Basic Information

Insect: Drosophila lowei
Gene Symbol: ct
Assembly: GCA_008121275.1
Location: CM017781.1:59487247-59529220[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7.3e-27 5.9e-23 80.5 0.0 3 72 1194 1264 1192 1269 0.95

2 3 7.2e-32 5.8e-28 96.6 0.0 3 77 1682 1757 1680 1759 0.96

3 3 4.4e-31 3.6e-27 94.0 0.0 3 76 1971 2045 1969 2048 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7.3e-27	5.9e-23	80.5	3	72	1194	1264	1192	1269	0.95
2	3	7.2e-32	5.8e-28	96.6	3	77	1682	1757	1680	1759	0.96
3	3	4.4e-31	3.6e-27	94.0	3	76	1971	2045	1969	2048	0.96

Sequence Information

Coding Sequence: ATGAAGTACGTTCTGGAGGGAGATCGTGAGAGTCTACGATCAGGAGTATCAGGAGGATATGGCCAGAAGCGCGCTACCCTTGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTGTCCACCAGCAACACGGATCCCGCCAGCGGCAACATccacagcgacagcgacaaccacagccacaacaCAGGAGGAGCGTCCgccgcaggagcagcagaaggggAAGCAGGAGTTCAGGAGATCGAGGACTCGGATCTGGAACTGGCCAGCGGAGGCGGAGGATCTGGATCTGGCCATCAGCTGAATAGCTCCATTGTTGCAGCGGCCATCACGCTGCAGCAGAACGGCGGCAATCTGCTGGCCAACACCAATACGCCGTCGCCCTCGCCGCCGTTGCTCAGcgccgagcagcagcaacagttgcaGAGCAGTCTGCAGCAGAACGGTGGTGGTGTCGGCGGCGCCTGCCTCAATCCGAAGCTCTTCTTCAATCACGCCCAGCAAATGATGAtggaggcggcggcagctgccgcagcagcagcagcagcagcggcggcggctgtccaacagcagcagcaacatcagcacTCGCCCCTGCATTCCCCAGCAGcggaggcagcagccgcagcggcgGCTGTGGGGCCCACAGATCATCAAACAGTAGCCGAGGCCACTGCAACCACCGCCCAcacagccaccaccaccagcagcagcaacaccaccaacagcagcggcagcggcagcaggagccGTGGCAGCCATCACCACAACGAGGACGAAGAGcaggacgacgacgatgatgaggacGATGAGGAGGAGAACGCCTCCATGCAGTCGAATGCAGCGCATTTagacgatgacgacgatgacaTGGAGCTGGAGCCCCATCAGTCCCTGGAGGCCATCGAGTCTGCGGCAAGAACTGAAccacaccaacagcagcagcagcggcagaggcatcTGGCTGGCGATGCAGGTGATCTGGAGGAGGCGTCTGCTGTGGCGGCTGTTGCGGCTGCCAccgatccagatccagatgaTGAGGAAGCTAGTTTAAATGTTAGCAATAATCACAATACCGATAGCAATAATAGTTGTAGTCGAAAgaacaaaaacagcagcagcaacaacagcgtCGGCACAGGTGTGGCACTGCGTGATAGCAATGATGATATGGATGATCCACATGTGGCAACATCGGTTCATAGTGCCGAGGATGATGACTGTACCAATAACAATACCaataccagcaacaacaacaacaacaatgggggaagcagcaacaacaacaccaacgaGAAGCGCAAGAAGCgtaacaacaacacaaacagcaacagcaacaatcagCCCGCTGTACAAATTGCTGCCAAAGACAAAGAGATTAAAGCACTtctggaggagctgcagcgCCTGCGTGCCCTGGAGCAGACACATCTGGTGCAGATCCAGCGTCTGGAGGAGCATCTGGAGGTGAAGCGACAGCACATCATGCGCCTGGAGGCACGCCTCGACAAGCAGCAGATCAATGAGGCCTTGGCCGAGGCCACCGCCTTGGCTGCCGCCGTCAATGCGGctgccaccaacaacaacaacaacagccagagcagcgacaacaacaagGTGAACGCCGCCTCTCCATTGgagggagcagcagccgccgcagtcgctgccgctgccaacGATCTGGATGCCACCCAGGCCTCAGCCCAGGCTGAggacgatgaggaggaggaagaggaggatgaCCACCAGGCCATGCTCGTGGACAATGACGACGGCGAGGAGGCTGCCTCCGCCAGCTCGCGACTGGCtccccaccagcagcagatcGATGAAGAGGACGATgacgaggaggatgaggaggccGAGAATCAGGATCATGCTGACCCCATGTCAAACCAAACCACAGGCAATGCAGACAGCAACGAGCTGAAAATCAAAAAGGAACAGCACAGTCCTTTGGATCTGAATGTTCTGAGTCCCCAGTCGGCCATTGCGGCCGCGgctgctgccgcagctgccgccgcctgTGCCAACGATCCCAACAAATTCCAGGCCCTGCTCATGGAGCGGACCAAGGCCCTGGCCGCCGAGGCCCTCAAGAATGGTgccgccagtgccagtgccagtgccagcggcagcggcggtgACTCTGCCAATGCGATCAGCGAAGCGATGCCGCCGCCCCCAGACGAGGCCTCCTCCGCTTCCTCCtccacaggagcagcagcagcaacagcagctgcagcacctgccacaggagcagcaggagccgccgccgcgtcccaaaaccaaaccgaaaGTGTAACGCATGAAaatgaaacggaaacggaaatggaaatggaagctGCAACTGAGGCAAACGATGGGCTGGCGGCCACAGTGCGTACAAAGCAAGAGCTCGAAGACGAGAACCAgaacgataacgataacgaaaacgaaaacgaaaacgaggATGAAGACGAAGATGAGGATGAGGCGATATTGCAGCCGCCCGCCACACTCGAAGAGCAGCTGGTCAACAGCTACTGGCGACGCGGCTTCGAGAGCCCCAATCCGCCGCCGCCAAAGCCTGCCCCAACAGTTGccatgccacagccacagccagggAGCAAAACGCCAACAATTTATCAAAATGTCAATGCGGGGCAGCAGCCACAGttgctgccgccaccgccgccgccaccgccaaccttgcaacaacaacaacaacaacactaccaacaacagcagcacggACCCTCGTCCACAGCGTTGCTCAGTCAATTGGTTAACTCCactttctcctcctcctctcgcCTAGATGCCGGATCCCAtccgcaccaccaccaccagcagcagcagcaacagtcgcaccatcagcaccagcagctccaccaacagcaacagcagcagcaccacctcCAGCAACAGTCGCAACACCACAGCAGcggcaccaacagcagcagcaacagcagcagctgtaatTCGGGTCCAGGCAGCACCACCGACGGTGCCCTCAACCACCACCACTCGCATGGGCATGGCCACCACTTGGTGGGCCACAATCCGCACGGCCTGCCCCACGGCCATCCGCACAGCCAGCTGCTGCATCCGGCAGCGGCCCACCACCTGCACCACGCCGACTCCAACTCCTCCAGCGCCAACAGCACCCCCAGCAGCACCGCCCAACTGGCGGCCAGCCTGGCCAGCACCCTCAACGGCAGCAAGTCCCTGCTGcaggcagccgccgccgccaatGCCGCAGCCGTGGCAGCCGGCGCCGTGGCCGaggacaacaacaacggctTGACGCCCAATGCCAatgcagcggcggcggcagcggccaTGGCCGCCCACGCCCAGCATGCTGCGGCCTTGGGACCGGGCTTCCTGCCCAGCCTGCCGGCCTTCCAGTTTGCCGCCGCGGCGGCCGCCAATCAGGATGCGCGCGGACACTATCGGTTCGCGGACGCGGAGATGCAGCTGCCGCCCGGCGCCTCGATGGCCGGCCGCCTGGGAGAGTCACTGATACCCAAAGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGGCCCTGGACACGCTGCACATCTCGCGACGCGTACGGGAGCTGCTCTCCGTGCACAACATAGGCCAGCGGCTGTTCGCCAAATACATCTTGGGCCTGTCGCAGGGCACCGTCTCTGAGCTGCTGAGCAAACCAAAGCCCTGGGACAAGCTGACGGAGAAGGGACGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGACGATAACGCCGTCATGCTGCTCAAGTCGCTGATACCCAAGAAAGATTCGGGCCTGCCCCAGTATGCGGGACGTAGcgctggcggcggcggtggcgatGACTCCATGTCGGAGGACCGCATTGCCCACATCCTGAGCGAGGCCTCCTCCCTGATGAAGAGCACCgccgcccagcagcagcgggacCAGCAGGACCAGCAGCGTCGCCACGCCGGCGAGGACACGCACAGCAACGAGGACAGCAAGTCGCCGCCACAGAGCTGCACATCGCCCTTCTTCAaggtggagcagcagctgaagcagcagcagcaccagcaccgggagcagcagcacatggCCTCCGAGCAGCGGGACGCTGTGGTGGCCgccgcccagcagcagcaccaacagcaccagcagcagcgggagcagcGCGAACGGGAGcgcgaacagcagcagcgactccGCCACGAAGATCTCGCCCAGGACAAGATGGCGCGCCTCTACCAGGAGCTGATAGCCCGCACACCACGCGAGGCAGCCTTCCCCAGCTTTCTGTTGTCGCCCTTCTTTGGAGGGGCCGCCGGCATGCCCGGGGCCGCCAATGCATTCCCAGTTCCCGACGAGAACATGCGCCACGCCTTCGAGCGGGAGATCGccaaactgcagcagcagcaccagcagcagcaggcggcccaggcccaggcccaagcccaGGCGGTGTCCGGCTTCCCCAACTTCTCCAGTCTGATggccctgcagcagcaggtgctCAATGGCGCCCAGGACCTCTCGCTGGGCGCCGTCAAGGATATCAAGCTGAACGGCCAGCGCGGCTCGCtggagcacagcagcagcagctccaagGACGGTGACCGCGAGGATCCACGCGATTATCCGCAGTCGCTGCACGGCCGCAAGTCCGACACCCCGGCCCCGCCAGCACCGCCAGCCCCGCCCTCGGGCAGTGCCGGCAGCGTGCCCGGCTCGGCCAACAGCCTCTCCAGCGCCAGAGACGGCGTTGGAGCCGGAGCAGGATCCGTAGGAGCCGGCAGCCATGCCAGCAACTCGGCCGCCCCCAGTCCGCTAAGCAACTCGATCCTTCCGCCGGCTCTGAGCAACCAGGGTGAGGAGTTTGCGGCCACCGCCAGCCCCCTGCAGCGGATGGCGTCCATCACCAATTCGCTGATCACCCAGCCGCCGGTGACGCCGCACCACAGCACGCCGCAGCGCCCCACCAAGGCGGTACTGCCGCCcatcacccagcagcagttcgACATGTTCAACAACCTGAACACGGAGGACATTGTGCGGCGCGTGAAGGAGGCTCTCTCCCAGTACAGCATCTCGCAGCGCCTCTTCGGTGAGTCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCCGACCTGCTGGCCCGCCCCAAGCCCTGGCACATGCTCACCCAGAAGGGTCGCGAGCCCTTCATCCGCATGAAGATGTTCCTCGAGGACGAGAATGCCGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACCGGCAGCTACTCCGGCAGCCCCCAGATGCCCCAGGGCCTGGCCAGCAAGATGCAGGCCGCCGCCCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCCCAGGCACAGCACATCATGCAGCAGATGCAGGCCGTGGCCATGTCCGCGgccatgcagcagcagcagcaggcggccgctgctgccgccgccgttgccgcccagcagcagagccagcaccagcatccCCATCAGCacccccatccacatccacatccgcaccagcagcaccagcaccagcaggcGGCTGCGGCCGCCCAGGCAGCCGCCGCCCTGCACCACCAGAACATGCTGCTCACGTCACCCGGCCTGCCGCCCCAGCATGCCATCAGCCTGCCAGCCTCGGGCGGTGCTGCCTCCTCCGTCGGCGTTGGGTCCAATCCCGGGGGCCAGGGCAGTGCCGGTGGACCCGCTGGGCCACCCTCAGGACCGGTGGGCGAGAAGAAGCCCATGCTGATGCCTGTGCACGGGGGCGCACATGCGCCCAATGCCATGCGCAGCCTGCATCAGCACATGTCGCCCACCGTCTACGAGATGGCCGCCCTCACCCAGGACCTGGACACGCACGACATCACCACCAAGATCAAGGAGGctctgctggcgaacaacaTCGGCCAGAAGATCTTCGGCGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTGTCGGAGCTTCTCAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGGGAGCCGTTCATCCGGATGCAGCTGTGGCTGAGCGACGCCAACAATGTGGagcggctgcagctgctcaAGAACGAGCGGCGGGAGGCGAGCAAGCGGCGCCGCAGCACCGGCCCCAACCAGCAGGACAACAGCAGCGACACCTCCAGCAACGACACCAACGACTTCTACACCAGCAGCCCCGGACCCGGCTCCGTGGGTTCCGTGGGCGGTGCGCCGCCCAGCAAGAAGCAGCGCGTGCTCTTCTccgaggagcagaaggaggcgcTGCGTCTGGCGTTCGCCCTCGACCCGTACCCCAATGTGGGCACCATCGAGTTCCTGGCCAACGAGCTCAGCCTGGCCACACGGACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTCAAGCAGCAGGTGCCCCACGGCCAGCCCGGCCAGGACAACCCCATACCGAGTCGGGAGAACACCAATGCGACCCCCTTCGATCCCGTCCAGTTCCGCATCCTCCTCCAGCAGCGGCTAGTCGAGCTGCACAAGGAGCGCATGGGCCTGGGCGGAGCGCCCATCCCCTACCCACCGTACTTCGCGGCGGCCGCTATCCTCGGACGCAGTCTGGCGGGGATACCGGGCGCCGCGGCTGCTGCCGGAGCTGCCGCCGCTGCGGCGGCCGTCGGTGCGGCCGGCGTTGGTGTCGGAGatgagctgcagctgcaggccCTCAACCAGGCGTTCAAGGAGCAGATGAGCGGCCTGGACCTTTCCATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTACCAGGACGACCTGGAGATGGATGCCAGCGGCCACAACATGAGCGATAACGAGTCGCTGGAGGGCCAGGAGGCGGAGGACAAGGCCGTCTCCGAGTACGAGAAGATCCTGCAGAAGTCCGCCCTCGCCTCGGCGGCGGCCGCCTACATGAGCAACGCCGTGCGCAGCTCCCGCCGCAAGCCTGCGGCCCCCCAGTGGGTGAACCCCGCTGGCAGCACCACCCCCAATGCGGGactggcagcggcagccgtggcagcggcagcagcagcagccgcagtagCGGCACAGACTGGCGCCGGCAGCGAGAGCGAGCGCATCATCAACGGCGTCTGTGTGATGCAACAGGGCTCCTCCGACTACGGTCGGGACGAGGCTGACGGCAAGTCCGTGGAGGCTGGCGGCGGCGACTCGGAGCACGAGCACGCCCAGCTGGAGATCGACCAGCGGTTCATGGAGCCCGAGGTGCACATCaagcaggaggaggacgacgacgaggaggaggaccagaagcaccagcagctgcagcagcagctggatgGTGGCCTCGACTGCGAGGCGAGCGAGGCGGAGAAGAAGCTGAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGCGTGCGCCGCCTGAGCAGCAACGGCGCCCCAGGCCAGGCGGACTCCGAGGAGTCGTCAGCGGCCTGTATCGCCGCCACAGAAGCTGCTGGCAGCGGGGCTGTGGCAGCCGCCCAGGCGGTAGCCAGTGCCGCGCCAGCAGCCGCGTGGAACTACTAG
