Sleb005159.1
Basic Information
- Gene Symbol
- kn
- Assembly
- GCA_003285725.2
- Location
- NW:18956174-19003102[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-238 1.2e-233 776.3 0.0 10 385 19 390 10 393 0.97 2 2 5.6e-08 0.00074 17.5 16.0 422 542 393 511 389 514 0.61
Sequence Information
- Coding Sequence
- ATGTTTTCTCTTCCACCCACGGCCGCGGACATGAATCAGCCGCGCGGGCCCATGACATCTCTAAAGGAGGAGCCCTTGGGTGCGCGTGCCTGGATGCAGCCTGTCGTCGATCAGTCCAACCTCGGCATCGGGCGCGCCCACTTTGAGAAACAGCCGCCCAGTAATTTACGCAAATCGAACTTTTTCCACTTCGTGATTGCGCTCTACGATCGTGCCGGCCAGCCCATCGAGATCGAGCGCACGGCCTTTATTGGTTTCATTGAGAAGGACTCTGAGACGGATGCCACAAAGACCAATAATGGCATTCAGTATCGATTGCAGTTGCTCTACGCAAATGGAGCGCGACAGGAGCAGGACATATTTGTGAGATTAATCGATTCGGTGACAAAGCAGGCTATTATTTACGAAGGCCAGGATAAAAACCCAGAAATGTGCCGTGTTCTATTAACGCACGAAGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGATTTTTCCTGAAGTTCTTCTTGAAGTGCAATCAAAACTGTTTGAAAAATGCCGGCAATCCCAGAGACATGCGCCGATTTCAGGTTGTCATATCCACGCAGGTTGCCGTTGATGGGCCGCTATTGGCTATATCGGACAATATGTTCGTGCACAACAATTCGAAGCACGGACGCCGCGCCAAACGATTGGACACAACGGAAGGTCTCTACCCACCCTTGCCCGTGGCTACGCCCTGCATCAAGGCGATATCACCCAGCGAAGGTTGGACTACGGGCGGAGCCACTGTCATCATTGTGGGGGACAATTTCTTTGATGGCCTGCAGGTGGTGTTCGGCACAATGCTCGTGTGGAGCGAGCTGATCACATCTCATGCGATACGCGTCCAGACGCCACCGCGCCACATACCCGGCGTCGTTGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAGGGATCCCCCGGTCGCTTCGTCTATGTCTCAGCCCTCAATGAGCCCACAATAGACTATGGTTTCCAGCGTTTGCAAAAACTGATTCCCAGACATCCCGGCGATCCGGAGAAACTGCAGAAGGAGATCATCCTAAAGCGCGCTGCTGATCTGGTGGAAGCGCTCTACTCAATGCCTAGATCGCCAGGGGGCTCGACCGGCTTCAACTCTTATGCCGGCCAATTAGCCGTGAGTGTGCAGGATGGATCGGGTCAGTGGACGGAAGACGATTACCAGCGCGCTCAATCGAGCAGCGTCAGTCCCCGCGGTGGCTATTGCAGTAGTGCCTCCACACCACACAGTTCGGGTGGCTCGTACGGCGCCACCGCAACCGCAGCTGTGGCAGCCACCGCCAATGGATATGCACCCACACCCAACATGGGCACGCTTTCCTCCTCGCCGGGCAGCGTCTTCAATTCAACTTCAAgAGTCAGTAGCTTGAGCTTTAACCCGTTCGCTCTACCCACATGCAACACCCAGGGCTATAGCACCAGCCAGCTAGTAACATCAACCAAATAA
- Protein Sequence
- MFSLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSETDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATAAVAATANGYAPTPNMGTLSSSPGSVFNSTSRVSSLSFNPFALPTCNTQGYSTSQLVTSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580491;
- 90% Identity
- iTF_00554183;
- 80% Identity
- -