Basic Information

Insect: Drosophila montana
Gene Symbol: stc
Assembly: GCA_003086615.1
Location: LUVX01010796.1:9251-17796[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5 1.4e+04 -3.7 0.5 15 18 393 396 392 397 0.79

2 16 2 1.9e+04 -4.2 1.6 15 19 420 424 419 424 0.81

3 16 0.058 5.4e+02 0.8 2.0 4 11 453 460 452 461 0.90

4 16 6e-07 0.0056 16.7 15.1 1 19 465 482 465 482 0.93

5 16 1.8 1.6e+04 -3.9 0.9 6 10 508 512 507 512 0.88

6 16 2.3e-08 0.00021 21.3 13.6 1 18 518 535 518 536 0.98

7 16 2 1.9e+04 -6.2 4.1 7 13 540 546 540 547 0.77

8 16 2.1e-09 1.9e-05 24.6 12.9 1 19 576 594 576 594 0.98

9 16 1.2 1.1e+04 -3.4 0.5 5 10 624 629 624 629 0.90

10 16 6.1e-05 0.56 10.3 15.9 4 19 642 657 635 657 0.88

11 16 0.073 6.7e+02 0.5 11.9 1 11 697 707 697 719 0.79

12 16 2.9e-10 2.7e-06 27.3 15.1 1 18 724 741 724 742 0.97

13 16 2 1.9e+04 -4.4 1.2 6 10 771 775 771 775 0.88

14 16 2 1.9e+04 -7.5 10.6 10 18 789 798 778 799 0.78

15 16 2.1e-07 0.002 18.2 15.0 1 16 835 850 835 860 0.93

16 16 5.6e-07 0.0051 16.8 12.9 1 19 867 886 867 886 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5	1.4e+04	-3.7	0.5	15	18	393	396	392	397	0.79
2	16	2	1.9e+04	-4.2	1.6	15	19	420	424	419	424	0.81
3	16	0.058	5.4e+02	0.8	2.0	4	11	453	460	452	461	0.90
4	16	6e-07	0.0056	16.7	15.1	1	19	465	482	465	482	0.93
5	16	1.8	1.6e+04	-3.9	0.9	6	10	508	512	507	512	0.88
6	16	2.3e-08	0.00021	21.3	13.6	1	18	518	535	518	536	0.98
7	16	2	1.9e+04	-6.2	4.1	7	13	540	546	540	547	0.77
8	16	2.1e-09	1.9e-05	24.6	12.9	1	19	576	594	576	594	0.98
9	16	1.2	1.1e+04	-3.4	0.5	5	10	624	629	624	629	0.90
10	16	6.1e-05	0.56	10.3	15.9	4	19	642	657	635	657	0.88
11	16	0.073	6.7e+02	0.5	11.9	1	11	697	707	697	719	0.79
12	16	2.9e-10	2.7e-06	27.3	15.1	1	18	724	741	724	742	0.97
13	16	2	1.9e+04	-4.4	1.2	6	10	771	775	771	775	0.88
14	16	2	1.9e+04	-7.5	10.6	10	18	789	798	778	799	0.78
15	16	2.1e-07	0.002	18.2	15.0	1	16	835	850	835	860	0.93
16	16	5.6e-07	0.0051	16.8	12.9	1	19	867	886	867	886	0.96

