Dgri011812.1
Basic Information
- Insect
- Drosophila grimshawi
- Gene Symbol
- kn
- Assembly
- GCA_018153295.1
- Location
- JAECXY010001366.1:11660683-11696049[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-236 5.6e-232 770.9 0.0 39 385 55 408 45 411 0.99 2 2 8.5e-07 0.013 13.6 16.9 424 541 413 529 408 533 0.59
Sequence Information
- Coding Sequence
- ATGGAATGGGGCCGGAAACTGTATCCCACTGCGGGACCCCGATCGGCGGGCGGATTAATGTTCACACTGCCACCCACGGCGGCGGACATGAATCAGCCGCGGGGACCAATGACAGCCATGAAGGACGAACCACTCAGCGGACGCTGGGCAATGCAGCCAGTTGTCGATCAGACCAATTTGGGCATTGGACGCGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTGCGCAAGTCAAATTTCTTTCATTTTGTGATTGCACTTTACGATCGCTCGGGGCAACCCATCGAGATCGAGAGAACGGCCTTCATTGGATTCATCGAGAAGGATTCGGAGTCGGATTCGACAAAGACAAACAATGGCATCCAGTATCGATTACAATTGCTCTACGCCAATGGCGCCCGACAGGAGCAGGACATCTTTGTCAGACTCATCGATTCCGTAACCAAAGCGGCCATCATCTACGAGGGCCAGGACAAGAATCCCGAGATGTGCCGTGTCCTGTTGACGCACGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATCATTGATCGCTTTTTTCTCAAATTCTTCTTGAAGTGCAATCAAAATTGCCTCAAGAATGCTGGCAATCCGCGGGACATGAGAAGATTTCAGGTTGTCATATCCACCCAAGTGGCCGTTGATGGACCACTGCTGGCCATCTCGGATAATATGTTTGTGCACAATAATTCCAAGCATGGCAGACGCGCTAAGCGATTGGACACAACGGAAGGCCTCTACCCACCGCTGCCCGTGGCCACGCCCTGTATCAAGGCGATATCGCCCAGCGAGGGCTGGACAACAGGTGGCGCCACCGTGATCATTGTGGGCGATAATTTCTTCGATGGTTTGCAGGTGGTGTTCGGCACCATGCTGGTGTGGAGCGAACTAATCACATCGCATGCGATACGGGTCCAAACACCGCCCAGACACATCCCCGGTGTGGTTGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCACCCGGTCGCTTTGTCTACGTCTCACTCAACGAACCCACAATCGACTATGGCTTCCAGCGTCTGCAGAAGCTCATCCCACGGCATCCCGGCGATCCCGAGAAACTGCAAAAGGAGATCATACTCAAGCGGGCCGCTGATCTCGTTGAGGCTCTCTACTCCATGCCCAGATCGCCCGGCGGCTCCACTAGCTTCAATTCGTATGCTGGTCAGCTGGCGGTGAGCGTACAGGATGGCTCCGGCCAGTGGACAGAGGATGACTATCAGCGCGCCCAGTCGAGCAGTGTCAGTCCACGTGGTGGCTACTGCAGCAGCGCCTCAACGCCCCACAGTTCGGGTGGCTCCTACGGGGCCACAGCAACCACCGCCAGCGTTGCAGGCACTGCGAATGGTTATGCGCCTGCACCGAATATGGGAACGCTCTCCTCCTCACCCGGCAGCGTCTTCAACTCCACATCAAGGGTCAGCAGCTTGAGCTTCAATCCATTTGCCCTGCCCACCTGCAATACACAGGGCTACAGCACCAGTCAGCTGGTGACATCAACCAAATAA
- Protein Sequence
- MEWGRKLYPTAGPRSAGGLMFTLPPTAADMNQPRGPMTAMKDEPLSGRWAMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRSGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAGTANGYAPAPNMGTLSSSPGSVFNSTSRVSSLSFNPFALPTCNTQGYSTSQLVTSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00554183;
- 80% Identity
- -