Basic Information

Insect: Drosophila longiperda
Gene Symbol: -
Assembly: GCA_035042125.1
Location: JAWNLV010000003.1:4272315-4276440[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00026 0.017 15.5 0.2 1 23 149 172 149 172 0.96

2 15 0.0015 0.1 13.1 2.9 2 23 221 243 217 243 0.89

3 15 0.013 0.88 10.1 0.9 1 23 353 376 353 376 0.93

4 15 0.066 4.5 7.9 3.4 2 23 425 446 424 447 0.95

5 15 0.0034 0.23 12.0 0.5 1 23 511 534 511 534 0.88

6 15 2.1 1.4e+02 3.2 0.1 2 14 553 565 552 577 0.85

7 15 0.00073 0.049 14.1 3.3 2 23 585 607 585 607 0.96

8 15 0.00042 0.028 14.8 0.0 1 23 710 733 710 733 0.95

9 15 9.4e-05 0.0063 16.9 0.2 1 23 782 805 782 805 0.94

10 15 0.0012 0.082 13.4 2.2 2 23 855 877 854 877 0.97

11 15 0.0045 0.31 11.6 2.1 1 23 964 987 964 987 0.91

12 15 0.13 8.8 7.0 2.2 1 21 1039 1059 1039 1060 0.95

13 15 0.014 0.96 10.0 0.5 2 23 1098 1122 1097 1122 0.95

14 15 1.5 1e+02 3.7 3.0 1 23 1140 1164 1140 1164 0.91

15 15 8.4 5.7e+02 1.3 0.2 14 23 1197 1207 1195 1207 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00026	0.017	15.5	0.2	1	23	149	172	149	172	0.96
2	15	0.0015	0.1	13.1	2.9	2	23	221	243	217	243	0.89
3	15	0.013	0.88	10.1	0.9	1	23	353	376	353	376	0.93
4	15	0.066	4.5	7.9	3.4	2	23	425	446	424	447	0.95
5	15	0.0034	0.23	12.0	0.5	1	23	511	534	511	534	0.88
6	15	2.1	1.4e+02	3.2	0.1	2	14	553	565	552	577	0.85
7	15	0.00073	0.049	14.1	3.3	2	23	585	607	585	607	0.96
8	15	0.00042	0.028	14.8	0.0	1	23	710	733	710	733	0.95
9	15	9.4e-05	0.0063	16.9	0.2	1	23	782	805	782	805	0.94
10	15	0.0012	0.082	13.4	2.2	2	23	855	877	854	877	0.97
11	15	0.0045	0.31	11.6	2.1	1	23	964	987	964	987	0.91
12	15	0.13	8.8	7.0	2.2	1	21	1039	1059	1039	1060	0.95
13	15	0.014	0.96	10.0	0.5	2	23	1098	1122	1097	1122	0.95
14	15	1.5	1e+02	3.7	3.0	1	23	1140	1164	1140	1164	0.91
15	15	8.4	5.7e+02	1.3	0.2	14	23	1197	1207	1195	1207	0.88