Sequence Information

Coding Sequence: aatttcgAGCGAagcaatttaacaaaattcgtGCGCAGCAACAAGGAACACACAAAAACTCGGATCCACTTTTCGCCAGCGTGGGCAAAGCGAAAAAAGAGGAGCGAAAAAAAGCACGCTGCCAAGCGTACGCCATGGCCGAGtattggcagcaacagcagcagcagNNNNNNNNNNNNNNNNNNNNNNNNNNNNAatgggcacaacaacaacaacaactatgtgaattttaatcaatttatcacACAACACAACTTGGCCAGCTCCAGTGTGGGCTACAGCattggcggtggcggcggcgcctTTGGCCTgacgcccagcagcagcgccaccaGCAATttcggcgacggcggcggcaacTTGTATGCGCCAACATTTTATGCCTCTCAAAATGGCGATGGCGCCGTAAGCGGCAACAGTTATAATGCAGCCGCGgccgcagccgctgcttaTCCCAATCCTTATACACCTTTTGGAAATAATCcgtttgctgccgctggcgttGGCTACGATTTCAGCGCTTCCAAGCTGCAGGCCACAGCGCCCGAATTTGTGCCCAATTTTGCCAAGCTCAGTCTGACGTCGGCGTCAGAgacgacggcaacggcggctTTGCCGTCAGCGTCGGCGTCTAACAAAaatcataacaacaacaacaacactgcCACACagccaaatgcagcagcagcagcagcaggcagcaattCTTCACAGCactcgcagccgcagcagctgccacaaagAGCCGACCAGAGGCAGCCGCGGCCGcatggcagcggcaacaatagTCGCCAGCAGCGACGCAACGACTACCGCGAGGATCGCAACGAGGAGCGCTATGAGCGCGGCAAGAAACCGCAAAAGCAACAGCGCTATGACAATCATCGCAGTAATAAGCGACGCGACGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCACGCGCCAACGAGGAGTTGgacacaagcaacagcaatgacAGCGCGCAGCCGTCGCCAGAGAAGCAGTCgtcgcaacagcagctgcaccagcagcaacaaatctCACCAAGACGCGCGCCCGATCATGAAAAGCTGTCGCAGCGGGAAAAGCTAATGCGCGACATTGAGCAGCGGCGTCTGGAGTGCCTGGTCTGTGTGGAGCTGATTAAGGCGCATCATGGCACCTGGTCGTGCCAGAATTGTTATCATGTGCTGCATCTGAAGTGCACAATCACCTGGGCAAGCAGCTCGAAATCCGCCGAGGGCTGGCGTTGCCCCGCCTGCCAGAATGTGCTGGAGGAGCTGCCGCGCGAATATTTGTGCTTCTGTGGCAAACTCAAGAATCCACCGTTGACGCGCACCGAGCTAGCCCACAGCTGCGGTGAGCTGTGCTGCCGTGTCGAGGGCTGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGTCCGTGTCCGCCATGCCAGGCGAATGTCAGtcgcagctgcggctgcgggcGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCACTGCAGTGTGAGGCGATTTGCGACAAGCTGCTCAACTGCGGCGAGCATCGTTGCCAGCAGCCGTGCCATGCGGGCAAGTGTGAGGCGTGCGCggagcaagtgcagcagcattGCCATTGCGGCAAACAGCAGCGCGAGGTGCAGTGCACCCGCGAGAGCCAGGATAAGCGCAGCTATTCGTGCAAAGAGTGCTGCAGCAAGCCGCTGCCCTGCGGCAATCATAAATGCAAGGATTCATGCCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACACAAATCACCAGCTGCCCCTGCGGCAAGCTGCCGGTGCCGGCAacgcagcgcagcagctgcctggaTCCGGTGCCCACCTGCGAGGGCGTCTGCGGCAAAACCCTGCGGTGCGGCAAACCCGCGCATCCGCATCAATGCGCCAGCAAATGCCACCTGGGCCAGTGCCCGTCCTGCCCCAAGCAAACGGCGGTCAAGTGCCGTTGCGGCCACATGGATCAGATGATCAAGTGCCGCCAATTATCTACCCGTGCGGACGATGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGATATCGATCACGCCTGCCCGTTGCCCTGCAATCGCACGCTCAGCTGTGGCCGGCATAAATGCGATCAGCCCTGTCATCGTGGCAATTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGCGGCGCCGAGGTCATTTATCCGCCGGTGCCATGCGGCACCAAGAAGCCCATCTGCAAGCGACCCTGTTCGCGGACGCACGGCTGCGAGCATCCACCACAGCACAATTGCCATGCGGCGTCCAGCTGCCCGCCCTGCATGATGTTCACCACCAAATGGTGCCATGGTAATCACGAACAGCGCAAGACCATACCCTGCTCCCAGGGGAGCTTTAGTTGTGGCCTAGCCTGCGGCAAGCCGCTCGCCTGCGGGCGCCACAAATGCATACGGCCCTGTCATGAGGGCGAATGCCAGCAGCCGGGCGAGCTGTGCCGGCAGAGTTGCACCAAGCCGCGTCCATTGTGCGGCCACAAGTGCGCGGCCGTATGTCATGAGGGCGTCTGTCCTGAAACGCCCTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAGCTGGCACGGGAGCACAGTCGCATTGCCACCGCACAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATTCTGGCgcccaacaagaacaataaatcCAACAAAACcctGAACTGCAATGATGAGTGTCGTCTGTTGGAGCGCAATCGTCGCTTGGCTATTGGATTGCAGTCGCGTAATCCGGAGACGCAGCTCAAGTCGCTGACAAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGCGCTGACTAAGAGCGTCTATGAAACACTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAAAAGTCGAGAAGTCACTCGTTTCCCACAATGAATCGTGAGAAGCGTCAATTGGTGCATGAACTATGCGAAGTTTTTGGCGTGGAGTCTGTTTCCTACGACAAGGAGCCAAATCGTAATGTGGTTGCCACAGCGCACAAGGAGCGGTGCTGGCTACCAGCCACAAGCATCATGGAGGTGCTGGCACGTGAATCTGGACAACGTCGCGTGCCCGTGCCCAGCAACAATGCATGGAGCCTCAAAAAGTAG
Protein Sequence: NFERSNLTKFVRSNKEHTKTRIHFSPAWAKRKKRSEKKHAAKRTPWPSIGSNSSSXXXXXXXXXXNGHNNNNNYVNFNQFITQHNLASSSVGYSIGGGGGAFGLTPSSSATSNFGDGGGNLYAPTFYASQNGDGAVSGNSYNAAAAAAAAYPNPYTPFGNNPFAAAGVGYDFSASKLQATAPEFVPNFAKLSLTSASETTATAALPSASASNKNHNNNNNTATQPNAAAAAAGSNSSQHSQPQQLPQRADQRQPRPHGSGNNSRQQRRNDYREDRNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRANEELDTSNSNDSAQPSPEKQSSQQQLHQQQQISPRRAPDHEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQHCHCGKQQREVQCTRESQDKRSYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPATQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPSCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAASSCPPCMMFTTKWCHGNHEQRKTIPCSQGSFSCGLACGKPLACGRHKCIRPCHEGECQQPGELCRQSCTKPRPLCGHKCAAVCHEGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLNCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00491195;
80% Identity: -