Dcol004347.1
Basic Information
- Insect
- Drosophila colorata
- Gene Symbol
- BRDT
- Assembly
- GCA_035041545.1
- Location
- JAWNLD010000233.1:1436513-1438240[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.024 4.1e+02 -0.1 3.1 162 219 152 209 134 268 0.65 2 2 1.6e-09 2.7e-05 23.6 14.6 437 493 495 552 415 554 0.84
Sequence Information
- Coding Sequence
- ATGGCACTTCTGATCAAGCTGAAAATTCCCAATCGTGTACAGCCAGATGTGTTACCAGCTCCAGGCGCAGTAGGCGTCTACACCAACAAAATGGACTACATGAAGAAGCATCTGCTCGATGAGCTGGCCACGAAAACCTTTGCCCTCGACTTTATGCAGCCGGTGGATACGGAGGCTCTACAGGTGCCCACATACTACACCATCATCCAGCGGCCCATGGACGTGGGCACCATCATCAAGCGCGTCCAGAACCGATTCTACCACAGCGTGGACGAGCTGATAACCGACTTTAGGCTAGTGATTAGCAACTGTTACACATTCAATCGACCGGAGGATATGGTCTATCGCAACGGCCAGAAACTAGAAAAGTTCTTTATCAAGGTACTCGGCAAACTGCCCGAGGGCATTGAGGTGCCCAGCACCAGGGATCCCCGAACGTTGCGCAGTCCGCGCGAAAAAGAGAAAAGCTCGGCGGGCACGGAGCGCAAATGCCGCGAACAACTGAAAAAGCTGCAAAGCGCGAACACAGAACAGGCGGACGTGGATGCTCGTGACTTATTCAAGGATAAGCTGAGCTCAGTTTCGAAGAAGCTGAGCAAGCATCACTTCAAGACGCTCGACGACTTCCACTTGCATTTGGACGGCTCCCTCTTGCAGTCGCGGAACCAAGCAAGGAGGATCTTCGAGAATACATACAATGAGTCGCTCGACAGCATATCCTTTCACATGCAGAACAAGGAACTCAGCCAGCTGTTCTATGCCATTCAGAAGGACGAGAATAGCTTGCGAGAGGGCAACCAGGAACCACAGACCAGTTGGGAGGACAGTTTAATAGACGGCCTCGATGCCACGGTCGACAGACTAGGCAGTAAGCTGGACACATGCCGATTCGAcgatgaggaggaggaggaagagGAGGCTGCATTTATGAGGGGACAACAGATAGTGGCTGCCGAGAGGGAGGAGGATTGTcccaacagcagcggcagtcATGGACATAAGGTCAACTCGTTTATAAACGGATTCGGGCCCAACTCACCCGACAGCAAGGACACGGACATGCAGCTGGGCTTCGTCAGCGAGGTGGAACGTCGCGCCATTCAGCAACAATTCGTGATGCTTCCACTGAGCTCCAAGATCGAGATAATGCACATTATTGCGCAGACTGAAGACATATCCACCGACAATTGTGATTTACAGTGGTTCGACATAAAAAACTTTGGCGCCGAGACGCTGAATCTCATGAAGAAAGCCATGCATCCACACACCAAGCTCAATCTACGCAACATGAAGCCCGCCGAGAAGGAGGATCTCCAGCGCAGCCTCGAGACGCGACTGCAAAACATCAATCAGGCGCTCAACGGCAATCGTCGCAAGTACACACACCGACTGCGCATTCGTACCACTGTGCCGGCCAAAAAGAGACCACGCTTCGCCGCCCCGACGATGCCAACCAAAAATTGCAGCGCCTCATCCAGtttgaagcagcagcagcttcagtCAGGTGCGAGCTCCTCGAAGCCAGGCCAAGGCGGGCAAGCCCAGACGAGCAGCAGCGAAAGCGACTcgagcagcgacagcgattcgagcagcgacagcgactcGAGCGACAGCAGCGACTCCTCCAGTGACAGCGGGGACGGTAACCCTGGGCAGTCAGCCTAG
- Protein Sequence
- MALLIKLKIPNRVQPDVLPAPGAVGVYTNKMDYMKKHLLDELATKTFALDFMQPVDTEALQVPTYYTIIQRPMDVGTIIKRVQNRFYHSVDELITDFRLVISNCYTFNRPEDMVYRNGQKLEKFFIKVLGKLPEGIEVPSTRDPRTLRSPREKEKSSAGTERKCREQLKKLQSANTEQADVDARDLFKDKLSSVSKKLSKHHFKTLDDFHLHLDGSLLQSRNQARRIFENTYNESLDSISFHMQNKELSQLFYAIQKDENSLREGNQEPQTSWEDSLIDGLDATVDRLGSKLDTCRFDDEEEEEEEAAFMRGQQIVAAEREEDCPNSSGSHGHKVNSFINGFGPNSPDSKDTDMQLGFVSEVERRAIQQQFVMLPLSSKIEIMHIIAQTEDISTDNCDLQWFDIKNFGAETLNLMKKAMHPHTKLNLRNMKPAEKEDLQRSLETRLQNINQALNGNRRKYTHRLRIRTTVPAKKRPRFAAPTMPTKNCSASSSLKQQQLQSGASSSKPGQGGQAQTSSSESDSSSDSDSSSDSDSSDSSDSSSDSGDGNPGQSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00541747;
- 90% Identity
- -
- 80% Identity
- -