g10994.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- ct
- Assembly
- GCA_009870125.2
- Location
- CM020872.1:6355223-6387588[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.2e-27 7.3e-23 80.5 0.0 3 72 1179 1249 1177 1254 0.95 2 3 7.2e-32 7.2e-28 96.6 0.0 3 77 1669 1744 1667 1746 0.96 3 3 4.4e-31 4.4e-27 94.1 0.0 3 76 1956 2030 1954 2033 0.96
Sequence Information
- Coding Sequence
- ATGTTGGAGTGTCCATTGCGCGCTACCCTTGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTGTCCACCAGCAACACGGATCCCGCCAGCGGCAACAtccacagcgacagcgacaaccacagccacaacaCAGGCGGAGCGTCCgccgcaggagcagcagaaggggAAGCAGGAGCTCAGGAGATCGACGATTCGGATCTGGAACTGGCcagcggaggcggaggaggaggatctgGATCTGGCCATCAGCTGAATAGCTCCATTGTTGCAGCGGCCATCACGCTGCAGCAGAACGGCGGCAATCTGCTGGCCAACACCAATACGCCGTCGCCCTCGCCGCCGTTGCTCAgcgccgagcagcagcaacagttgcagAGCAGCCTGCAGCAGAACGGTGGTGGTGTCGGCGGCGCCTGCCTCAATCCGAAGCTCTTCTTCAATCACGCCCAGCAAATGATgatggaggcggcggcagctgccgcagcagcagcagcagcggcggcggctgtccaacagcagcagcatcagcactcTCCCCTGCATTCCCCAGCTGcggaggcagcagccgcagcgtcGGCTGTGGGGCCCACAGATCATCAAACAGTGGCCGAGGCCACTGCAACCACCACCCacacagccaccaccaccagcagcagcagcaacaccaccaacagcagcggcagtggcagcaggagCCGTGGCAGCCATCACCAcaacgaggacgaggagcaggacgacgatgatgatgaggacgatgaggaggagaaCGCCTCCATGCAGTCGAATGCAGCGCATTtggacgatgacgacgatgacatGGAGCTGGAGCCCCATCAGTCCCTGGAGGCCATCGAGTCTGCGGCAAGAACTGAAccacaccaacagcagcagcagcggcagaggcatcTGGCCGGCGATGCAGGTGATCTGGAGGAGGCGTCTGCTGTGGCGGCTGTTGCGGCTGCCACCGATCCAGATCGAGATGATGAGGAAGCTAGTTTAAATGTTAGCAATAATCACAATACCGATAGCAATAATAGTTGTAGtcgaaagaacaaaaacagcagcagcaacaacagcgtcGGCACGGGTGTGGCACTGCGTGATAGCAATGATGATATGGATGATCCACATGTGGCAACATCGGTTCATAGTGCCGAGGATGATGACTGCGCCAATAACAATACCaataccagcaacaacaacaacaacaacaacaatgggggaagcagcaacaacaacaccaacgaGAAGCGCAAGAAGCgtaacaacaacacaaacagcaacagcaacaatcagCCCGCTGTGCAACTTGCTGCCAAAGACAAAGAGATTAAAGCACTtctggaggagctgcagcgccTGCGTGCCCTGGAGCAGACACATCTGGTGCAGATCCAGCGTCTGGAGGAGCATCTGGAGGTGAAGCGACAGCACATCATGCGCCTGGAGGCACGCCTCGACAAGCAGCAGATCAATGAGGCCTTGGCCGAGGCCACCGCCTTGGCTGCCGCCGTCAATGCGGctgccaccaacaacaacaacaacagccagagcagcgacaacaacaaggTGAACGCCGCCTCTCCATTGaagggagcagcagcagccgcagccaacGATCTGGACGCCACCCAGGCCTCAGCCCAGGCTGaggacgatgaggaggaggaagaggaggacgaCCACCAGGCCATGCTCGTGGACAATGACGAGGGCGAGGAGGCAGCCTCCGCCAGCTCGCGGCTGGCtccccaccagcagcagatcgatgaagaggacgatgacgaggaggacgaggatgcCGAGAATCAGGATCATGCTGACCGCATGTCAAACCAAACCACAGCCAATGCAGACAGCAACGAGCTGAAAATCAAAAAGGAACAGCACAGTCCTTTGGATCTGAATGTTCTGAGTCCCCAGTCGGCCATTGCGGCCGCGgctgctgccgcagctgccgccgcctgtgCCAACGATCCCAACAAATTCCAGGCCCTGCTCATGGAGCGGACCAAGGCCCTGGCCGCCGAGGCCCTCAAGAATGGTgccgccagtgccagtggcagtgctagcggcagcggcggtgaCTCTGCCAATGCGATCAGCGAAGCGATGCCGCCGCCCCCAGACGAGGCCTCCTCCGCTTCCTCCTccacaggagcagcagcagcaacagcagctgcagcacctgccacaggagcagcaggagccgccgccgcgtcccaaaaccaaaccgaaaGTGTAACGCATGAAaatgaaacggaaacggaaatggaagCTGCAACTGGGGCAAACGATGGGCTGGCGGCCACAGTGCGTACAAAGCAAGAGCTCGAAGACGAGAATGAGAACGATAACGATAATGataaccaaaacgaaaacgataACGAAAACgaggatgaagatgaagatgaggaTGAGGCGATATTGCAGCCGCCCGCCACACTCGAAGAGCAGCTGGTCAACAGCTACTGGCGACGCGGCTTCGAGAGCCCCAATCCGCCGCCGCCAAAGCCTGCCCCAACAGTTgccatgccacagccacagccacagccagggaGCAAAACGCCAACAGTTTATCAAAATGTCAATGCggggcagcagccacagttgctgccgccaccgccgccgccaccgccaaccttgcaacaacaacaacaacactaccaacaacagcagcacggACCCTCGTCCACAGCGTTGCTCAGTCAATTGGTTAACTCCactttctcctcctcctctcgcCTAGATGCCGGATCCCAtccgcaccaccaccaccagcagcagcagccacagtcgcaccatcagcaccagcagctccaccagcagcaacagcagcagcaccacctccAGCAACAGTCGCAGCAccacagcagcggcaccaacagcagcagcaacagcagcagctgcaattCGGGTCCAGGCAGCACCACCGACGGCGCCCTCAACCACCACCACTCGCACGGGCATGGCCACCATTTGGTCGGGCACAATCCGCACGGCCTGCCCCACGGCCATCCGCACGGGCAGCTGCTGCATCCGGCAGCGGCCCACCACCTGCACCACGCCGACTCCAACTCCTCCAGCGCCAACAGCACCCCCAGCAGCACCGCCCAACTGGCGGCCAGCCTGGCCAGCACCCTCAACGGCAACAAGTCCCTGCTGcaggcagccgccgccgccaatgCCGCAGCCGTGGCAGCCGGCGCCGTGGCCgaggacaacaacaacggcttGACGCCCAACGCCaatgcagcggcggcggcagcggccatGGCCGCCCACGCCCAGCATGCGGCGGCCTTGGGACCGGGCTTCCTGCCCAGCCTGCCGGCCTTCCAGTTTGCCGCCGCGGCGGCCGCCAATCAGGATGCACGCGGACACTATCGGTTCGCGGACGCGGAGATGCAGTTGCCGCCCGGCGCCTCGATGGCCGGTCGCCTGGGAGAGTCACTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGGCCCTGGACACGCTGCACATCTCGCGACGCGTACGGGAGCTGCTCTCCGTGCATAACATAGGCCAGCGGCTGTTCGCCAAATACATCTTGGGCCTGTCGCAGGGCACCGTCTCTGAGCTCCTGAGCAAACCAAAGCCCTGGGACAAGCTGACGGAGAAGGGACGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGACGATAACGCCGTCATGCTGCTCAAGTCGCTGATACCCAAGAAAGATTCGGGCCTGCCCCAGTATGCGGGACGTGgcgctggcggcggcggtggcgatgACTCCATGTCGGAGGACCGCATTGCCCACATCCTGAGCGAGGCCTCCTCCCTGATGAAGAGCACcgccgcccagcagcagcgggaccAGCAGGACCAGCAGCGTCGCCACGCCGGCGAGGACACGCACAGCAACGAGGACAGCAAATCGCCGCCCCAGAGCTGCACATCGCCCTTCTTCAaggtggagcagcagctgaagcagcagcagcaccagcaccgggagcagcagcacatggCCTCCGAGCAGCGGGACGCTGTGGTGGCcgccgcccagcagcagcaccaacagcaccagcagcagcgggagcagcgCGAACGGGAGcgcgaacagcagcagcgactccGCCACGAAGATCTCGCCCAGGACAAGATGGCGCGCCTCTACCAGGAGCTGATAGCCCGCACACCACGCGAGGCAGCCTTCCCCAGCTTTCTGTTGTCGCCCTTCTTTGGAGGGGCCGCCGGCATGCCCGGGGCGGCCAATGCATTCCCAGTTCCCGACGAGAACATGCGCCACGCCTTCGAGCGGGAGATCGctaagctgcagcagcagcaccagcagcagcagcagcaggcggcccaggcccaggcccaagcccaggcGGTGTCCGGCTTTCCCAACTTCTCCAGTCTGATggccctgcagcagcaggtgctCAATGGCGCCCAGGACCTCTCGCTGGGCTCCGTCAAGGATATCAAGCTGAACGGACAGCGCGGCTCGCtggagcacagcagcagcagctccaaggACGGTGACCGCGAGGATCCACGCGACTATCCGCAGTCGCTGCACGGCCGCAAGTCCGACACCCCGGCCCCGCCAGCACCGCCAGCCCCTCCCTCGGGCAGTGCCGGCAGCGTGCCCGGCTCGGCCAACAGCCTCTCCAGCGCCAGGGACGGCGTTGGAGCCGGAGCAGGGTCCGTAGGAGCCGGCAGCCATGCCAGCAACTCGGCCGCCCCCAGTCCGCTGAGCAACTCGATCCTGCCGCCGGCTCTGAGCAACCAGGGCGAGGAGTTTGCGGCCACCGCCAGCCCCCTGCAGCGGATGGCGTCCATCACCAATTCGCTGATCACTCAGCCGCCGGTTACGCCGCACCACAGCACTCCGCAACGCCCCACCAAGGCGGTGCTACCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAACCTCAACACGGAGGACATTGTGCGGCGCGTGAAGGAGGCTCTCTCCCAGTACAGCATCTCGCAGCGCCTCTTCGGTGAGTCGGTGCTGGGCCTGTCCCAGGGCTCCGTCTCCGACCTGCTGGCCCGCCCCAAGCCCTGGCACATGCTCACCCAGAAGGGACGCGAGCCGTTCATCCGCATGAAGATGTTCCTCGAGGACGAGAATGCCGTGCACAAGCTGGTTGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACCGGTAGCTATTCCGGCAGCCCCCAGATGCCCCAGGGCCTGGCCAGCAAGATGCAGGCCGCCGCCCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCCCAGGCCCAGCACATCATGCAGCAGATGCAGGCCGTGGCCATGTCCGCGgcaatgcaacagcagcagcaggcggccgctgctgccgccgccgttgccgcccagcagcagagccagcaccagcatcccCACCAGCAcccccatccacatccgcaccagcagcaccagcaccagcaggcgGCCGCGGCCGCCCAGGCAGCCGCCGCCCTGCACCACCAGAACATGCTGCTCACGTCACCCGGCCTGCCTCCCCAGCATGCCATCAGCCTGCCAGCCTCGGGTGGTGCTGCCTCCGCCGTCGGCGTTGGCTCCAATCCCGGGGGCCAGGGCAATGCCGGTGGACCCGCTGGGCCACCCTCAGGGCCGGTGGGCGAGAAGAAGCCCATGCTGATGCCCGTGCACGGAGGCGCACATGCGCCCAACGCCATGCGCAGCCTGCATCAGCACATGTCGCCCACCGTCTACGAGATGGCCGCCCTCACCCAGGACCTGGACACGCACGACATCACCACCAAGATCAAGGAGGCTCTGCTGGCGAACAACATCGGGCAGAAGATCTTCGGGGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTGTCGGAGCTTCTCAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGGGAGCCGTTCATCCGGATGCAGCTGTGGCTTAGCGACGCCAACAATGTGgagcggctgcagctgctcaaGAACGAGCGGCGGGAGGCGAGCAAGCGGCGCCGCAGCACCGGGCCCAACCAGCaggacaacagcagcgacaCCTCCAGCAACGACACCAACGACTTCTACACCAGCAGCCCCGGACCCGGCTCCGTGGGCTCCGTGGGCGGTGCGCCGCCCAGCAAGAAGCAGCGCGTGCTCTTCTccgaggagcagaaggaggcgcTGCGCCTGGCGTTCGCCCTCGACCCGTACCCCAATGTGGGCACCATCGAGTTCCTGGCCAACGAGCTCAGCCTGGCCACACGGACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTCAAGCAGCAGGTGCCCCACGGCCAGCCCGGCCAGGACAACCCCATACCGAGTCGGGAGAACACCAACGCGACCCCCTTCGATCCCGTCCAGTTCCGCATCCTCCTCCAGCAGCGGCTCGTCGAGCTGCACAAGGAGCGCATGGGCCTGGGCGGAGCGCCCATCCCCTACCCACCGTACTTCGCGGCGGCCGCTATCCTCGGACGCAGTCTGGCGGGGATTCCGGGCGCCGCGGCTGCTGCcggagctgctgccgctgcggcggcCGTCGGTGCGGCTGGCGTTGGTGTCGGAGatgagctgcagctgcaggcccTCAACCAGGCGTTCAAGGAGCAGATGAGCGGCCTGGACCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTACCAGGACGACCTGGAGATGGACGCCAGCGGCCACAACATGAGCGACAACGAGTCGCTGGAGGGCCAGGAGGCGGAGGACAAGGCCGTCTCCGAGTACGAGAAGATCCTGCAGAAGTCCGCCCTCGCCTCGGCGGCAGCCGCCTACATGAGCAACGCCGTGCGCAGCTCCCGCCGCAAGCCTGCGGCCCCCCAGTGGGTGAACCCTGCTGGCAGCACCACCCCCAATGCGGGACTTGCGGCGGCAGccgtggcagcggcagcagcagcggccgcagtAGCGGCACAGTCTGGCGCcggcagcgagagcgagcgCATCATCAACGGCGTCTGTGTGATGCAACAGGGCTCCTCGGACTACGGTCGGGACGAGGCCGATGGCAAGTCCGTGGAGGCTGGCGGCGGCGACTCGGAGCACGAGCACGCTCAGCTGGAGATCGACCAGCGGTTCATGGAGCCCGAGGTGCACATCaagcaggaggaggacgacgacgaggaggaggaccagaagcaccagcagctgcagcagcacctgGATGGTGGCCTCGACTGCGAGGCGAGCGAGGCGGAGAAGAAGCTGAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGCGTGCGCCGCCTGAGCAGCAACGGCACCCCAGGCCAGGCAGACTCCGAGGAGTCGTCGGCGGCCTGTATCACCGCCACAGAAGCTGCTGGCAGCGGGGCTGTGGCAGCCGCCCAGGCGGTAGCCAGTGCCGCGCCAGCAGCCGCGTGGAACTACTAG
- Protein Sequence
