Basic Information

Insect: Drosophila kurseongensis
Gene Symbol: -
Assembly: GCA_018153305.1
Location: JAECXX010000045.1:470972-474042[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.7e-05 0.0057 17.0 2.7 1 23 202 225 202 225 0.95

2 17 0.00048 0.036 14.5 0.2 1 23 232 254 232 254 0.97

3 17 0.2 15 6.3 0.1 2 23 286 307 285 307 0.94

4 17 7.5e-05 0.0056 17.0 2.2 1 23 394 417 394 417 0.97

5 17 0.23 17 6.1 0.6 1 19 424 442 424 445 0.93

6 17 0.063 4.7 7.8 6.4 1 23 454 476 454 476 0.95

7 17 4.4e-06 0.00033 20.9 0.4 1 23 483 506 483 506 0.97

8 17 0.00036 0.027 14.9 2.4 2 23 514 535 513 535 0.96

9 17 0.017 1.2 9.6 0.1 2 21 562 581 561 582 0.94

10 17 0.0075 0.56 10.7 2.6 1 23 631 654 631 654 0.98

11 17 0.02 1.4 9.4 0.6 1 23 691 714 691 714 0.94

12 17 0.00012 0.0087 16.4 1.6 2 23 747 769 746 769 0.95

13 17 0.0027 0.2 12.1 0.1 1 23 783 805 783 805 0.95

14 17 1.2e-05 0.00089 19.5 0.9 1 23 811 833 811 833 0.99

15 17 3.1e-07 2.3e-05 24.6 2.6 1 23 839 861 839 861 0.98

16 17 3.4e-05 0.0025 18.1 3.8 1 23 867 889 867 889 0.97

17 17 2.4e-05 0.0018 18.6 0.5 1 22 895 916 895 919 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.7e-05	0.0057	17.0	2.7	1	23	202	225	202	225	0.95
2	17	0.00048	0.036	14.5	0.2	1	23	232	254	232	254	0.97
3	17	0.2	15	6.3	0.1	2	23	286	307	285	307	0.94
4	17	7.5e-05	0.0056	17.0	2.2	1	23	394	417	394	417	0.97
5	17	0.23	17	6.1	0.6	1	19	424	442	424	445	0.93
6	17	0.063	4.7	7.8	6.4	1	23	454	476	454	476	0.95
7	17	4.4e-06	0.00033	20.9	0.4	1	23	483	506	483	506	0.97
8	17	0.00036	0.027	14.9	2.4	2	23	514	535	513	535	0.96
9	17	0.017	1.2	9.6	0.1	2	21	562	581	561	582	0.94
10	17	0.0075	0.56	10.7	2.6	1	23	631	654	631	654	0.98
11	17	0.02	1.4	9.4	0.6	1	23	691	714	691	714	0.94
12	17	0.00012	0.0087	16.4	1.6	2	23	747	769	746	769	0.95
13	17	0.0027	0.2	12.1	0.1	1	23	783	805	783	805	0.95
14	17	1.2e-05	0.00089	19.5	0.9	1	23	811	833	811	833	0.99
15	17	3.1e-07	2.3e-05	24.6	2.6	1	23	839	861	839	861	0.98
16	17	3.4e-05	0.0025	18.1	3.8	1	23	867	889	867	889	0.97
17	17	2.4e-05	0.0018	18.6	0.5	1	22	895	916	895	919	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCGGTGATTTGTCGCACCTGCGACTCTACGGACACCGACAACCTTTTGAAGTTGGCCACGCCCTCGAAAAAGTATCCGGACAAGTTGCTCGCGGAAATCCTGTGCGAGCTGACCGAAATTAATATGGATGACACCGGAAACCAGAAACTTCCTCAGTGTTTGTGCAGTGGCTGCACCAAGAAATTGATGGGAGCCTATTGCTATGTGAAGCAAGCGCTGGCCGCCAATGAGTTGCTAATGAAGCACCTGAAAAATGGTGCTGCTCCAACTACCACCGATTGCCTGCAAGAGACGCCGATGGAGCTTTGTGCCGAGCAGCACGTGGAGGTCAAGATAGAGACCGAGGACGAGGACTGTGGTGACAATGATGTCAGCATTACTTGCTCCGAACTGGCGGAACCAGACGATATGGATATAGAGAGCAAGAAGTCCGTGGATCCTCTGACCATGATTGAGACGGTGAAGCTGGAAATGGGACTGCCAAGAATTGCAAAACCAACGGATGATGCTTCGGACTTCGAAGACGAGGACTCCCTGGATAACCTGCCTCTGTATAAGCGCATTCAAAAGTGGAAGATAGGTAGAAAGCCTATATTCAAATGCCAGGACTGCCCGAGAAGTTTCAAGCGAGTCGAGTTCCTTAAAAGACATGAGACCCGCTTCCATAAAGAGGAAACACGCTCATTTGCATGCTCCCTCTGCATTCGCAAGTTTAGTCGCAGCGAAGCCCTTGAGGCGCACCTGAAAGTCCACCGAAACTCCAAGCGATCGGCAAACATAAGCGAGCATAAGAAGGCTAAGGCGGTGGATTTAAATCTCTGCAAGCCGCACGGCTACAAACTAATTGAGTGCATGATCTGCCAGAGCCAGTACAACAAGATTGCCGATCTGCGGCGACATTTAGAGGAGCATCCCGAGATAGTCAGCCCGTGCGGTCGGCCAAATGTGGAGCCACGCGAGCTTTTTTATCCCGACTCCAAGGACCTTGGCGAGGAGCAATTAATCAGCTTGATTCGAAAGGATTTGGCGGCAGGCATTTATCAGCGTTTCTATTCCATTACCAACCAGAGTGGCTACGAAATGGATCTGGACAGTTCCGAGACAGACAGTGATCTGGACGGAGATCCCGAGGATCAACAAAAGAGGCGAAAGAAAAGCCGCAAGAGTAGCTACAGCTGCGAACTATGCCAGCAGAAATTCCCGCGAAAATATCAGTTATATGACCACCAGCGACAGACCCACAGTTGGTCAGAGGCTCCTCATGTCTGCGGGCGGTGTGATGGACGCTTCGTGAGTCTGCAGCTACTGCGGCATCACAATGAGTCGCAGTGCAGAAATGCGCAGAAGCGGTTTCTTTGCCACAAATGTCCGCTCCGCTTTCGATGGAAACACAACCTTAAAACACATTTCCGCGAGCACAGGATTACAAATCAAACCTTTGAGTGTCCCGATTGCAAGCGGGTCTTTGACAAAAAGAAATCGCTTACCGTTCACCTGCTCAGCGTACATGCAGAAGAATCAAAACTAATACCCTGCCAGTGGTGCAGTCGCAAGTTCTACCGACACGACTACCTGGTAAAGCACCTAAAGCGGCACGGCCTTAGGGAGCAAGACATTCCGCTGGCCGAGACTTTGATAGCGGCCACCTCGCGGCCAAACGGAGCGAAGCGCATCACCTGTCGCATGTGCAACCTGCACTTTGAACGTATCGTGGACCTGCGAGCCCACATCCAGCTGGAGTTAAAGCTGTCCCTGTCGCTGCACCAAAGCTACGACTCCCTACACAATTACTCGATTACAAACGAGTCTGGGTTCGAGCTTCAGTTGGAGGATTCGGAGACGGAGGACGAGATGCAGCCGGGCGGTGGAAGTCGTCCCGTTTACATCTGCGAGTTGTGCAGCGTGCAATGCAAGCGGAAATTCGAAATGATCCAGCATCAGCGGACGATGCACCGCTTCGACAAAATGCCACATGAGTGCGACGACTGCATTTTTAAGTGTGTGTCCAAGAGTATCATGGATCATCACCGGCAGGGACAGTGCAGCAGTACAGAAAAAAAGCATCCTTGCAACAAATGCTCCTACAAATTCATGTGGCCCGAGAATCTGGAACAGCACATTCTTCTGCAGCACAACAACTCGTCCACCAGCAATCTTACTGGATTCAAGAGGTCGACTGGAAAGGGTGACCTGGAAAAAGATGCCGCTGAGGACGGTGTCCCGTTGCTGCAGTGCCCACATTGCGATCGCACCTACCAGATGAAGTCGCGCCTGAACAACCACATCCGCGATGTGCATGTTAACGGTGACCGCAAGCGCAAGGAGGCGGTCAAGCGTTTTCTCTGCTCCCTTTGCGGCATGGAGACCCAATCCGCAGCGGCCCTGGTGACCCATATGCGGCGTCACACAGGCGAAAAGCCGTACAAGTGCGATCTGTGCGAGATGGCCTTTCCCCGGCACTCGGAGCTGGCCTCGCACCGAAGAATGCACACCGGCGAGAAGCCATTCCACTGCACAGTCTGCGGCAAGGACTTTGCCCGCTCCGACAAGCTCAAACGACATATGCTCACCCACAGCGGCCTGAAACCGCACAAATGCACCTACTGCGAGAAGAGCTACCGCCAGGCCAAGGATCTGAAACTCCACCTGCAGCAGCACACCGGCGAATGTCCTTTCGTGTGCGGGACCTGCGGCGAGCGTTTCATCCAAAGCAGCACGCTGGAGAAGCACAGGCTGATGCGACGCCACTTCGACGAGGTGGAGGCGTGGTTGAGGCGCCAAAAATAG
Protein Sequence: MKLPVICRTCDSTDTDNLLKLATPSKKYPDKLLAEILCELTEINMDDTGNQKLPQCLCSGCTKKLMGAYCYVKQALAANELLMKHLKNGAAPTTTDCLQETPMELCAEQHVEVKIETEDEDCGDNDVSITCSELAEPDDMDIESKKSVDPLTMIETVKLEMGLPRIAKPTDDASDFEDEDSLDNLPLYKRIQKWKIGRKPIFKCQDCPRSFKRVEFLKRHETRFHKEETRSFACSLCIRKFSRSEALEAHLKVHRNSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHPEIVSPCGRPNVEPRELFYPDSKDLGEEQLISLIRKDLAAGIYQRFYSITNQSGYEMDLDSSETDSDLDGDPEDQQKRRKKSRKSSYSCELCQQKFPRKYQLYDHQRQTHSWSEAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFECPDCKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLREQDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSLHNYSITNESGFELQLEDSETEDEMQPGGGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQGQCSSTEKKHPCNKCSYKFMWPENLEQHILLQHNNSSTSNLTGFKRSTGKGDLEKDAAEDGVPLLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAVKRFLCSLCGMETQSAAALVTHMRRHTGEKPYKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDEVEAWLRRQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00581676;
90% Identity: iTF_00604984;
80% Identity: -