Basic Information

Insect: Drosophila mimica
Gene Symbol: -
Assembly: GCA_037043585.1
Location: JBAMBE010000436.1:4786390-4790286[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.64 42 4.8 4.0 2 23 353 375 352 375 0.96

2 18 8.9 5.8e+02 1.2 0.1 1 23 382 407 382 407 0.88

3 18 0.019 1.2 9.7 1.8 2 23 418 439 418 439 0.93

4 18 5.9 3.8e+02 1.8 3.0 2 17 450 465 449 476 0.75

5 18 0.026 1.7 9.2 0.3 3 23 509 529 507 529 0.95

6 18 0.0022 0.14 12.6 0.3 1 23 537 560 537 560 0.98

7 18 3.5e-05 0.0022 18.3 0.2 2 23 565 586 564 586 0.97

8 18 9.3 6e+02 1.2 0.0 1 19 594 612 594 614 0.76

9 18 0.00029 0.019 15.4 0.4 1 22 634 655 634 658 0.91

10 18 0.79 51 4.6 2.2 3 21 665 683 665 684 0.89

11 18 0.013 0.86 10.1 0.6 1 23 703 728 703 728 0.96

12 18 0.012 0.78 10.3 1.4 2 23 744 766 743 766 0.93

13 18 0.0063 0.41 11.2 0.4 2 23 772 794 771 794 0.92

14 18 0.0025 0.16 12.4 0.2 2 23 798 820 797 820 0.96

15 18 1.4e-05 0.00088 19.5 2.2 1 23 826 848 826 848 0.98

16 18 0.0024 0.15 12.5 1.3 1 23 852 875 852 875 0.93

17 18 3.8e-05 0.0025 18.1 1.5 1 23 881 904 881 904 0.97

18 18 0.0044 0.28 11.7 0.4 1 23 908 936 908 936 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.64	42	4.8	4.0	2	23	353	375	352	375	0.96
2	18	8.9	5.8e+02	1.2	0.1	1	23	382	407	382	407	0.88
3	18	0.019	1.2	9.7	1.8	2	23	418	439	418	439	0.93
4	18	5.9	3.8e+02	1.8	3.0	2	17	450	465	449	476	0.75
5	18	0.026	1.7	9.2	0.3	3	23	509	529	507	529	0.95
6	18	0.0022	0.14	12.6	0.3	1	23	537	560	537	560	0.98
7	18	3.5e-05	0.0022	18.3	0.2	2	23	565	586	564	586	0.97
8	18	9.3	6e+02	1.2	0.0	1	19	594	612	594	614	0.76
9	18	0.00029	0.019	15.4	0.4	1	22	634	655	634	658	0.91
10	18	0.79	51	4.6	2.2	3	21	665	683	665	684	0.89
11	18	0.013	0.86	10.1	0.6	1	23	703	728	703	728	0.96
12	18	0.012	0.78	10.3	1.4	2	23	744	766	743	766	0.93
13	18	0.0063	0.41	11.2	0.4	2	23	772	794	771	794	0.92
14	18	0.0025	0.16	12.4	0.2	2	23	798	820	797	820	0.96
15	18	1.4e-05	0.00088	19.5	2.2	1	23	826	848	826	848	0.98
16	18	0.0024	0.15	12.5	1.3	1	23	852	875	852	875	0.93
17	18	3.8e-05	0.0025	18.1	1.5	1	23	881	904	881	904	0.97
18	18	0.0044	0.28	11.7	0.4	1	23	908	936	908	936	0.89

