Basic Information

Insect: Drosophila montana
Gene Symbol: -
Assembly: GCA_003086615.1
Location: LUVX01008990.1:73376-78750[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0057 0.49 11.0 1.3 2 23 401 422 400 422 0.94

2 17 4.7 4.1e+02 1.8 3.0 2 17 433 448 432 459 0.75

3 17 5.2 4.5e+02 1.7 0.8 2 23 462 484 462 484 0.91

4 17 0.021 1.8 9.2 0.3 3 23 492 512 490 512 0.95

5 17 7.9e-05 0.0068 16.9 0.3 1 23 520 543 520 543 0.98

6 17 0.00034 0.029 14.9 0.3 2 23 548 569 547 569 0.97

7 17 2.9 2.5e+02 2.5 0.0 1 19 577 595 577 597 0.89

8 17 0.00022 0.019 15.4 1.0 1 22 617 638 617 641 0.90

9 17 0.043 3.7 8.2 1.0 1 21 646 666 646 667 0.92

10 17 0.0018 0.15 12.6 0.8 1 23 686 711 686 711 0.97

11 17 0.03 2.6 8.7 1.6 2 23 727 749 726 749 0.93

12 17 0.0063 0.54 10.9 0.1 3 22 756 775 754 777 0.88

13 17 0.0078 0.67 10.6 0.3 2 23 781 803 780 803 0.96

14 17 5.2e-05 0.0045 17.4 1.7 1 23 809 831 809 831 0.96

15 17 0.021 1.8 9.2 1.7 1 23 835 858 835 858 0.93

16 17 2.9e-06 0.00025 21.4 0.9 1 23 864 887 864 887 0.97

17 17 0.014 1.2 9.8 0.8 1 23 891 919 891 919 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0057	0.49	11.0	1.3	2	23	401	422	400	422	0.94
2	17	4.7	4.1e+02	1.8	3.0	2	17	433	448	432	459	0.75
3	17	5.2	4.5e+02	1.7	0.8	2	23	462	484	462	484	0.91
4	17	0.021	1.8	9.2	0.3	3	23	492	512	490	512	0.95
5	17	7.9e-05	0.0068	16.9	0.3	1	23	520	543	520	543	0.98
6	17	0.00034	0.029	14.9	0.3	2	23	548	569	547	569	0.97
7	17	2.9	2.5e+02	2.5	0.0	1	19	577	595	577	597	0.89
8	17	0.00022	0.019	15.4	1.0	1	22	617	638	617	641	0.90
9	17	0.043	3.7	8.2	1.0	1	21	646	666	646	667	0.92
10	17	0.0018	0.15	12.6	0.8	1	23	686	711	686	711	0.97
11	17	0.03	2.6	8.7	1.6	2	23	727	749	726	749	0.93
12	17	0.0063	0.54	10.9	0.1	3	22	756	775	754	777	0.88
13	17	0.0078	0.67	10.6	0.3	2	23	781	803	780	803	0.96
14	17	5.2e-05	0.0045	17.4	1.7	1	23	809	831	809	831	0.96
15	17	0.021	1.8	9.2	1.7	1	23	835	858	835	858	0.93
16	17	2.9e-06	0.00025	21.4	0.9	1	23	864	887	864	887	0.97
17	17	0.014	1.2	9.8	0.8	1	23	891	919	891	919	0.88

