Dgun014815.1
Basic Information
- Insect
- Drosophila gunungcola
- Gene Symbol
- bab1
- Assembly
- GCA_011057485.1
- Location
- WTSR01005218.1:4619481-4622550[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.9e-18 1.5e-14 53.3 0.0 1 43 55 98 55 100 0.95 2 3 3.1 5.2e+03 -2.8 0.3 6 12 213 219 206 222 0.73 3 3 5.2 8.5e+03 -3.5 0.1 4 11 228 235 228 235 0.84
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCATGCCTGGATGGGTGCCACTGGGTCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGGGAACGGGGTCCGCTGAAGTCCTGGCGTCCCGAGACCATGGCCGAGGCCATATTCAGTGTGCTGAAGGAGGGCTTATCCCTGTCGCAGGCTGCCCGCAAATACGACATCCCGTATCCCACGTTCGTGCTGTATGCCAATCGGGTGCACAACATGCTGGGACCCTCCATCGACGGTGGGCCCGATCTGCGGCccaaggggcgtggcaggccgCAGAGGATTCTGCTGGGCATCTGGCCGGATGAGCACATCAAGGGCGTCATCAAGACGGTGGTTTTCCGCGACACGAAGGACATTAAGGACGACAGCCTGGCCGCTCACATGCCGCCCTACGGTCGACATTCGCCCGCGTTTCCCTTGCAGGACCTGCCGCTGAGCTATCCCGGCGCAAGTGGCGCCCTGGCAGGAGCGCCCAGTTCCCTGGCCTGTCCAAATGGCAGCGGTCCGCAGGcgggagtgggcgtgggcgtgggcggtgAGCAGCACATGTCGCAGGAAACGGCCGCTGCGGTGGCCGCCGTGGCCCACAACATCCGGCAGCAGATGCAGATGGCAGCGGCCGTCCAGCATCAAGGATCTCAGCATCAGCCGGTGCCGCCGGGCCTGTTTAACCTGCCGCCCCATCCGGGCGTGGGCGGTGGCGTAGGCGTGCCGGGGGCGGGCGGAGGCAGGGCCAGCATATCGCCGGCCTTGAGCAGCGGCTCCGGGCCCAGGCACGCCCCGTCGCCCTGCGGTCCCCTCGTCCCGAATCTGCCGCCCAGCATGGCCATCGCCTTGcaccaccaacagcagcagcatcagcacgGGcagcagcttcacCACCAGGTGGGCGGTGGCCTGCCGCACAAGTCCGGTTTCGGTGCCAGTTCCAgttcctccgcctcctccgcaATGGGTCAGCACCCGCCCAAGGCCAAAGGCAGTCCGCTGCGCAGCGAAACACCCCGACTGCATTCACCGCTGGGCGATCTTGGCCTGGACATGGCCGGCTACAAGCGGGANNTCTCGNCCAGTCGCCTCTTCGCCNAGGATCTGGCCGAGCTGGTGGGCGCCAGTGTCtcatcctcctcgtcctcggcgGCAGNNNNNNCGGCATCGGCTCCGCCAGAGAGATCGGTAGGAGGTGGGTCAGCGGCGGCGGGAACAGATGCGCCCAGCTCCTCGAGTGGCGGTGGCATCAAGGTGGAACCCATTACCACCACTAGCGAGTAA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDSLAAHMPPYGRHSPAFPLQDLPLSYPGASGALAGAPSSLACPNGSGPQAGVGVGVGGEQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQGSQHQPVPPGLFNLPPHPGVGGGVGVPGAGGGRASISPALSSGSGPRHAPSPCGPLVPNLPPSMAIALHHQQQQHQHGQQLHHQVGGGLPHKSGFGASSSSSASSAMGQHPPKAKGSPLRSETPRLHSPLGDLGLDMAGYKRXXSXSRLFAXDLAELVGASVSSSSSSAAXXXASAPPERSVGGGSAAAGTDAPSSSSGGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00547989;
- 90% Identity
- iTF_00529490;
- 80% Identity
- -