Sequence Information

Coding Sequence: ATGTcggaaaatgtaaaaactgACGAAATTGTGCCTAGCTGCCTGCATTGCAGAGTGtacaattcaaaacaaaattaccaCGAAATATTCGACGAAGTCGGCATCGAAATAGAGCTCGCCAAACTGCTGCACAAGTATTTCAAGATAAAAGTTGAGCCAACTAACCAGAAACAGAAGCAACTGCTATGCGAGGAGTGCGTTAATACGCTGATTCGATTCTTTGACATCGACGAACTTCAAAGGGAGCAAGATGCCGCAAATGCGGCAACTAAAAAGCGCTCTAACGATACAAAGTCTTCTGCCCCCGAAAAAGCTGAGAATCCTGCCAAAAAGCAGAGAACTGCCGcaaaaaatggccaaaattcACCAAACACCTCGGCAAATGAAGCCACAAAGCAAGATACGCAAACCGCGGCTACTGCTGAAACTGCTACGACTGATACTGCCCCTAATGCTATTGCAAAAGGAGTGCCAGAAATCCTTGGCATTCGCATCATTAGAGCCAGCAACACACCGCCAAAAAGATTGCCCATAAATATGAAGAAAGCAGTCGAGCGAAGTGAAACAGCCGGCGTCAAACGGCGTCGGTCCAGAGAAGTTGCTCAAGGATCAGGAGATCAGGAGCAGATTAGCGCACTTATACGTGACATTCTAGAGGATGAGGAGACGCCAGCGGATGAAAAATTGGTAGAAGCAGCCGCCACAGTCCGTCAGCTGGAGAAACAATCTGCTGAAGAGCAACGGAAGCTGGAGGAGGCGGTGGAAGAGGAGCAAGCGGTGCTCGAGGACCAGGACAATAATGATGAGCTGGAGTTCCTGGTTGAGCGAGAAGATAGCTCCTCTGAATTGAGCGTGCGCCATTTCAAATTGGAGCGAAAAATGAAACGCGCCCCATCCCAGTCACAAAATGAAAGCCAAAGCGAGGATGAAGCATTCAAAGTGGAGCCCTTCAATTTTGTACTGATCAAGGAATCTGATAACATTGGCGATCTATACGAGTATTTGGGAACCGTGGTGAAGACCTGTTTTGAGACTTTGATGTTCGACTGGGACACTGTGTGCCGCCACTGTTCGTTAAAGTGTAGCAAATATGAAAGTTTACTCGGTCACATGCTGAAACTTCACAAGGAGCAAGGCGAGATTTACAAGTGTCCGATTACCGAATGCACGGCAGAGCTACACGGAGCCAAATCCTTGGCCATGCACCTGGTTGTGCTACATGCGCCGGTAGCCGATATCCCCATTTATGGCAGTTGTCCCGAATGCAACATGACCTTCTCAAACATATTGCAGTACAACAAGCACTCCTGCGCGCATGTCATCAAAAAGCGTCGCGGCATTCGCCTGTATTGTGAGATGTGCGGCCTGGAGTTCCCCTCATGGAAGCGCTTTAATTTTCAcaatcaatttcatttggaGCGTCACAGGCCGCGCGCCTGTTTTGTGTGCAGCTATGCAGATACCAACATCGATGAGCTGTTCCATCATTTGCACTACGCTCACGAGCCAGAGGGCTCCCTTTTCTGTGATCTATGTGATCGCAATTTTCGTGATCCTGCCGTCTTTTTGGAGCACAACAAATCACACTCAAGTGTCAGCAGCACCACCTACAACTGCACCGAATGTAGCGCCAATTTTGAGTCACGTGGTCGCCTCAATGGACACCTGcGCACCGCACATGGCAGCGTCATCAGCTGCGAAATGTGCGGCCGCGAGTTTGCCACGGAGGCCACCTACAACCTGCACATGAAAACGCATCTGATTATTGAACGCGAGGTGCATGTGTGCAACAATTGCGGTCTGCTCAGCGAAAATAATGACAGAATGCTGGCTCATGTGGCGGATGAGGATTTGGGTTGCTTTGGCATGGATGTGGTAGTGGAACTGATGCGTGATGCTTATGTTTGTGAATATTGCTCCGCCTACTTTAAGCAGAAGAGTGATTTAAGCGCCCATCGCACTTCGGGGGTGCACAAGGATGGTGAGTTCTGGTGTCAGCCTTGCCGCAAAAAGTTTACCGATATGAAGCTCTATCGTCACCACTTGCGCAACTATCAACAATTGCGCACAGACTTTTCGCATCGCCGACTAGAAATTTGTCTCCACTATATGTGCGATTATGAGAATTGCAGTGAGGCCTATATTAATTGGAATTCgctgtacacacacaaacggCGCACACACGATGCCGTCGAGAAGCAGGAGCCCAAGATAAAGGAAAACGAATGGATCTGTCAGTTCTGTCAGAAAGTGTGCCGCTCCAAAATGTCGCTCTCGGTTCACGTAGCGCGCAGTCACAACAACAATAATGTGGTTTGCTCGCTGTGCAAAGCTTCGTATAAGGATGAGGAGGCGCTAAAGAAGCATCACGCCTATTGGCATGAGCGCATAGAGTGTCCGATGTGCTTGAAGGTGGTGAAGAATCGGCGCAACTTCGACACCCACATAAAGGTGGTGCACTCAAACAATAAGCGTTACTCGTGCAGTGAATGCCAAAAGGGTTTCTATCACAAGAGCGAAATGGAGGCGCATCAGCGGCTGCATTCGCAATCGTTTAAATGCGAACAGTGCAACTTCACCACGAGGAACAAGAAGTCGCTGTCGGTTCATGTGCTGGGACAGCACTACAAGCGTTTTGCCTTCAAGTGTAAGTTCTGCGATAAGCGCTTTGGACGCCGCCAGGGACTGTCGAATCATATTCTACGAGCGCATAGCTCGAAGTACACCTGTCGTGACTTTTTCGATGGCGGTTGTGGCAAATCATTTGGCTCGACGACACGGCTCAATGTGCATGTGCGGAAGGTGCATAACAGCAGCCTCATTCTGTCCGATGACCCAGCCAAATCGGAAGACAacgaagaggaggaggaggagggggggCCGGCTTTTGTGGATTCGGCAGGTGAAGGTCCGTCGACATCGAAAGCGACTATTGAGATTGAATTTATTGCCGATCCGGCTGATGCCGATGACGACAATGAGAATCTGACTGATTCGGAAATCGTCAAAGAGATTCAGAAGACAAAACCAGTAACGAGGCAGCCacgaaaaaccaaaccaaagccGATGACAACGAGAGCTTGA
Protein Sequence: MSENVKTDEIVPSCLHCRVYNSKQNYHEIFDEVGIEIELAKLLHKYFKIKVEPTNQKQKQLLCEECVNTLIRFFDIDELQREQDAANAATKKRSNDTKSSAPEKAENPAKKQRTAAKNGQNSPNTSANEATKQDTQTAATAETATTDTAPNAIAKGVPEILGIRIIRASNTPPKRLPINMKKAVERSETAGVKRRRSREVAQGSGDQEQISALIRDILEDEETPADEKLVEAAATVRQLEKQSAEEQRKLEEAVEEEQAVLEDQDNNDELEFLVEREDSSSELSVRHFKLERKMKRAPSQSQNESQSEDEAFKVEPFNFVLIKESDNIGDLYEYLGTVVKTCFETLMFDWDTVCRHCSLKCSKYESLLGHMLKLHKEQGEIYKCPITECTAELHGAKSLAMHLVVLHAPVADIPIYGSCPECNMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCSYADTNIDELFHHLHYAHEPEGSLFCDLCDRNFRDPAVFLEHNKSHSSVSSTTYNCTECSANFESRGRLNGHLRTAHGSVISCEMCGREFATEATYNLHMKTHLIIEREVHVCNNCGLLSENNDRMLAHVADEDLGCFGMDVVVELMRDAYVCEYCSAYFKQKSDLSAHRTSGVHKDGEFWCQPCRKKFTDMKLYRHHLRNYQQLRTDFSHRRLEICLHYMCDYENCSEAYINWNSLYTHKRRTHDAVEKQEPKIKENEWICQFCQKVCRSKMSLSVHVARSHNNNNVVCSLCKASYKDEEALKKHHAYWHERIECPMCLKVVKNRRNFDTHIKVVHSNNKRYSCSECQKGFYHKSEMEAHQRLHSQSFKCEQCNFTTRNKKSLSVHVLGQHYKRFAFKCKFCDKRFGRRQGLSNHILRAHSSKYTCRDFFDGGCGKSFGSTTRLNVHVRKVHNSSLILSDDPAKSEDNEEEEEEGGPAFVDSAGEGPSTSKATIEIEFIADPADADDDNENLTDSEIVKEIQKTKPVTRQPRKTKPKPMTTRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496807;
90% Identity: iTF_00525331;
80% Identity: -