Dmac000911.1
Basic Information
- Insect
- Drosophila macrospina
- Gene Symbol
- -
- Assembly
- GCA_035042075.1
- Location
- JAWNLW010000144.1:185117-186712[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.2e-16 9.5e-13 47.6 0.0 2 45 362 405 361 405 0.95 2 3 0.034 53 3.6 0.0 27 37 434 444 431 449 0.89 3 3 1.5e-20 2.4e-17 62.3 0.0 2 42 471 511 470 513 0.96
Sequence Information
- Coding Sequence
- ATGGGTCACTCGTCCACAATTATGGATATTCAACGCGTTCTTTTGAaccaacaaagcaacaaccaaaGCTGCGAGGTATTGCTGGTGGCCAAAGATGGTATCAGAGTACGGGCACATCTCTTCGTTCTTAGCACATGCAGCGATCTTATGCGAAATCTGTTAGTGGATTTACCTGTCGGTCAGGAGGCTACAGTTATCCTGCCTGACATTCGCGGAGAATTACTGGAGAGCATGTTGTCGTTTATTTATATGGGAGAAACCAGCTTACCATCTGCCCTGCTTACTGAGTTTTTGGAAGCCATTAATCTATTAGGCATCAAGTCAGCCATAAGTTTTGAAACTAATCCCACAGCGATGACCTCCAATGTAAGTGGCGCAATGGCTGTCGAGGCCGCTAAATCTATAAGTGGCTTGCACATTGCGAATACAGCCCTTatggaagaggaggaggaagaggataCCAACGTGGTTGTCGGAAAACTAGAAGTGGGAAATACTGTACTCACTGACCCGCAACAGGCCCAACAGCAAGACGGAAGATCGTTGGAATTCCTTGATGTGTACACTGATCCGCCAAAAATAACATATTCCATTGAGCATATGGGTGGTACATCGAGTGGAAATCAGTACATATTAACGGAGAATACGGGTACATTTACCATAACACAATCCGCATCATCAGTGACGAAATTAGGAGGTCCAGTAGGCTCAGCTGTAGTGGACCAGGTTACCGGTGGTGAGTTGGCAGTAGATGATGCGGAGGCTGATGTTACGGATGACCATGAGGAGTCCGAGTCACATTTAATTGAAGAGGATTATGCGCCATCAGCTGGACCCCTAATAGAAATGGGTAcggatgctgatgttgatatGGCTGATGTTGCAATGCACGAGGAGGACGCCggagaagaggaggaagaagaggaaTTACTAGATGTAAAACCACGCAAATCTCAGCTAGacatgaaaatattaagaacaaAGGTACAGCCGCGATCAACGTCCTCAAAGGCTTCAAAGAAGACAATGActaaacaacaccaacaatatGCGGCCCTCAAAAAGGAAATCAAGGATGATATCAATGATGCGCTGGAATTGGCAGCAGATGCAGTGCTCCACGAGGGTCTCAGTCTTCAAAAAGCTGCGGATCGCTTTGATATATCAAAAACCGTATTGTGGCGACGAGTACGTTCCAATCCGGCCTATATGAGAATAAAACGTGAAAAGCCTTCACTCTCTGAAGCGTATGAGCGCTTAAAGAACGGTGATTCCCTGAAAAGCATTAGCCAAGATTTGAGTATACCCATGTCGACGTTACACCGGCACAAGGTGCGACTTGCGGCCCAAGGTCGTTTACCCGAATTCGTTGCCTGTCGGCGACGGGACAGCACTCCAAAGGACGAACTGCGTGACAAGCTAGCCAAGGCGGTACATGCCTGCATCAATGGAGGAATGTCGCAAAATCATGCGGCAAATCTGTTTGAAATACCCAAAAGTACACTCTGGAGGCACTTGCAGCGTCGGGTCACAGAAGCGGAACGAAAAGTcaaggaggagcaggaggaagaAGACGAGGAAGACGTTCTCAACTAG
- Protein Sequence
- MGHSSTIMDIQRVLLNQQSNNQSCEVLLVAKDGIRVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLPSALLTEFLEAINLLGIKSAISFETNPTAMTSNVSGAMAVEAAKSISGLHIANTALMEEEEEEDTNVVVGKLEVGNTVLTDPQQAQQQDGRSLEFLDVYTDPPKITYSIEHMGGTSSGNQYILTENTGTFTITQSASSVTKLGGPVGSAVVDQVTGGELAVDDAEADVTDDHEESESHLIEEDYAPSAGPLIEMGTDADVDMADVAMHEEDAGEEEEEEELLDVKPRKSQLDMKILRTKVQPRSTSSKASKKTMTKQHQQYAALKKEIKDDINDALELAADAVLHEGLSLQKAADRFDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLSIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELRDKLAKAVHACINGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEEDEEDVLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00549654;
- 90% Identity
- iTF_00510457;
- 80% Identity
- iTF_00537615;