Dkan009427.1
Basic Information
- Insect
- Drosophila kanapiae
- Gene Symbol
- dmd-4
- Assembly
- GCA_008042475.1
- Location
- VNJM01003026.1:1459030-1462178[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-25 5e-22 77.5 9.3 1 47 39 85 39 85 0.98 2 2 0.41 1.9e+03 -1.1 0.2 23 31 306 314 298 318 0.78
Sequence Information
- Coding Sequence
- ATGGCCAGTGTCAGTGCTGAATCTGTTGGTGAAGTGGCAGCCAAGCGTCCTCGCCTGGCTGGGAGCTCAAAGGGTTCCAAAATAGTTGAGCTACAGCCGGCCAAGGTCGTGAATCGGGTGCCCAAGTGCGCCCGGTGCCGCAATCACGGGATTATCTCGGAGCTAAGAGGCCACAAGAAGCTATGCACCTACAAGAACTGCAAGTGCGCCAAGTGCGTCCTGATCTTCGAGAGGCAGCGCATCATGGCCGCCCAGGTTGCCCTGAAGCGCCAGCAGGCCGTGGAGGATGCGATTGCCATGCGGCTGGTGGCCAACAAGACGGGTCGTTCCATTGACGCCCTGCCGCCGGGCAACATATTCGGCCTGACCGTGACCCAGCCAAGCTCGCCCCGTCATCAGAAGGAGGAGAATGAGCTGGCGGAGAAGCCTCTGGCTTCTGaagagaagcagcagcggccgcaggaggaggagtacaGCGAACCGCCGGCGGTCGCTCAGGACCTGAGCGCACCCCGACGGGAGAACGTGTCCCAAACAGCCATTGATATGCTGGCTCAGCTCTTTCCACAGCGCAAGCGATCTGTCCTGGAACTGGTCCTTAAGCGCTGCGATCTGGACTTGATTCGGGCCATCGAGAATGTGTCGCCAGCGGGAAGCACCACACCGGTGGATGTCACTACAAATCCGCTGCCGAATCAGGATATAACTCAGCCCAGTCTGCCGCTGGCCACACACTCAAGGAGCAGCGCCTTCAGGCCGGTTATTGCGGATCAGAGCAAATCCATGCTGGAGCTAAAGCCACCGGTTTTTGGGAGCAACCCTTCGGCAGCGGCCGCCGCCATCTGTGCCTACCCGAAGTGGTTTGTGCCGCTCTCCTTTCCGGTCACCATGGGCCACCTGTCCAACCTGGCGCCTCGCTGCACCTTGCCCAACTGCGCCTGCCTGGACAGCTACCAGTTCCACTAG
- Protein Sequence
- MASVSAESVGEVAAKRPRLAGSSKGSKIVELQPAKVVNRVPKCARCRNHGIISELRGHKKLCTYKNCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIAMRLVANKTGRSIDALPPGNIFGLTVTQPSSPRHQKEENELAEKPLASEEKQQRPQEEEYSEPPAVAQDLSAPRRENVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPAGSTTPVDVTTNPLPNQDITQPSLPLATHSRSSAFRPVIADQSKSMLELKPPVFGSNPSAAAAAICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCACLDSYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00606331;
- 90% Identity
- iTF_00478033;
- 80% Identity
- -