Dlat016948.1
Basic Information
- Insect
- Drosophila lacteicornis
- Gene Symbol
- DMRT2
- Assembly
- GCA_008044355.1
- Location
- VNKF01007409.1:1600-2124[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-24 5.6e-21 74.2 16.3 1 47 19 65 19 65 0.99 2 3 3.1 1.5e+04 -4.0 0.1 39 45 69 75 68 76 0.76 3 3 2.3 1.1e+04 -3.5 0.1 38 46 142 150 140 151 0.77
Sequence Information
- Coding Sequence
- ATGAGCAAGGACCAGAATCAGAGAGTTATTAGCCCGCGGGAGCGCCGCCTGCTGCGTACGCCCAAGTGCGCCCGGTGCCGCAACCACGGCGTCATCTCCTGCGTCAAGGGCCACAAGCGGCTGTGCCGGTGGCGCGAGTGCTGCTGCCCCAACTGCCAGCTGGTGGTGGACCGCCAGCGGGTTATGGCCGCCCAGGTGGCGCTGCGTCGCCAGCAGACCATGGAGGCCCTGGAGGCCACCACGGGAGCGGGTGCGGGTGCCTCAGGTGCCTCCCACAGCAGCGAGGGCGAGGACTCGCTCACCTCCACATCACCGCCACCAATGCATCCGCCGTCGGGATTTTGCACTGGCTCGAGCAACTCTTCATCCGCATCCGCCTCCGCCACCgcatcatcatcgtcctcgtcctcgtcctcatcaGCGGCCACGCGACAGGCTTTGATGACCCAGAAGAGGATCTACAAGCAGCGGTTGCGCAGCCTGCAGCAGTCCACGCTCCACATCACGGCCGCCATGGAAGGTTAG
- Protein Sequence
- MSKDQNQRVISPRERRLLRTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATTGAGAGASGASHSSEGEDSLTSTSPPPMHPPSGFCTGSSNSSSASASATASSSSSSSSSSAATRQALMTQKRIYKQRLRSLQQSTLHITAAMEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00483001;
- 90% Identity
- -
- 80% Identity
- -