Dmic011090.1
Basic Information
- Insect
- Drosophila micromelanica
- Gene Symbol
- grn
- Assembly
- GCA_004143905.1
- Location
- SCDX01001336.1:3814-18249[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.14 4.2e+02 0.4 0.4 13 26 5 16 4 17 0.72 2 3 5.4e-20 1.6e-16 59.3 4.7 1 35 55 88 55 89 0.98 3 3 1.9e-19 5.8e-16 57.6 6.3 1 35 115 148 115 149 0.97
Sequence Information
- Coding Sequence
- ATGCGAGCCACCCGCCGTGCGGGCTCGAAAACAAAATGCTCGGCATGCCAAAACGGGgcacaggagcagcagcgacagGACACGTGTGATTGTCCTGCTGTGCGGGAGGGTGGGCTACCAGTCGAACCTAGGATAAACACCAGCAAATCACAGGGTCGGGAGTGCGTTAATTGTGGTGCCACTTCAACACCGCTGTGGCGACGCGATGGAACTGGACATTATCTGTGCAATGCCTGTGGCCTCTACTATAAAATGAACGGACAGAATCGGCCACTGATCAAGCCAAAGCGAAGACTGACGCTACAGTCGCTGCAAAGCGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGGCGCAACGCTAGTGGCGAGCCCGTTTGCAATGCCTGCGGATTGTACTACAAGCTGCACAACGTCAATCGTCCACTTACTATGAAAAAGGAGGGCATTCAGACGCGTAACCGCAAGCTCAGCTCCAAgtcgaaaaagaaaaagggcTTGGGCGGCGGCTGTCTGCCGATGGGCGGCCATTTGGGCATGGGCGATTTTAAGCCACTTGATCCGTCCAAGGGCTTTGGCGGCGGCTTCTCGGCCTCAATGGCACAACATGGACACCTTTCCAGCGGGCTGCATCCGGCACATGCGCATATGCATGGCAGTTGGTATACCGGCGGCATGGGTGCATTGGGCGCCTCTGGTGGACTCCAGGGTGGCTTCTCCACGGCCGGTTCGCTCGGCGGCGGCGTTGTGCCCCACTCTCAGCCCTATCACTTGGGTCTCAGCTCAATGGGCACTTGGCGCACTGACTATACGTGA
- Protein Sequence
- MRATRRAGSKTKCSACQNGAQEQQRQDTCDCPAVREGGLPVEPRINTSKSQGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00536425;
- 90% Identity
- iTF_00614567;
- 80% Identity
- -