Dkur015800.1
Basic Information
- Insect
- Drosophila kurseongensis
- Gene Symbol
- bab1_1
- Assembly
- GCA_018153305.1
- Location
- JAECXX010000005.1:25583092-25585769[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.3e-18 1.6e-14 53.3 0.0 1 43 55 98 55 100 0.95 2 3 3.3 5.6e+03 -2.9 0.3 6 12 215 221 208 224 0.73 3 3 2.8 4.9e+03 -2.7 0.1 5 11 231 237 230 244 0.59
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCATGCTTGGATGGGCGCCACCGGCTCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGTGAGCGAGGTCCTTTGAAGTCCTGGCGGCCCGAGACCATGGCGGAGGCCATTTTCAGTGTGCTGAAGGAGGGCTTGTCCCTGTCGCAGGCTGCCCGCAAATATGACATCCCGTATCCCACATTCGTGCTCTATGCGAATCGGGTGCACAACATGCTGGGGCCCTCCATCGACGGTGGGCCGGATCTGCGGCCCAAGGGGCGTGGCAGGCCGCAGAGGATTCTCCTGGGCATCTGGCCCGACGAGCACATCAAGGGTGTCATCAAGACGGTGGTTTTCCGCGACACCAAGGACATTAAGGACGATAGCCTGGCCGCTCATATGCCGCCCTACGGTCGACATTCGCCCGCGTTTCCCTTGCAGGACCTCCCGCTGAGCTATCCCGGCGCAAGTGGCGCCCTGGCAGGCACGCCCAGCTCCCTGGCCTGTCCGAACGGGAGCGGTCCGCAGGCGGGCGTAGGAGTGGGCGTGGGCGTGGGCGGTGAGCAGCACATGTCGCAGGAAACTGCCGCTGCGGTGGCCGCCGTGGCCCACAACATCCGGCAGCAGATGCAGATGGCAGCGGCCGTGCAGCATCAAGGATCTCAGCATCAGGCCGTTCCGCCGGGCCTATTCAACCTGCCCCCCCATCCCGGTGTGGGGGTGCCGGGAGCGGGCGGAGGCAGGGCCAGCATATCGCCGGCCTTGAGCAGCGGCTCCGGCCCAAGGCACGCCCCATCGCCCTGCGGTCCCCTTGTACCGAATCTGCCGCCCAGCATGGCCATCGCCTTGCACCACCAACAGCATCAGCACGGGGAAAGAAGACCTTGTGGCTGTCCTTTTGGTCCTTGGCCATGCCCCCACCATCATCATCAACAGCAGCAGCAGCACCACCATCAGGTGGGCGGTGGCCTGCCCCACAAGTCCGGTTTCGGTGCCAGTTCCAGTTCCTCCGCCTCCACCTCGATGGGCCAACATGCGCCCAAGGCCAAAGGCAGTCCGCTGCGCAGCGAAACTCCGCGGCTCCACTCGCCACTGGGCGACCTTGGCCTGGACATGGCCGGCTACAAGCGGGAATTCTCGCCCAGTCGCCTCTTCGCCGAGGATCTGGCTGAACTGGTGGGCGCCAGTGTCTCATCCTCCTCGTCTTCAGCGGCTGCGGCAACAGCTCCGCCGGAGAGATCGGGGGGAGGGGCGTCGGCAGCAGCGGGAACAGATGCGCCCAGTTCCTCAAGCAGCGGTGGCATCAAGGTGGAACCCATAACCACCACCAGCGAGTAA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDSLAAHMPPYGRHSPAFPLQDLPLSYPGASGALAGTPSSLACPNGSGPQAGVGVGVGVGGEQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQGSQHQAVPPGLFNLPPHPGVGVPGAGGGRASISPALSSGSGPRHAPSPCGPLVPNLPPSMAIALHHQQHQHGERRPCGCPFGPWPCPHHHHQQQQQHHHQVGGGLPHKSGFGASSSSSASTSMGQHAPKAKGSPLRSETPRLHSPLGDLGLDMAGYKREFSPSRLFAEDLAELVGASVSSSSSSAAAATAPPERSGGGASAAAGTDAPSSSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00547989;
- 90% Identity
- iTF_00515521; iTF_00511931; iTF_00494311; iTF_00588062;
- 80% Identity
- -