Dmea012198.1
Basic Information
- Insect
- Drosophila melanica
- Gene Symbol
- BRDT
- Assembly
- GCA_004143765.1
- Location
- SCDT01000046.1:31850-33575[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.13 2.6e+03 -2.5 4.8 158 214 147 204 132 237 0.53 2 3 0.085 1.7e+03 -1.9 2.7 381 469 244 331 233 355 0.44 3 3 3.9e-09 7.9e-05 22.3 13.5 447 491 503 548 420 552 0.84
Sequence Information
- Coding Sequence
- ATGGCACTTCTGATCAAGCTTAAAATTCCCAATCGTGTGCAACCAGATGTCTTACCACCACCAGGCGCAGTTGGCGTCTACACCAACAAGATGGACTACATGAAGAAGCATCTGCTCGATGAGCTGGCCACGAAAACCTTCGCCCTCGACTTTATGCAGCCGGTGGATACAGAAGCTCTACAGGTACCCACATACTACACCATTATCCAACGACCCATGGACGTAGGCACCATCATCAAGCGTGTTGAGAACCGATACTACCACAGTGTGGATGAGCTAATTACCGATTTTAGGCTGGTCATAAGCAACTGTTATACATTCAATCGACCAGAGGATATGGTCTATCGCAACGGCCAGAAGTTGGAAAAGTTCTTTCTAAAGGTACTCGGTAAGCTGCCCGTGGGCACTGAGGTGCCCAGCACGAGGGATCCCCGAGCGTCGCGCAGTCCGCacgaaaaagagaaaagctCGGCAGGCACGGAGCGTAAATGCCGCGAACAATTGAAAAAGCTTCAAACCTCTAGCTCAGAACACGCAGACATGGATGCTCGTGACTTCTTCAAGGATAAACTGAGTGCAGTTTCGAAGAAGTTGAGCAAGCATCACTTCAAGACGCTCGAGGACTTCCACTTGCACTTGGACGGCTCTCTCTTGCAGTCGCGGAACCAAGCAAGACGAATTTATGAGAACCTATATAATGAGTCGCTCGATAATATATCCTTTTACATGCAGAATAAGGAACTGAGCCAGCTGTTCTATGCGATTCACAAAGACGAAAATGGTTCGCGagagtgcaacaacaaaccacAAACCAGTTGGCAGGACAGTCTAGTGGACGGCCTCGATGCCACGGTCGATAGACTTAGCAATAAGCTCGACTCATGCCGAttagaagaagaggaagatgAGGAAGAGGAGGCAGAATTTATGAGGGGACAACAGATGCTGGCTGCCGAGAGGGAGGAGGACtgtcccagcagcagcagcagcagtcacgGAAATAAGCTCAGCTCGTACATGAACGGATTCGGGCCCAATTCACCCGACAGCAAGGACAACGACGTGCAGGCGGGCTTTGTGAGCGAGGTGGAACGGCGCGCCATTCAGCAACAATTCGTGATGCTTCCCCTGAGCTCCAAGATCGAGATAATGCACATTATCGCGCAGACCGAAGATATATCCACCGACAATTGTGATCTACAGTGGTTCGATATAAAGAACTTTGGCGCCGAGACGCTGAATCTCATGAAAAAAGCCATGCATCCACACACCAAGCTCAATTTACGAAATATGAAGCCCGCCGAGAAGGAAGATCTACAGCGCAGCCTCGAGACGCGACTTCAGAACATCAATCAGGCACTCAACGGCAATCGTCGCAAATACACACATCGACTACGCATTCGTTCCACTGTGCCAGCCAAAAAACGGCCGCGCTTCTCCGCCCCGACGATGCCGAATAAAAGTTGCAGCGGCTTGAAGCTACAGCAGCTACAATCAGGTGCAGGCTCCTCGAAGCCGGGGCAAGACGGACAATCCCCGGCGAGCAGCAGCGAAAGCGACTcgagcagcgacagcgactcgagcagcgacagcgattcgagcgacagcagcgactcCTCCAGTGATAGCGAGAAAGGTAACGCTGGGCAATCACCCTAG
- Protein Sequence
- MALLIKLKIPNRVQPDVLPPPGAVGVYTNKMDYMKKHLLDELATKTFALDFMQPVDTEALQVPTYYTIIQRPMDVGTIIKRVENRYYHSVDELITDFRLVISNCYTFNRPEDMVYRNGQKLEKFFLKVLGKLPVGTEVPSTRDPRASRSPHEKEKSSAGTERKCREQLKKLQTSSSEHADMDARDFFKDKLSAVSKKLSKHHFKTLEDFHLHLDGSLLQSRNQARRIYENLYNESLDNISFYMQNKELSQLFYAIHKDENGSRECNNKPQTSWQDSLVDGLDATVDRLSNKLDSCRLEEEEDEEEEAEFMRGQQMLAAEREEDCPSSSSSSHGNKLSSYMNGFGPNSPDSKDNDVQAGFVSEVERRAIQQQFVMLPLSSKIEIMHIIAQTEDISTDNCDLQWFDIKNFGAETLNLMKKAMHPHTKLNLRNMKPAEKEDLQRSLETRLQNINQALNGNRRKYTHRLRIRSTVPAKKRPRFSAPTMPNKSCSGLKLQQLQSGAGSSKPGQDGQSPASSSESDSSSDSDSSSDSDSSDSSDSSSDSEKGNAGQSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495847;
- 90% Identity
- -
- 80% Identity
- -