Dnav010642.1
Basic Information
- Insect
- Drosophila navojoa
- Gene Symbol
- kn
- Assembly
- GCA_001654015.2
- Location
- NW:313464-346385[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.32 3.9e+03 -4.8 1.2 505 526 20 41 6 63 0.40 2 3 3.9e-234 4.8e-230 764.3 0.1 41 384 112 462 75 466 0.95 3 3 8.4e-07 0.01 13.6 17.1 424 541 469 585 462 589 0.61
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGTGTGGCAGAAAGcgaaacggcaacaacagcaacggcaacagcaattgctactgcgagtgcgagtgcgagtgcgagtgtcACATTGTTGAAAATGACCGCGGGCTTTCATTCCGTGCATTCAGCGACGgcaaatcaacagcagcaagcacacacacacacacacatacacctgcACAGCGACACAGGTGGccacggcagcaacaacaacagcagcagacattCGCATCTGCTGCACGAGGACAATCTGCTGCAGgatcacaatcacaatcaaaccctgagcaacaacaacattaagaTAATGCGCTGTGATGTGAGCCTGGGCATTGGCCGCGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTGCGTAAATCGAATTTCTTTCACTTTGTGATTGCGCTCTACGATCGCGCCGGGCAGCCCATCGAGATCGAGCGAACGGCCTTCATTGGCTTCATCGAGAAGGACTCCGAATCGGATGCCACAAAGACCAACAATGGCATCCAGTACCGACTGCAGTTGCTCTACGCGAATGGTGCCAGACAGGAACAGGACATATTTGTGAGGCTCATCGATTCAGTAACCAAAGCGGCCATCATCTACGAGGGCCAGGATAAGAACCCGGAGATGTGCCGTGTCCTGCTGACGCACGAGGTGATGTGCAGccgctgctgtgATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGATCCCGTCATTATTGATCGctttttCCTGAAGTTCTTCTTGAAGTGCAACCAGAACTGTCTCAAGAATGCTGGCAACCCACGGGACATGCGAAGATTCCAGGTTGTAATCGCCACCCAAGTGGCCGTTGACAGGGAACTGCTGGCCATCTCGGACAATATGTTCGTGCACAATAACTCGAAGCACGGACGCCGCGCCAAGCGACTGGACACCACGGAAGGCCTCTATCCACCTCTGCCCGTGGCCACGCCCTGCATCAAGGCGATATCGCCCAGCGAGGGCTGGACCACAGGTGGCGCCACAGTCATCATTGTGGGCGACAACTTCTTCGACGGCCTGCAAGTGGTGTTCGGCACAATGTTGGTCTGGAGCGAGCTGATCACCTCGCATGCGATACGGGTGCAGACCCCGCCGCGACATATACCCGGCGTGGTCGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGCTCACCCGGACGTTTCGTCTATGTCTCTCTCAATGAACCCACAATCGACTACGGCTTCCAGCGACTGCAGAAGCTCATACCCAGGCATCCCGGCGACCCGGAGAAGCTGCAGAAGGAAATCATTCTTAAGCGCGCCGCAGATCTCGTCGAAGCTCTCTACTCCATGCCCAGCAGATCACCCGGCGGCTCCACCAGCTTCAACTCATACGCCGGCCAGCTGGCGGTGAGCGTGCAGGACGGCAGCGGCCAGTGGACCGAGGATGACTATCAGCGCGCCCAATCGAGCAGCGTCAGTCCACGCGGCGGCtactgcagcagcgcctcaACGCCACACAGCTCGGGTGGCTCGTACGGCGCCACAGCAACCACCGCTGCCGTCGCAGCCACCGCGAACGGCTATGCGCCCGCACCGAATATGGGTACTCTATCCTCATCGCCTGGCAGCGTCTTCAACTCCACTTCAAGAGTCAGCAGCTTGAGCTTCAATCCATTTGCCCTGCCCACCTGCAACACACAGGGCTATAGCACCAGTCAGCTGGTGACATccagtaaataa
- Protein Sequence
- MFAPRRSARVAESETATTATATAIATASASASASVTLLKMTAGFHSVHSATANQQQQAHTHTHIHLHSDTGGHGSNNNSSRHSHLLHEDNLLQDHNHNQTLSNNNIKIMRCDVSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVAVDRELLAISDNMFVHNNSKHGRRAKRLDTTEGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTAAVAATANGYAPAPNMGTLSSSPGSVFNSTSRVSSLSFNPFALPTCNTQGYSTSQLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580491;
- 90% Identity
- iTF_00513966; iTF_01319539; iTF_00472150;
- 80% Identity
- -