Protein Sequence: MKYVLEGDRESLRSGVSGGYGQKRATLAEKEVNTLKEQLSTSNTDPASGNIHSDSDNHSHNTGGASAAGAAEGEAGVQEIEDSDLELASGGGGSGSGHQLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQQNGGGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAVQQQQQHQHSPLHSPAAEAAAAAAAVGPTDHQTVAEATATTAHTATTTSSSNTTNSSGSGSRSRGSHHHNEDEEQDDDDDEDDEEENASMQSNAAHLDDDDDDMELEPHQSLEAIESAARTEPHQQQQQRQRHLAGDAGDLEEASAVAAVAAATDPDPDDEEASLNVSNNHNTDSNNSCSRKNKNSSSNNSVGTGVALRDSNDDMDDPHVATSVHSAEDDDCTNNNTNTSNNNNNNGGSSNNNTNEKRKKRNNNTNSNSNNQPAVQIAAKDKEIKALLEELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNSQSSDNNKVNAASPLEGAAAAAVAAAANDLDATQASAQAEDDEEEEEEDDHQAMLVDNDDGEEAASASSRLAPHQQQIDEEDDDEEDEEAENQDHADPMSNQTTGNADSNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLMERTKALAAEALKNGAASASASASGSGGDSANAISEAMPPPPDEASSASSSTGAAAATAAAAPATGAAGAAAASQNQTESVTHENETETEMEMEAATEANDGLAATVRTKQELEDENQNDNDNENENENEDEDEDEDEAILQPPATLEEQLVNSYWRRGFESPNPPPPKPAPTVAMPQPQPGSKTPTIYQNVNAGQQPQLLPPPPPPPPTLQQQQQQHYQQQQHGPSSTALLSQLVNSTFSSSSRLDAGSHPHHHHQQQQQQSHHQHQQLHQQQQQQHHLQQQSQHHSSGTNSSSNSSSCNSGPGSTTDGALNHHHSHGHGHHLVGHNPHGLPHGHPHSQLLHPAAAHHLHHADSNSSSANSTPSSTAQLAASLASTLNGSKSLLQAAAAANAAAVAAGAVAEDNNNGLTPNANAAAAAAAMAAHAQHAAALGPGFLPSLPAFQFAAAAAANQDARGHYRFADAEMQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRSAGGGGGDDSMSEDRIAHILSEASSLMKSTAAQQQRDQQDQQRRHAGEDTHSNEDSKSPPQSCTSPFFKVEQQLKQQQHQHREQQHMASEQRDAVVAAAQQQHQQHQQQREQREREREQQQRLRHEDLAQDKMARLYQELIARTPREAAFPSFLLSPFFGGAAGMPGAANAFPVPDENMRHAFEREIAKLQQQHQQQQAAQAQAQAQAVSGFPNFSSLMALQQQVLNGAQDLSLGAVKDIKLNGQRGSLEHSSSSSKDGDREDPRDYPQSLHGRKSDTPAPPAPPAPPSGSAGSVPGSANSLSSARDGVGAGAGSVGAGSHASNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQAAALPMQKMMNELKLQEPAQAQHIMQQMQAVAMSAAMQQQQQAAAAAAAVAAQQQSQHQHPHQHPHPHPHPHQQHQHQQAAAAAQAAAALHHQNMLLTSPGLPPQHAISLPASGGAASSVGVGSNPGGQGSAGGPAGPPSGPVGEKKPMLMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLGGAPIPYPPYFAAAAILGRSLAGIPGAAAAAGAAAAAAAVGAAGVGVGDELQLQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDLEMDASGHNMSDNESLEGQEAEDKAVSEYEKILQKSALASAAAAYMSNAVRSSRRKPAAPQWVNPAGSTTPNAGLAAAAVAAAAAAAAVAAQTGAGSESERIINGVCVMQQGSSDYGRDEADGKSVEAGGGDSEHEHAQLEIDQRFMEPEVHIKQEEDDDEEEDQKHQQLQQQLDGGLDCEASEAEKKLKVINEEKLRLVRVRRLSSNGAPGQADSEESSAACIAATEAAGSGAVAAAQAVASAAPAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00471398;
90% Identity: iTF_00535944; iTF_00580615; iTF_00580494; iTF_00473683; iTF_00473570; iTF_00471513; iTF_00471398; iTF_00484345; iTF_00484236; iTF_00517501; iTF_00517611;
80% Identity: iTF_00535944;