Dmoj016002.1
Basic Information
- Insect
- Drosophila mojavensis
- Gene Symbol
- -
- Assembly
- GCA_018153725.1
- Location
- JAECYD010000073.1:8257283-8259610[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.9 1e+04 -3.6 0.1 11 22 129 140 129 141 0.82 2 4 1e-16 2.7e-13 49.4 0.0 2 45 365 408 364 408 0.95 3 4 0.04 1e+02 2.7 0.0 28 37 438 447 434 452 0.91 4 4 2e-18 5.1e-15 54.9 0.0 2 42 474 514 473 516 0.96
Sequence Information
- Coding Sequence
- ATGAATCACCTGAAATGGATGGGCCACTCGTCCACAATAATGGATATACAGCGCGTTCTGCTACATCAACAAAGCAACAATCAGCAATGCGAAGTATTGCTTGTGGCCAAAGATGGCATCAGCGTACGCGCCCATCTCTTCGTTTTAAGCACTTGCAGCGATTTAATGCGCAATCTGCTTGTCGATTTACCCGCCGGTCAGGAAGCGACTGTCATTTTGCCGGACATCCGTGGAGAGCTGCTCGAGAATGTTCTATCGTTTATTTATATGGGGGAAACTAGTTTGACCTCTGCCCTGCTACCCGAGTTTCTGGGGGCCATAAATTTACTGGGCATCAAATCTGCCATAAGCTTTGATACCAATCCAACATCCATGACGACCTCAAGTGTTATAAGTGGCGCTATGGCTGTCGAAGAAGCCAAATCAATAAGCGGCTTACATATTGCTAATACTGCGCTTATGGAGGAGGAGGAAGAAGAGGATGCCGGAGCTGTTGTCGGTAAATTGGAAGTGGATAATGCCGTACTCACAAATCCTCAACAACAACACGAGCAGGAAGGCCGAACCCTGGAATTCCTAGATGTTTACAGCGAACAGCCCAAAATCACATATTCAATCGAACACATGGGCGGCACAACCAGTGGAAATCAGTATATATATACAGAGAACACGGGAACGTATACCATAACACAGTCATCCGTAGGAAAGTTGGGAGTGCAAGGCAGCTCAGCTGTGGTCGACTCAGTGGAGACAGCTGAGCTAGGTGACGAGGATGTCGAGGCTGAGGTCACAGACGAGCACGAAGAATCCGAGTCACAATTAATCGAGGAAGAATATGTTGGATCGGCAGATCCTTTAATAGAGATGAGCGCAGTGGCGGATGTTGATATGCACGAGGATGGAATGCATGACGGAGACGAGGAGGAGGATGATGAGCTATTGGATGTAAAACCTCGTAAATCTCAGCTCGATATGAAAATTTTAAAATTCAAGGCCCGCCAGCGTCCAGCATCATCGAAAGCAATAAAGAAAGCAATGACCAAACAGCATCAGCAGCACGCAGCGCTTAAAAAAGAATGTAAGGAAGATCTCAATGATGCCCTCGACCTCGCAGCGGCTGCGGTTCTTCACGAAGGCCTCAGCTTGCAGAAAGCTGCTGATCGCTACGACATATCGAAAACCGTACTATGGCGACGTGTGCGCTCGAATCCAGCCTACATGAGAATAAAACGAGAGAAACCTTCGCTTTCGGAAGCATATGAACGCCTAAGGAACGGCGACTCATTGAAAAGCATAAGCCAGGATCTGCATATACCCATGTCGACGCTGCATCGGCACAAAGTGCGTCTGGCCGCACAGGGCCGCCTGCCCCACTTTGTTGCTTGCCGGCGGCGTGACAGTACCCCAAAGGATGAGCTGCGTGAGAAGCTAGCAAAGGCAGTGCATGCCTGCATCAACGATGGCATGACCCAAAATCATGCAGCCAATCTCTTTGAAATACCTAAGAGCACGCTCTGGCGGCACTTGCAACGGCGAACAACCGAGGCGGGGCGTAAAGTCAAGGAGGAGCATGAAGAAGAGGATGATATGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAACACCTTGCGATTGTAGAAATAATGTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRVLLHQQSNNQQCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPAGQEATVILPDIRGELLENVLSFIYMGETSLTSALLPEFLGAINLLGIKSAISFDTNPTSMTTSSVISGAMAVEEAKSISGLHIANTALMEEEEEEDAGAVVGKLEVDNAVLTNPQQQHEQEGRTLEFLDVYSEQPKITYSIEHMGGTTSGNQYIYTENTGTYTITQSSVGKLGVQGSSAVVDSVETAELGDEDVEAEVTDEHEESESQLIEEEYVGSADPLIEMSAVADVDMHEDGMHDGDEEEDDELLDVKPRKSQLDMKILKFKARQRPASSKAIKKAMTKQHQQHAALKKECKEDLNDALDLAAAAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLRNGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPHFVACRRRDSTPKDELREKLAKAVHACINDGMTQNHAANLFEIPKSTLWRHLQRRTTEAGRKVKEEHEEEDDMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHLAIVEIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00549654;
- 90% Identity
- iTF_00546570;
- 80% Identity
- iTF_00549654;