Dust011228.1
Basic Information
- Insect
- Drosophila ustulata
- Gene Symbol
- grn
- Assembly
- GCA_035047365.1
- Location
- JAWNPT010000094.1:16623097-16628027[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-19 4.3e-16 58.2 6.3 1 35 41 74 41 75 0.97
Sequence Information
- Coding Sequence
- atgtgctgttgttgttgctgttgctgtacgAGCAACATGAACAAGCCACAGCCGCAGACAGAGCCACAGAGACTCACGCTACAGTCGCTGCAGAGCGCGGCCAAGCGGGCGGGAACTTCCTGCGCCAATTGCAagaccacaaccacaaccctTTGGCGACGCAACGCCAGCGGCGAGCCCGTGTGCAACGCCTGCGGATTATACTACAAGCTGCACAACGTCAATCGTCCACTCACCATGAAAAAGGAGGGCATTCAAACGCGTAATCGCAAGCTCAGCTCCAAGTCGAAGAAGAAAAAGGGCTTGGGCGGCGGCTGTCTGCCAATTGGTGGCCACTTGGGCATGGGCGACTTCAAGCCGCTCGATCCGTCCAAGGGCTTCGGCGGCGGCTTCTCTGCATCCATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTACACTGGCGGCATGGGGGCGTTGGGCGCCTCCGGTGGCCTGCAGGGTGGCTTCTCCACGGCCGGTTCGCTGGGCGGCGGCGTCGTGCCCCACTCCCAGCCCTATCACTTGGGCCTCAGCTCGATGGGCACTTGGCGCACAGACTACACGTGA
- Protein Sequence
- MCCCCCCCCTSNMNKPQPQTEPQRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00507275;
- 90% Identity
- iTF_00529224; iTF_01196367; iTF_00576004; iTF_00492621; iTF_00475608; iTF_00258531; iTF_00551240; iTF_01045899; iTF_00521009; iTF_00972723; iTF_01486812; iTF_00806353; iTF_00584088; iTF_00547721; iTF_00557556;
- 80% Identity
- iTF_00551240;