- MLECPLRATLAEKEVNTLKEQLSTSNTDPASGNIHSDSDNHSHNTGGASAAGAAEGEAGAQEIDDSDLELASGGGGGGSGSGHQLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQQNGGGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAVQQQQHQHSPLHSPAAEAAAAASAVGPTDHQTVAEATATTTHTATTTSSSSNTTNSSGSGSRSRGSHHHNEDEEQDDDDDEDDEEENASMQSNAAHLDDDDDDMELEPHQSLEAIESAARTEPHQQQQQRQRHLAGDAGDLEEASAVAAVAAATDPDRDDEEASLNVSNNHNTDSNNSCSRKNKNSSSNNSVGTGVALRDSNDDMDDPHVATSVHSAEDDDCANNNTNTSNNNNNNNNGGSSNNNTNEKRKKRNNNTNSNSNNQPAVQLAAKDKEIKALLEELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNSQSSDNNKVNAASPLKGAAAAAANDLDATQASAQAEDDEEEEEEDDHQAMLVDNDEGEEAASASSRLAPHQQQIDEEDDDEEDEDAENQDHADRMSNQTTANADSNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLMERTKALAAEALKNGAASASGSASGSGGDSANAISEAMPPPPDEASSASSSTGAAAATAAAAPATGAAGAAAASQNQTESVTHENETETEMEAATGANDGLAATVRTKQELEDENENDNDNDNQNENDNENEDEDEDEDEAILQPPATLEEQLVNSYWRRGFESPNPPPPKPAPTVAMPQPQPQPGSKTPTVYQNVNAGQQPQLLPPPPPPPPTLQQQQQHYQQQQHGPSSTALLSQLVNSTFSSSSRLDAGSHPHHHHQQQQPQSHHQHQQLHQQQQQQHHLQQQSQHHSSGTNSSSNSSSCNSGPGSTTDGALNHHHSHGHGHHLVGHNPHGLPHGHPHGQLLHPAAAHHLHHADSNSSSANSTPSSTAQLAASLASTLNGNKSLLQAAAAANAAAVAAGAVAEDNNNGLTPNANAAAAAAAMAAHAQHAAALGPGFLPSLPAFQFAAAAAANQDARGHYRFADAEMQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGGGGDDSMSEDRIAHILSEASSLMKSTAAQQQRDQQDQQRRHAGEDTHSNEDSKSPPQSCTSPFFKVEQQLKQQQHQHREQQHMASEQRDAVVAAAQQQHQQHQQQREQREREREQQQRLRHEDLAQDKMARLYQELIARTPREAAFPSFLLSPFFGGAAGMPGAANAFPVPDENMRHAFEREIAKLQQQHQQQQQQAAQAQAQAQAVSGFPNFSSLMALQQQVLNGAQDLSLGSVKDIKLNGQRGSLEHSSSSSKDGDREDPRDYPQSLHGRKSDTPAPPAPPAPPSGSAGSVPGSANSLSSARDGVGAGAGSVGAGSHASNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQAAALPMQKMMNELKLQEPAQAQHIMQQMQAVAMSAAMQQQQQAAAAAAAVAAQQQSQHQHPHQHPHPHPHQQHQHQQAAAAAQAAAALHHQNMLLTSPGLPPQHAISLPASGGAASAVGVGSNPGGQGNAGGPAGPPSGPVGEKKPMLMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLGGAPIPYPPYFAAAAILGRSLAGIPGAAAAAGAAAAAAAVGAAGVGVGDELQLQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDLEMDASGHNMSDNESLEGQEAEDKAVSEYEKILQKSALASAAAAYMSNAVRSSRRKPAAPQWVNPAGSTTPNAGLAAAAVAAAAAAAAVAAQSGAGSESERIINGVCVMQQGSSDYGRDEADGKSVEAGGGDSEHEHAQLEIDQRFMEPEVHIKQEEDDDEEEDQKHQQLQQHLDGGLDCEASEAEKKLKVINEEKLRLVRVRRLSSNGTPGQADSEESSAACITATEAAGSGAVAAAQAVASAAPAAAWNY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00471398;
- 90% Identity
- iTF_00535844;
- 80% Identity
- iTF_00580615;