEILCRKLCPGKLKLNSPRSNGQQPIHRLESNESEDATQPRLWDRKSQKSITRHECKVCGAMVYNRMELKQHIRMHADASSHQCKLCSFVTYKHRQLPEHYRKVHGLTAAQIEHQLRIRRSMQAAANAIKSPPKLPIEPGDGEEQVKVCTLEDMELLIPTVLTPEDFSHPQLDADQLRDIEQQLAKSLPVVQPTSQPGEPPIGSGNSANVSIGAEFLVMPDGSLQQVNDGGVVFEYIDDSKNGNAAATNMTLQSLLDDSKPDLTYSAMDIDLSHMGNALPQIKVKPKARPAPASTGALKHKCKLCPKAFPTMARLKSHQLTHSHLPKFYCDQCSYYSLRSADLIQHYTTEHKSSVGDNRSNHVDRSQLLLPADKSRIYSCDMCLFEAPTSGQLRVHYSDKHLIVPSEVQLRPSWTHEPKQGGANTMVNSGNASSQPDIPLGIKYPPMTSTVSTAATTLTTACAPSSLESRTTTTTVGASMNELNVVVDTTSLFYAATAEQLPNTDSTTSITTEATESNTFSIFPEQPFANSLTTPTTTPTTIATDMNGASTTTSTTTNPNTSIFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEDFEDVEVGEEDEEDEEDAENEDENDNNDAAADQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARTAIEKINVHVDKNPMVMCAKCPFECELEGEMRKHLSAHHGINDGGSTHANEVFIIRKLPYDCPRCIRSFAAKRTLIRHLQRSHLVDTIIEMQAPQLTTSSAATTTTPTATTTLPLNSSDGNKTTTATTTSGTTTQLNSNILAQQFSESVDGNANGGGNGNGDGNGDGNGKCDRDTGCSTDNVTTNTQTEAMQDTIDATATESTESNGSTEPANTDTTEAETPLITTTTTSEEGPATAATAGSTLFPTPIPFDFDLDFMGDGEHATTIKNSDSFSIEPSRSHLLNGTDKLLTAALEPSPVKDLRTRLPRTPIFVCKQCNHTFDELGKLLQHELEQHSSGIISPRNSYQHQCKICNTTYRTVTLLNYHMKRHTPVKVSCKQCPKEFVTTSELESHLLAEHSVGSPTPLKCGINGCTKTFNYKHHLKRHQTASHTAVQYICPECGRDMLTSLHLRNHMSSHKSTHSYKCPKCVRTYMRRNPFRRHALREHKWELTEQEIDQIYCINDIQTLGKFRERRSFKVEIDQSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00512961;
90% Identity: iTF_00473325;
80% Identity: -