Dmer012245.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- egg
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000154.1:4595659-4600126[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-14 7.1e-11 41.7 0.0 5 75 910 973 907 975 0.90
Sequence Information
- Coding Sequence
- ATGGACTCGGAGTCGGTAACAATGGAGTCGGAAAACGACGATACAGCATCAGTTGGGCCTTCAAGGGAGACCACCGCTTTGCCGGCTGGAGAGACAAGCACACAGACAGAAGCAGAGACGGAACAGGATGAAAAAGCAGAAGGCGAAGAGAAGATGTCTTTGGATGATGATGATCACGATGAGCCATCGAAGGCCACCTCTGAATCCAAAGAATCGGAGAAATCAGATGTCAATGAACAGGACACGAACATCACAGAAATTACATCTGAAGCAAAAACAGAAGAATCATCAATTATTAAACTAGATTCGGCTAAGCCAATTGAAACTGATTTGGATAGCAGCATAGAATTAATCAGTAGCCCGATTTCCGAGCAACTGGAAGCCACAGATAAAGATAAGGCTTCAACTGAGGAAAGTTATGCGGCAAATGAATGTGTTGGCCCTTCAATGGATTCTACTGATGTAGCTAAGTCGACCGAAGATGATTTGGATAGCAGCATTGAACTAATCGAAAGTCCCGCACTAAAGGAACTAACCGAAGCAGATAATACAAAAGTCAGTAAGGCGGACAGTGACAGCAGTATTGAATTAATTAGCAGTCCGGGTAATACCGAAGACAACAAGGGGGAGGAAAACGAATCCAAAACGGACGATAAAGAAAGTGTTAATAGTAACCCTGACCAAGTAGACATAGAAGGGGAAGAAAAGCAAACTATCAACGATAATATCACAgaatcaaaaacaaatatagaaGAGGAAACAATAAAAGAAGCTGAGTCCAATTTAGCTATCGAAACCAAGAGCACAATTGCAGAAGACGAACCGGATAAACCCCAATCGATGACGGTAGTTGAGGAACTGCAGCAGCCCGATGAACCAAACAATGCCCAAAAAGAATCTCTTAATGACGAACCTATGGAAACAGCGTCCAGTCAAGAAGTCGAAAGCAGCTGTTTAGTCAAGGTACAAGAAGAAGATTATACGGAAACTAAGCCCGAGGATGACTCAAAACAATCCGTTGACTATGAAGAGGATAACGAAGTCTACTACAAGAAGGATTGCCTCAACTGCAATTGCGAGAAGCTGCACAAGCAATACGTACGCGCGAGCCTAGCAGCTCTCAACTACTACAAGGTGCCTAGGAAGGCCCACAAGCGgcagtacatatgtatgggttGCTATGACACAGCCATGGACATGTACGAGGATTACGCTGGCCATTTGGTGGCcaagcagccgctgctgttgcgcaGCTTCAACCAGAATCATGCGGACTTTGTAGCGCTCGACAGCAGTGATGAGGAGGAAGACGATGATGAGCAGAGCAAGCCCGAGTTCTCAGCAAATGATTTGGAGCTAATTGAAAACGAGTTAGAGGATGCCATAAAAACTGTAATAAACAGAGTGGATTTGGATGACCAAATGGCTTGGTCCAAGAGCATACTTCAGGCTAAATCGCAGCGCATTACCCAAGAGATCGAGATGGCCAATGAGGAGCTTTCCAAGTTGCAAAATATGGCAGACAAAATGCACTTTGCTTTGTACAGTTCCTGTCAAGTGGTTCACAAGCATCTGCCGCCACTCGACTTTTACCACAACATGAACGACTATGTGCATATTCCACCGGCTGGTGAAATAGAACGTCCACCCATTCAGCTAAACGAAACCTACTATGCAGTAAAGAACAAGGCAATTGCCAGTTGGGTCTCAGTCAAGGTGATTGAGTTCACGGAGAGCTCTACGGTTGGCGGCAACCTGATTAAAAGCTACAAGATCAAATATATGAACACGCCATATCAAATGGTTAAGACCATAACGGCCAAACACTTGGCCTACTTTGAACCGCCGCCAGTCCGTCTAACTATAGGCACTCGTGTTATAGCCTACTTCAATGGCAGCACCTTGTCGCGCGGCAAAGATAAAGGCGTTGTTCCCAGCGCATTCTATCCGGGCATCATAGCGGAACCCTTGAAGCAAACCAATCGATTTagatatctaatattttaCGATGACGGCTATACACAGTATGTGCAGCATAGTGATGTGCGTTTGGTATGCCTGGCGTCAGAAAAAGTGTGGGAGGATGTGCATCCCGGCTCCCGAGACTTTATACAAAAGTATGTGGAAAAGTATTCTGTGGATCGGCCAATGGTGCAGTGCACCCGTGGCCAGAATATGAACACGGAGTCCAATGGCACCTGGTTGTATGCGCGCGTGATTGACATTGATTGCAGCCTGGTGCAGATGCAGTTTGACGATGACAAGAATCATACTGAGTGGATCTATCGTGGTTCCCTGCGTCTAGGTCCCGTGTTCAAGGAGACACAGAACACATCAAACAGCGCCAATGCCATGCAACAGCATCGTGTTCCACGGCGCACTGAGCCCTTCATACGATACACCAAGGAAATGGAGACAAGCAGCAGGCAGGTAAACCAGCAAATGCGCGCCATTGCCCGGAAGAGCAGCTCCGCGCCACAGAACGTAAACATGTCATCGTCGTCatctgcagcagcggctgctgccaatgccgctgctgctgcacaagCAGCCCGGAATACTGTTCGGCATTTGAACAACTCCACCATCTACGTGGACGACGAAAACCGGCCCAAGGGTCACGTCGTCTACTTCACCGCCAAGCGCAATCTGCCACCTAAGATGTATACGCCACATGAATGCACGCCAGCCTGTTTGTTCAAGATCGTTCATCGCCTGGATAGCTACAGTCCGTTGGCCAAGCCGTTGCTCTCTGGTTGGGAACGTTTGGTATTTAAGCAGAAGGCCAAGCGAAACGTTGTCTATCGTGGTCCTTGTGGCAAGAGTTTCCGTAATCTAGCCGAGGTGCACACTTATCTGCGCGCCACCGAGAATGTGCTGAATGTGGAAAACTTTGATTTTACACCAGATCTACGTTGCCTGGCGGAGTACTCCATAGATCCCACTATTGTCAAAGAAGCGGACATATCGAAGGGTCAAGAGAAAATGGCCATTCCACTCGTTAACTATTATGACAACACATTGCCACCGCCGTGTACTTATGCCAAACAGCGCATTCCGACAGAGGGGGTGCATCTTAATCTCGACGAGGAGTTCTTGGTGGGCTGCGATTGTGAAGATGATTGCTCGGACAAATCAAAATGTGCCTGCTGGCAGCTGACGGTTGCGGGTGTCCGCTACTGCAATCCCAACAAGCCGATCGAGGAGATTGGCTATCAGTACAAACGCCTGCACGAGCATGTGCCCACTGGAATTTACGAATGTAACTCACGGTGTAAATGCAAAAAGAACTGTTTAAATCGTGTGGTGCAGCATTCGCTAGAAATGAAGCTGCAGGTGTTCAAGACCTCGAATCGGGGCTGGGGCTTACGCTGCGTCAACGACATACCGAAAGGTGCATTCATCTGCATTTATGCCGGACACTTGCTAACCGAAACAATGGCCAACGAAGGGGGCTTGGATGCCGGCGATGAGTACTTTGCCGATTTGGACTACATTGAGGTGGCCGAGCAGCTGAAAGAGGGCTACGAATCGGATGTTGAGCATTCGGCAGCAGAAGAGGAGGAAGACACTTATGTTCCAGATCCGGAGGATGATGCTGATTTCATGCCCGCTAGGTATTATCAACCGCGCAAAAAGGACAAAATACGAGTCTCCCGCAGCCACTCCACACAATCCGCGGAGCAGGACTCACAGGAGAGAGCTGTGATTAATTTCAATCCGAATGCAGATCTGGATGAAACAGTGCGCGAGAACTCAGTGCGTCGACTCTTCGGCCCAGATGAGGCACCCTACATAATGGATGCCAAAACAACTGGCAATTTGGGGCGCTACTTTAATCATTCGTGTGCGCCCAATTTGTTTGTGCAGAACGTGTTCGTGGACACGCACGATCTGCGTTTTCCCTGGGTTGCTTTCTTCTCGGCCAACCACATACGCTCCGGCACCGAACTTACTTGGAACTACAACTATGAGGTGGGCGTGGTACCTGGCAAAGTTCTATATTGCCAATGCGGAGCACCTAATTGTCGAATACgtttactttaa
- Protein Sequence
- MDSESVTMESENDDTASVGPSRETTALPAGETSTQTEAETEQDEKAEGEEKMSLDDDDHDEPSKATSESKESEKSDVNEQDTNITEITSEAKTEESSIIKLDSAKPIETDLDSSIELISSPISEQLEATDKDKASTEESYAANECVGPSMDSTDVAKSTEDDLDSSIELIESPALKELTEADNTKVSKADSDSSIELISSPGNTEDNKGEENESKTDDKESVNSNPDQVDIEGEEKQTINDNITESKTNIEEETIKEAESNLAIETKSTIAEDEPDKPQSMTVVEELQQPDEPNNAQKESLNDEPMETASSQEVESSCLVKVQEEDYTETKPEDDSKQSVDYEEDNEVYYKKDCLNCNCEKLHKQYVRASLAALNYYKVPRKAHKRQYICMGCYDTAMDMYEDYAGHLVAKQPLLLRSFNQNHADFVALDSSDEEEDDDEQSKPEFSANDLELIENELEDAIKTVINRVDLDDQMAWSKSILQAKSQRITQEIEMANEELSKLQNMADKMHFALYSSCQVVHKHLPPLDFYHNMNDYVHIPPAGEIERPPIQLNETYYAVKNKAIASWVSVKVIEFTESSTVGGNLIKSYKIKYMNTPYQMVKTITAKHLAYFEPPPVRLTIGTRVIAYFNGSTLSRGKDKGVVPSAFYPGIIAEPLKQTNRFRYLIFYDDGYTQYVQHSDVRLVCLASEKVWEDVHPGSRDFIQKYVEKYSVDRPMVQCTRGQNMNTESNGTWLYARVIDIDCSLVQMQFDDDKNHTEWIYRGSLRLGPVFKETQNTSNSANAMQQHRVPRRTEPFIRYTKEMETSSRQVNQQMRAIARKSSSAPQNVNMSSSSSAAAAAANAAAAAQAARNTVRHLNNSTIYVDDENRPKGHVVYFTAKRNLPPKMYTPHECTPACLFKIVHRLDSYSPLAKPLLSGWERLVFKQKAKRNVVYRGPCGKSFRNLAEVHTYLRATENVLNVENFDFTPDLRCLAEYSIDPTIVKEADISKGQEKMAIPLVNYYDNTLPPPCTYAKQRIPTEGVHLNLDEEFLVGCDCEDDCSDKSKCACWQLTVAGVRYCNPNKPIEEIGYQYKRLHEHVPTGIYECNSRCKCKKNCLNRVVQHSLEMKLQVFKTSNRGWGLRCVNDIPKGAFICIYAGHLLTETMANEGGLDAGDEYFADLDYIEVAEQLKEGYESDVEHSAAEEEEDTYVPDPEDDADFMPARYYQPRKKDKIRVSRSHSTQSAEQDSQERAVINFNPNADLDETVRENSVRRLFGPDEAPYIMDAKTTGNLGRYFNHSCAPNLFVQNVFVDTHDLRFPWVAFFSANHIRSGTELTWNYNYEVGVVPGKVLYCQCGAPNCRIRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00516256;
- 90% Identity
- iTF_00516256;
- 80% Identity
- -