Dleo010773.1
Basic Information
- Insect
- Drosophila leonis
- Gene Symbol
- -
- Assembly
- GCA_035045365.1
- Location
- JAWNPC010000454.1:9146376-9147962[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-17 5.3e-14 51.9 0.0 2 45 360 403 359 403 0.95 2 3 0.06 1.1e+02 2.8 0.0 28 37 433 442 432 447 0.90 3 3 5.9e-18 1.1e-14 54.0 0.0 2 40 469 507 468 513 0.93
Sequence Information
- Coding Sequence
- ATGGGCCACTCGTCCACAATAATGGATATACAGCGCGTTCTGCTACATCAACAAAGCAACAATCAGCAATGCGAAGTATTGCTTGTGGCCAAAGATGGCATCAGCGTACGCGCCCACCTCTTCGTTTTAAGCACTTGCAGTGATTTAATGCGCAATCTGCTGGTCGATTTACCCGCCGGTCAGGAGGCGACTGTCATTTTGCCAGACATCCGTGGTGAGCTGCTCGAGAATGTGTTATCGTTTATTTACATGGGGGAAACTAGTTTAACCTCTGTCATGCTGCCCGAGTTTCTCGGGGCCATTAATTTGCTGGGAATCAAGTCTGCCATAAGCTTTGATACCAATCCAACATCCATGACGACGTCAAATGTTATAAGTGGCGCTATGGCAGTCGAGGAAGCCAAATCAATTAGCGGCTTACATATTGCAAATACAGCTCTtatggaggaggaggaagaagaagatgcgGGAGCTGTAGTTGGCAAATTGGAAGTGGATAATGCCGTACTCACAAATCCTCAACAGCAGCACGATCACGAAGGCCGAACTCTAGAATTCCTGGATGTGTACGGCGAACAGCCCAAAATAACATATTCAATCGAACACATGGGCGGGACAACCAGCGGCaatcagtatatatatacagagaatACGGGAACATTTACTATAACACAATCATCTGTGGCCAAGTTGGGTGTGCAAGGCAGCTCAGCTGTGGTCGACTCTGTGGAGACAGCTGAGCTGGGCGACGAGGATGTCGAGGCTGAGGTTACAGACGAGCACGAAGAATCCGAGTCACAATTAATCGAGGAGGAATATGTGGGATCGGCTGATCCCTTAATAGAGGAGAGCGCAGAGGCGGACGTTGATATGCATGAAGATGGAATGCATGATGGcgacgaggaggaggatgatgaGCTGTTGGATGTAAAGCCTCGCAAATCTCATCTCgatatgaaaatgttaaaatctAAGGCACTCCAGCGCCCAGCATCATCAGCGAAGGCAACGAAGAAAACAATGACcaaacagcatcaacaacacGCAGCACTTAAAAAAGAATGCAAGGAGGATATCAATGACGCCCTCGATCTCGCAGTGGCTGCCGTACTTCACGAAGGCCTCAGTTTGCAAAAAGCTGCTGATCGCTACGACATATCGAAAACTGTGCTATGGCGACGTGTGCGTTCGAATCCAGCCTACATGAGAATAAAACGAGAGAAGCCTTCGCTTTCGGAAGCGTATGAGCGCCTGAAAAACGGCGATTCGTTGAAAAGCATAAGCCAGGATCTACATATACCCATGTCGACGCTGCATCGGCACAAGGTGCGTCTTGCAGCACAGGGCCGCCTGCCCGACTTCGTTGCTTGCCGGCGACGCGACAGCACCCCAAAGGATGAGCTACGTGAAAAGCTAGCAAAGGCAGTGCATGCCTGCATTAACGATGGCATGACTCAAAACCATGCAGCTAATCTCTTTGAAATACCTAAGAGCACGCTCTGGCGGCACTTGCAACGGCGCGGGAACGAGGTGCAGCGTAAAGTCAAAGAAGAACATGAAGAAGAGGATGATGATGTTatgaattaa
- Protein Sequence
- MGHSSTIMDIQRVLLHQQSNNQQCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPAGQEATVILPDIRGELLENVLSFIYMGETSLTSVMLPEFLGAINLLGIKSAISFDTNPTSMTTSNVISGAMAVEEAKSISGLHIANTALMEEEEEEDAGAVVGKLEVDNAVLTNPQQQHDHEGRTLEFLDVYGEQPKITYSIEHMGGTTSGNQYIYTENTGTFTITQSSVAKLGVQGSSAVVDSVETAELGDEDVEAEVTDEHEESESQLIEEEYVGSADPLIEESAEADVDMHEDGMHDGDEEEDDELLDVKPRKSHLDMKMLKSKALQRPASSAKATKKTMTKQHQQHAALKKECKEDINDALDLAVAAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPDFVACRRRDSTPKDELREKLAKAVHACINDGMTQNHAANLFEIPKSTLWRHLQRRGNEVQRKVKEEHEEEDDDVMN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00549654;
- 90% Identity
- iTF_00546570;
- 80% Identity
- iTF_00532486;