Sequence Information

Coding Sequence: ATGGAAGGTATGGACCTGTGGACGTCCATGTTTTCGGCAGACTTTGAAGAGGCTGATGCTGGACCAAAGAATCAGAGTTATGCCAACGAGTTTATGGGCGATGAGGATGCGGATGAACTGGATACTGCTGATGATAATGTGGAGGCAAGGAAAGGACCTGAACCAGATGACGATGccatatttgattttgaactGGAGCCAATTGTTAGTATTGCGAAACCCGAAACAGCGTCCAGACCAACTGTACGATTGGCGCCACCAATGCCGGTTGCTCCGCCTGTTCGGCCCCAGCAGCATCATCACCCGTCAACGGTTAgttccacctcctcctccctGATGGTAGGTCGCGGTGGTGCTGCCGCACCACCTACACGACCTACAACATCGCAAATCAATGCCACTGATGAGAACGGAGTACCCATTAACTATGAACTGGGTGTCATCTATATATGCCCTGCTTGTGGCTCCGAGTTCCGGCAACAGGATATGTGGAAGCGTCACATGAACCAGATGCATCAGTATAACACTCGCCGTGGCCTCAACTTTGTTGGAATTGATAAGCTGTATCATCGGTGCCTGGAGTGCAACAAGCGGATTGCCATGCACAGTCGGGAAAATCTGCTCAAGCACAAGTTTACCCATTTGCCATATCGTTGCACCAAGTGCTACATCTGCAAGCGCGAGTACAAGTACAGACAGGACCTGATGGTGCATCTGCGCATGGTACACTGTGACGATGTGGTTGCCATGATGCGTGCAGGTGATGACAGTGCTGGACGCAAGACCCGAGTCCGTGAGCCACGCGTCAACCAGCGTGCTCATGGTGCGTCTCGTGTCGGGACGATTGGCCGTAGACCGCTTCGTGATGATCATGATAGTATCGAGGTCAAGAATAAGCTGATGGACACGGAAGCAACGGCTGCCGACGACGTGGATGACGATCAGAATCGCAGCTTCAACCAAGGAAAGAAGAAGCGTGTTAATCAGCTGTCCGACAACGGCGgtgccagtggcagtggcggCAGCGCATCGGATATCTGCGAAGATTACATACACTATATGTGTCCCGATTGTGGCACCGACTGCGACACGCACGCTCAGTGGAGCCAACACATTGAATTTGTGCACGACTATGTCAGCCGGCGCGGACTCAATTTTCGTTGCGTGGACATGCAAATGCAGTGCCTCGAATGCAAGGAGTTTGTCATCCCGAACACAATTAAAACACTGCGCGCACACAAATTCAGTCATTTGGCTCAGCCGGATTGGATGCGTTGCAAGTTATGCTACCAAGGCTATACGGATCATAATGAGCTGGTCACGCATCTGCTCAAACACCATCATCTGGACACATTAATGCCCAaagaggagcaggagcagcaaacAGTTAGTGCCAGTGTCGGCGATGATGCTGAGGAAACCTCTGGCATTGGCAATGGCTGCGATGATGAATCCCCCTTGCAATTTGAGGATGTGCCCCGTCGTGGCGGTCGCATTGGCGGTGATGATATTTATGAGCCGCATATTGATTATCTGTGCCCGCAGTGCGGCCGCGAGTTCATTGAGAAGAAGCACTGGCGCACGCATGTCGTCCAAGTGCATGGCATGAACAATCTGGCCAAGCTAAACTTTGAGGTCATCAATGACCGGCAGCTGAAATGCACAGAATGCGATAAGATCATCACGAATGCCTACGGCATTCAGAATGCCCAACAACATCGGATTACTCATTTGCCCTACAAGGCATATGCACGCTGCcgcaaatgccacaaatcgTATACGGATCGCAAGGGTCTGGTTAAGCATTTGGCCACATACCATTGCGTCGGCTATGAGCCGCGCAATTCCGGTGCTGAAGGAGCAGGAGCCGGTGCAGGACAGAACCAGGTCAAGTCGCAAACGCCACGAAAGCAAATTGTGACTATTGCGAACGAAACGTATGAGATTATCTATTTGGATGACGACCAATCACCgccaaataacaataatgttAATGAGGAGAATGATTTTGGCGAGCAGATGCAAGCGGATGAAGATGACTATGCCACAGGCTGCACCACCACACGGCAGTTGCCACCAGCTGCCGCGGCTGCCACTACCTCTACATCCAATCAAAATGCGAATCGTTATAAATGCGTTGATTGCGGCTCCTTGTTTGCCACGCAGGCAGAACTCAAGGCGCACATTAGCGAGGAGCATGATTTTATTGACACACAGTATAGCGCTAAAAAGTTTGATAAGGCCGAACAAGCAGACGAGACAGCGCCAGTAGCATCGTCTGTGGCAGTCACTTCACCACCCAAAATCTTTTCTGGCTGCTCCACAATCGAacagaattatatatatctgtgtccCTCCTGCGGCAAGCCATACAAGACGCAATTCGAGTGGCGTCGCCACATCAACGAAGAGCACAACTTTGATAAGCGGCAATATTTGAATATGCGACAGCTGGACAAGTATCGCTATCAGTGCACCCAGTGCAAGGACATTGTGAGTAACTCAAAGCTAAAGGGACTCCAGGATCATCACTTTAGACATTTGCCTTATAGGCTCTACTTAAAGTGCCTCGTTTGCGGCACCTGCTACAATCACAAGCCCAACATTGCCGCCCATCTGCGGACGCGGCACAACATCTTTGAGCGTGACACGCCCTGGCGTGAAATGCAGCCAAAGCCACAGCATGGCTATGATACCCTAAAATACAAAGATAAGGATATGCCAGTCATGTCCGCGTCTACGTCGGACTCACCCACgccaggcagcagcagcaacagtggtcGCTCACTGAAACCGCAACCTGGTGTTCTGCCCATGCGACCCGCTGGCCTAAACACACTGGAGGATAGCATCTCCTATCACAATGCTGTCGATTTGGACTTTATCACCTACTTCTGCCCCAAGTGCAACAAGAACTTTGATTCGCACGCCTTCTGGCGCAAGCACATTGTCGAGCAACACAACTTCAACAGCCGGCAGGGCTTGAACTTTCGCCAGATCGACAATCATCACTATCTGTGCCTGGAGTGCTACAAGCGGGTGACAGTCACCCACACCAAGGGCGCCATTGGGCAGCTGCAATCACACAAGTTCCGACATCTTCCATATCGCTCGTTTAAGTGCTTGACCTGTAGCGGAAAATTTGTGCgaaagcaaatgtttttcaagCATTTAAATCGTGACACGAATCGCTGCGACAGCGGAGACCATAATAACGAGGAACACATCGCTGAGCAGCCGGAGAGATCTTCATCAGCAAACGATGCAGCTGATGCCGCCTCGTATCGCTTAATGTGTCCGCAGTGCGGTGATAACttcagcaccagcaccaaatCCCTCTGGCGCAAGCATATTAACACTCAGCATGGTCTAAGCAAGCTGGAGGTGCTGCACATGTGCAAGCTGGGCGATGATCTCTATCGCTGCACTGACTGCAATGAGCAGCTGGAAACGAAACAGCTGCGAGAGCTGCAACACCATCGCTTCCGTCACTTGCCCTATGCCGCCTACATACGTTGCCAGCTGTGCGAACAAGAACAGCAGGATGAACAGGGTCATGGTCCCGTTGCAGCCGGCATGCACAGCATGAGTGAGCTGCAGCAACATATGCGCGACGAGCATCCATCGTTTGTGGGAAACAATGAGCAAATGCAGTCGTTTATCGATGCGGATGAGGACAGCCAGCCGATTGCGGTAGCAAGCAACGAGGCTCCTGACAATGGGTCATATATGCCGATGCCGCTACAAATGATCCTCGATGGCGAGTCTGAGGATGAGGACGAAAACAGCCAAACGGCGGCAGATAATAATGATACGTCCGATGATGGACCATATATGCCCCTGTCGCCGCATTTACTGGAGGAGGACGCAGACGACTTGGAGTTCGAAGATCAATATCTATTGAGCTAA
Protein Sequence: MEGMDLWTSMFSADFEEADAGPKNQSYANEFMGDEDADELDTADDNVEARKGPEPDDDAIFDFELEPIVSIAKPETASRPTVRLAPPMPVAPPVRPQQHHHPSTVSSTSSSLMVGRGGAAAPPTRPTTSQINATDENGVPINYELGVIYICPACGSEFRQQDMWKRHMNQMHQYNTRRGLNFVGIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDDVVAMMRAGDDSAGRKTRVREPRVNQRAHGASRVGTIGRRPLRDDHDSIEVKNKLMDTEATAADDVDDDQNRSFNQGKKKRVNQLSDNGGASGSGGSASDICEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKEFVIPNTIKTLRAHKFSHLAQPDWMRCKLCYQGYTDHNELVTHLLKHHHLDTLMPKEEQEQQTVSASVGDDAEETSGIGNGCDDESPLQFEDVPRRGGRIGGDDIYEPHIDYLCPQCGREFIEKKHWRTHVVQVHGMNNLAKLNFEVINDRQLKCTECDKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHCVGYEPRNSGAEGAGAGAGQNQVKSQTPRKQIVTIANETYEIIYLDDDQSPPNNNNVNEENDFGEQMQADEDDYATGCTTTRQLPPAAAAATTSTSNQNANRYKCVDCGSLFATQAELKAHISEEHDFIDTQYSAKKFDKAEQADETAPVASSVAVTSPPKIFSGCSTIEQNYIYLCPSCGKPYKTQFEWRRHINEEHNFDKRQYLNMRQLDKYRYQCTQCKDIVSNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIFERDTPWREMQPKPQHGYDTLKYKDKDMPVMSASTSDSPTPGSSSNSGRSLKPQPGVLPMRPAGLNTLEDSISYHNAVDLDFITYFCPKCNKNFDSHAFWRKHIVEQHNFNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCSGKFVRKQMFFKHLNRDTNRCDSGDHNNEEHIAEQPERSSSANDAADAASYRLMCPQCGDNFSTSTKSLWRKHINTQHGLSKLEVLHMCKLGDDLYRCTDCNEQLETKQLRELQHHRFRHLPYAAYIRCQLCEQEQQDEQGHGPVAAGMHSMSELQQHMRDEHPSFVGNNEQMQSFIDADEDSQPIAVASNEAPDNGSYMPMPLQMILDGESEDEDENSQTAADNNDTSDDGPYMPLSPHLLEEDADDLEFEDQYLLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00517225;
90% Identity: iTF_00543978;
80% Identity: -