Daur015839.1
Basic Information
- Insect
- Drosophila auraria
- Gene Symbol
- DMRT2
- Assembly
- GCA_008042615.1
- Location
- VNJW01012811.1:53202-53732[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-24 6.5e-21 74.2 16.3 1 47 28 74 28 74 0.99 2 3 3.2 1.7e+04 -4.0 0.1 39 45 78 84 77 85 0.76 3 3 0.49 2.6e+03 -1.4 0.1 38 46 144 152 141 153 0.82
Sequence Information
- Coding Sequence
- ATGAGCAAGGACCAGAACCAAGGCCAGGGATCCGCCGAGTCCTCAGTGAGAGTGATTAGCCCGCGGGAGCGTCGCCTGCTGCGTACGCCCAAGTGCGCCCGGTGCCGCAACCACGGCGTCATCTCCTGCGTCAAGGGCCACAAGCGCCTGTGCCGGTGGCGCGAGTGCTGCTGCCCCAACTGCCAGCTGGTGGTGGACCGTCAGCGGGTTATGGCCGCCCAGGTGGCCCTGCGTCGCCAGCAGACCATGGAGGCCCTGGAGGCCACCGCTACTTCGGGTGCGGCTGCCTCTGGCGCCCACAGCAGCGAGGGCGAGGACTCGCTCACCTCCTCCACATCACCGCCACCAACGCATTCGCCGTCGGGATTTAGCACTGGCACCAGCAACTCtacctcatcctcatcctcagcGTCATCATTGTCATCAGCGGCCACGCGACAGGCCTTGATGGCCCAGAAGAGGATCTACAAGCAGCGGCTGCGCAGCCTGCAGCAGTCCACGCTCCACATCACGGCCGCCATGGAAGGTTAG
- Protein Sequence
- MSKDQNQGQGSAESSVRVISPRERRLLRTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATATSGAAASGAHSSEGEDSLTSSTSPPPTHSPSGFSTGTSNSTSSSSSASSLSSAATRQALMAQKRIYKQRLRSLQQSTLHITAAMEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00531676;
- 90% Identity
- -
- 80% Identity
- -