Sequence Information

Coding Sequence: atgtcGGAGAATTCGAATACAAACAACGAAAATGGGCTTAGCTGCCTGCATTGCAGTGCGTACAATTCAAAGCAACAATATCAGGAAATATTCGATGAAGTGGGCATCGAAATTGAACTCGCCGACCTGCTGGccaaatatttccaaatagTTGTCAAGCCAGACACCCAAAAGTCGCAGCTGCTGTGCCAAGAGTGCGTAAATACGCTGATACGTTTCTTTGACATAGACGAATTGCAACGGGAGCAGGATGCCGCCAATGCTGGCAAAAAGGATGCCGTCAAGCTGCAGGAGCTTCCAATTGTGGCGCCGCCCGTGCCCGCAGTTGCCGCCAAAAATGATCCAAAGCCCGCCATAAAGCAGattccgccgccgccgcagcccaAAGTAGCGCCATCAGCGGCAAAAAGTGCGCCAATTGCAGCCAAACGGTCGGCGACATCTATTAAATCAGAGAAACCTCCGTCGGCGGATGCTACGGATACTCCTCCACCAAAAGCCGCTGCAGGAACCCTGGCCATACGCATTACCAAGGCCAGAACTGTTACCCCGAAACGTTTGCCGGCTAAAAATGAAGTGGTCAAAGCAGGCGCAAAAGCAGTCGCCAAaagtcacagcagcagcgaagcCGGGCCAGCGGATCAGGAGCAAATAAGCGCACTAATACGTGACATTCTCGACGATGAGGAGGCGCCAGCAGATGATAAATTTGCTGAGGCAGCAGCCACAGTGCGACAGCTGGAGAAGCAATCAGGCAAGAATAAGCGCCAGCTGAAGGTGCTGGTGGAGCAAGAGCAGCCGGAGGAAGAGTGCCAGGCTCTGAACGAACAGGAAAACAATGAGGAGCTAGAGTTTCTGCTCGAGCCTGATGATGGCTCCTCCGACGTGGATGTGCGTCACTTCAAAGTGGAGCGTAAAGTCAGAAGCGTCAGATCGCAGTCACAGAATGAGAGCCAAAGCGAAGATGAATCATTCAAAGTGGAGCCtttcaatttcgttttaaTCAAGGACTCTGACAACGTTGGCGATCTGCACGAGTATTTGTCCACCGTGGTCAAGACCAGCTTTGAGACCTTGCAATTCGATTGGTCCACGATCTGCCGGAGGATCGCTACAGTTGTCCCATTGAGGGCTGTACGNNACCTGGCCATGCATTTGGTGGTGCTGCATGCGCCCGTGGCGGAAATACCCATTTATGGCAAGTGCCCCGAGTGCAACATAACCTTCTCCAACATATTGCAATACAACAAACACTCCTGCGCGCATGTCATTAAGAAGCGGCGCGGCATTCGCCTGTACTGCGAGATGTGCGGCTTGGAGTTTCCCTCCTGGAAGCGCTTTAATTTCCAcaatcaatttcatttggaGCGCCACAGACCGCGCGTCTGTTTTGTGTGCGACTATGCGGACACCAATATAGATGAGCTATTCCATCATTTGCACTACGCTCACGAGCCCGAGGGCACGCTCTTCTGTGATCTTTGTGATCGCAATTTTCGCGACGCTGCCGTCTTTATGGAGCACAATAAGTCGCATGCGAATGTCAGCAGCACCACCTACAGCTGCTCCGAGTGTAGCGCCAACTTTGAGACACGCGGTCGACTCAATGCTCACATGCGCTCCGTACATGGCAGCGTGATCAGCTGCGAGCTGTGCAGCCGCGAATTTGCCACAGAGGCAACCTACAACCTGCACATGAAGACGCATCTAATCATTGAGCGCGAGGTGCATGTGTGCAGCAATTGCGGGCTGCTTAGCGAGAATAACGACAAAATGATGGCTCACGTCGGAAATGAGGATTCAGCCTGCCTTGGCATGGATGTGTATGCGGAACTGTTGCGCAATGcttatatatgtgaatattgCTCCGCGTACTTCAAGCACAAAAGTGATTTGCGCGCTCATCGCGATTCGGGCGTGCACAAGGATGGCTTCTTCTTTTGTCAGCCTTGTGGCAAGGAGTTTGCCGACATGAAACTCTATCGTCATCATTTGCGCAACTTTCAGCAACAGCGCACGGATGTGGCGCATCGCAAGCTAGAAATTGGTCTGTACTACATGTGTGATTATGAGGATTGCACTGAGTCCTATATAAACTGGAATTCGCTGTACACACATAAGCGACGCACACACGACGCCATCTGCAAGCAGGAGCCTCAGGCCAAGTATAACGAATGGATCTGTCAGTTCTGTCAGAAAGAGTGCCGCTCCAAAATGTCGCTCTCAGTGCACGTGGCGCGAAGTCACAACAACAACAATGTGATTTGTCCGCTGTGCAAGGCCTCGTACAAGGATAAGGAGGCATTGGCCAAACATAACGCCTATTGGCATGAGCCCATCGAATGCCAGCTGTGCCTGAAGGTGGTCAAAAATCGTCGCAACTATGACACACACATGAATGTGGTGCACTCGAATAACAAACGCTACTTGTGCAGTGTCTGCCAAAAAGGTTTTTATCATAAAAGTGAAATGGAGGCGCATCAGCGGCTGCATACCCAGTCGTTCAGCTGCGAGCACTGTAGCTTCATCACGCGGAACAAGAAGTCGCTGTCGGTTCATGTGCTGGGACAGCACTTCAAACGTTTCGCCTTCGAGTGCAAGATCTGCGACAAGCGCTTCGGACGTCGCCAAGGACTATCGAATCATATGCAGCGTGTGCATGGGTCCAGGTATACCTGTCGTGATTTCTTTGACGAGGGCTGCAGCAAGTCCTTTGGTTCCACCACGAAGCTCAATATGCATGTGCGTAAGgtgcacaacagcagcatttaCCTGGAAGATGAGCCAGTCAAGGCGGAggagggcgagggcgagggcgaggaaCTGGAAGACGAGGAGGGATCAACCAGCGAAGGTCCATCCACATCAAAGAAACGCTGCATACGCATCAATGCAAGCACACAAATCGAGTTTATAGGCGACACAGCTGTTGGCGAGGAAAACGAGAGCCTCGCCGGCTCGGAAATCTTTGAGGAGTTTCAGGAGGAGATCAAGGAAGCGGACGCGGAGCcgccaaagaaaaaaaagcaaaggcaatGTTAA
Protein Sequence: MSENSNTNNENGLSCLHCSAYNSKQQYQEIFDEVGIEIELADLLAKYFQIVVKPDTQKSQLLCQECVNTLIRFFDIDELQREQDAANAGKKDAVKLQELPIVAPPVPAVAAKNDPKPAIKQIPPPPQPKVAPSAAKSAPIAAKRSATSIKSEKPPSADATDTPPPKAAAGTLAIRITKARTVTPKRLPAKNEVVKAGAKAVAKSHSSSEAGPADQEQISALIRDILDDEEAPADDKFAEAAATVRQLEKQSGKNKRQLKVLVEQEQPEEECQALNEQENNEELEFLLEPDDGSSDVDVRHFKVERKVRSVRSQSQNESQSEDESFKVEPFNFVLIKDSDNVGDLHEYLSTVVKTSFETLQFDWSTICRRIATVVPLRAVRXLAMHLVVLHAPVAEIPIYGKCPECNITFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRVCFVCDYADTNIDELFHHLHYAHEPEGTLFCDLCDRNFRDAAVFMEHNKSHANVSSTTYSCSECSANFETRGRLNAHMRSVHGSVISCELCSREFATEATYNLHMKTHLIIEREVHVCSNCGLLSENNDKMMAHVGNEDSACLGMDVYAELLRNAYICEYCSAYFKHKSDLRAHRDSGVHKDGFFFCQPCGKEFADMKLYRHHLRNFQQQRTDVAHRKLEIGLYYMCDYEDCTESYINWNSLYTHKRRTHDAICKQEPQAKYNEWICQFCQKECRSKMSLSVHVARSHNNNNVICPLCKASYKDKEALAKHNAYWHEPIECQLCLKVVKNRRNYDTHMNVVHSNNKRYLCSVCQKGFYHKSEMEAHQRLHTQSFSCEHCSFITRNKKSLSVHVLGQHFKRFAFECKICDKRFGRRQGLSNHMQRVHGSRYTCRDFFDEGCSKSFGSTTKLNMHVRKVHNSSIYLEDEPVKAEEGEGEGEELEDEEGSTSEGPSTSKKRCIRINASTQIEFIGDTAVGEENESLAGSEIFEEFQEEIKEADAEPPKKKKQRQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00490945; iTF_00531117; iTF_00617059; iTF_00563341; iTF_00475380; iTF_00526735; iTF_00534744; iTF_00506273;
90% Identity: iTF_00531117;
80% Identity: -