Dnig016116.1
Basic Information
- Insect
- Drosophila nigritarsus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_035044305.1
- Location
- JAWNMF010000916.1:5816371-5821631[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1 2.3e+03 -1.1 0.1 34 43 203 212 202 214 0.85 2 2 1e-14 1.2e-11 44.7 0.2 3 44 670 711 668 713 0.95
Sequence Information
- Coding Sequence
- ATGAACACACTCGGTCCTAAAAAGGACGGAAGTCCCAACATTGACTTTTTCCAATCGCCAGAGACGCTGCAAGGCTTCGAGTCCATACGACAATGGCTACAAAAGAATTGTAAAAAGTACTTGGCGCACAGTTCGGAGCCGATCACAAAGGAGTCACTTGCCCAACTGCTAATACTTTTTCTTCAATATGTGGAGGCTAAATTGGGCAAAACCTCTGCTGAACCGCCGGCGACAAGAATCCCGATGCGCTGTTTTCTGGATTTTAAAAACGGTGGCGGTCTCTGCATCATTTTCTCGACCATGTTTCGCTTTCGAGCCGAGCAACgtggaaaaaaatttgacttttccATTGGCAAGAATCCGACACGTAAAGATCCCAACATACAACTGCTGATCGAGATCGAGCAGGCACTCGTCGAGGCCGATCTCTATCGCATACCTTACATCTACATCAGGCCAGAGATTGAGAAGAGCTTTGAGGCGCGTCTGCGTGAGATTCTCGACAATCGACGCGTGGAGATCGTTACCGATGAGGAGGATGCGACGCACATTGTCTATCCCGTTGTGGATCCACATCCCGATGAGTACGCTCGTCCCATCTTTAAGCGTGGCAATCATGTCATGCTCCACTGGTACTACTTTCCCGAATCCTATGACTCGTGGACTGTAAATAGCTTCGATTTGCCGGACAATATACCGGAGAATCCGGAATCACCGGCGGAACGCTGGCGAGTCGCCGCTTCTTGGATTTTGGATCTGGAGCAGTATAACGAGTGGATGACTGAGGATGATTACGAGGTGGATGAGcagggcaaaaaaaagatgcacAAGCAACGCATGTCCATCGATGACATCATGTCGTTTGGCGACGACAAAAAGAAGccaaccaccaccagcagcagcagcggtagTGGCACCACCGGTAAACAGAAGCGACGCCGCTCACCGTCGCCCACAACGTCCACATCGACATCGAAGCCGGGCAAGCGAAAGCGTTCCCCGGCCGTCATTCACAAGAAGTTGCgcaacgacgatgacgacgaggaTCTCACCCGCGATCTGGACGATCCGCCGGCTGAGCCCAATATACAGGAGGTGCATAAGGCAACGCATTCGGCGCTACAATCGACAGCCAGCCCAGCTCCAGGTGGCAAATCGCGTGGCGACAACGATATGATGCCCATCAAAGGTGGCACCATGACCGATCTGGATGATGAAATGACTGGCGGTAGTGGCGCTCAAGCTTTGTCCACCGGTGACGGGGACAATTCGCAGACGGGCAAGACAAGCGATAATAGTAATACACAAGAGTTCTCATCCTCGGCCAAGGAGGACATGGAGGACAATGTGACTGAGCAGACGCATCATATCATTGTGCCCTCATATTCGGCCTGGTTCGATTACAACTCAATTCATGTGATTGAGAAGCGCGCCATGCCCGAGTTCttcaacagcaagaacaaatcaaaaacGCCCGAGATTTACATGGCCTATCGCAACTTTATGATTGACACTTACAGGTTGAATCCCACAGAGTACTTAACCAGCACCGCTTGCCGTCGCAATTTGGCCGGCGATGTGTGCGCCATAATGCGGGTGCACGCCTTCCTGGAACAATGGGGTCTCATCAACTATCAGATCGATGCCGATTTGCGTCCTACGCCAATGGGGCCACCACCCACTTCGCACTTTCACATATTGTCGGATACGCCGTCTGGCTTGCAGGCGATCAATCCGCAGAAGACACAGCAGCCGTCGGCGGCCAAGACACTGCTCGATCTGGACAAGAAGCCGCTTGGCAAGGAGGGTGGCGTCATGGAGTGCGACAAGGGCGCTGGCGCAGGCGGCGCCGGCGTTGGCGGTGGCTTGGCCATCAAGACAGACCCACTGGAGAATGGTGCTGCCAGCGGTTTGGCTTCCGGCGTCGGTCAATTTGGTTTGAAGTTGGATCAGTATGCCAAGAAGCCGGCGGCAATGAGGAATCGCACGGCGGCGAGCATGTCGCGCGAGTGGACCGACCAGGAgacactgctgctgctcgagggGCTCGAGATGCACAAGGACGACTGGAATAAGGTGTGCGAACATGTCGGCACACGCACCCAGGACGAATGTATTCTACACTTTCTGCGGCTGCCCATCGAGGACCCGTATCTGGAGGATGATGGCGGCTTCCTGGGTCCGCTTGGCTGCCAGCCAATTCCATTTAGCAAATCCGGCAACCCCATCATGTCAACAGTCGCATTTCTCGCATCAGTTGTCGATCCGCGcgtcgcagctgctgctgccaaagcAGCCATGGAGGAGTTTGCCGCGATTAAAGATGAGGTGCCAGCCACCATTATGGATAACCATATGAAGAACGTGGAGAAGGCCTCCGTCGGCGGCAAATTCAATCCCAATTTCGGTCTGGCCAACAGCGGCATTGCTGGCACAGGCAATGACAAGGACGACGACGAATCCAAggatggcaacaacagcagctcctCGGCACCTGGCCACGATGAGGAAATGAAGGACCTTAACAAAAAAGACgACGACGCCAAGTCCAAAGACAAAACGAAATCGGATAAGCTCAACACAAACACCACAGACTCAAGTtccacatcaacaacaacaacatcaaccacATCAgccacatcaacaacaacaacaacatcatcaacaacagctacaacaacagcaacaataacaacaagcaacacgCCCACCACCAATAACACTGATAAAAAATCTAAAGATTCAAGCGGCGACAAAGCCAATAAAACAAGCGACAACAAAAcgaccaacaacaacgcctCAAACAAAACGGCTTCCAACTCCTCACCCACAGAGACTGGCACCACCAACAGCGATGTGGAGATCAGAACGGAGGACAACAGCGGCGATGGCGAATCCAAGGATACCAGTAACGATgccagcggcggcggcagtgCTTCCGCCAAGGATGGTGGAGGCGCCTTCAGCGAGAACAATATGCAAACGGCAGCGGCGGCTGCCCTGGCCTCGGCTGCCGTCAAGGCCAAACATCTGGCGGCGTTGGAGGAACGTAAGATCAAGTCTCTGGTTGCGCTGCTCGTGGAGACCCAAATGAAGAAACTGGAGATTAAGTTGCGCCACTTTGAGGAGCTGGAGGCGACCATGGAGCGTGAGCGCGAGGGACTCGAATACCAGCGACAGCAGCTCATCACCGAGCGCCAGCAGTTCCATCTGGAGCAGCTGAAGGCGGCCGAGTTCCGAGCGCGCCAACAGGCGCATCATCGCCTGCAACAGGAACTACAGCAGCAGGGACAGCAGGCGGCGGGCGTACCCGCTCCGGGTGCAATGGTCttgccgccgcagcagcagccggcgcagcaccaacagcagcagtcgctgccaccgccgccgccccatcaccaccagcagcagcaacagccaccgccgccacaacaacaacaagcgctGCCACAGCAGTTACAGAATCAGCCACAAACGCTGGCAGCACCTTCGGCGCAGCATCAGCCATTGCCACCGCAcatagctgctgttgcaccgCCGAACGGTGCACCATTTGCAGCGCCGCCAGTTGCGGCGCCAACCGTGGCAGCAGCGCCGCCGCCAGCTGTTGGCGAGCTGCCGCCAGCAGTTGTGGCCCAAGCTCAAGCGCCCACGCCAATGGACACTACACCTCCAGCTAATGCACCACCTGTTGCTGAAGTCTCCGGCGTGTCAGCAGTTGCGGCCAGTGCTGCGCCTGCCCCAAGCATTCCGGCGGCAAGCGTTGCCGCCGCCGTCAATCCTCCTCCTTCAACTTAA
- Protein Sequence
- MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLILFLQYVEAKLGKTSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEEDATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTVNSFDLPDNIPENPESPAERWRVAASWILDLEQYNEWMTEDDYEVDEQGKKKMHKQRMSIDDIMSFGDDKKKPTTTSSSSGSGTTGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKLRNDDDDEDLTRDLDDPPAEPNIQEVHKATHSALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSGAQALSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKEGGVMECDKGAGAGGAGVGGGLAIKTDPLENGAASGLASGVGQFGLKLDQYAKKPAAMRNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASVGGKFNPNFGLANSGIAGTGNDKDDDESKDGNNSSSSAPGHDEEMKDLNKKDDDAKSKDKTKSDKLNTNTTDSSSTSTTTTSTTSATSTTTTTSSTTATTTATITTSNTPTTNNTDKKSKDSSGDKANKTSDNKTTNNNASNKTASNSSPTETGTTNSDVEIRTEDNSGDGESKDTSNDASGGGSASAKDGGGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQQAAGVPAPGAMVLPPQQQPAQHQQQQSLPPPPPHHHQQQQQPPPPQQQQALPQQLQNQPQTLAAPSAQHQPLPPHIAAVAPPNGAPFAAPPVAAPTVAAAPPPAVGELPPAVVAQAQAPTPMDTTPPANAPPVAEVSGVSAVAASAAPAPSIPAASVAAAVNPPPST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00516929;
- 90% Identity
- iTF_00548737;
- 80% Identity
- -