Dano001636.1
Basic Information
- Insect
- Drosophila anomelani
- Gene Symbol
- dmd-4
- Assembly
- GCA_035045905.1
- Location
- JAWNOO010000007.1:12442277-12444520[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-26 4.3e-22 78.0 8.8 1 47 39 85 39 85 0.98 2 2 0.51 2.2e+03 -1.1 0.2 23 31 304 312 296 316 0.78
Sequence Information
- Coding Sequence
- ATGGCCAGTGCCAGTCCTGAATCTGCTGGTGAAGTGCCAGCCAAGCGTCCTCGCCTGTCTGGGAGTTCCAAAGTTCCCAAAATAGTTGAGCCTCAGCCGGCCAAGGTCGTGAATCGGGTGCCCAAGTGCGCCCGGTGTCGCAATCACGGGATTATCTCAGAGCTAAGGGGCCACAAGAAGCTCTGCACCTACAAGAACTGCAAGTGCCCCAAATGTGTCCTGATCTTCGAGAGGCAGCGCATCATGGCCGCTCAGGTCGCCCTGAAGCGTCAGCAGGCCGTGGAGGATGCGATAGCCATGCGGCTGGTGGCCAACAAGACGGGTCGTTCCATTGATGCCCTGCCGCCGGGCAATATCTTTGGTCTGACCGTGACACAGCCCAGCTCGCCACGCCCgcaaaaggaggaggagcaagcagagAAGACTCTTTCCGAGAAGCAGCAACCGCAGGAAGAGGAGTACAGCGAACCGCCGGCGGTTGCCCAGGATCTAAGTGCACCCCGACGGGAGAACGTTTCCCAGACGGCCATCGATATGCTGGCCCAGCTTTTTCCTCAACGCAAGCGATCTGTCCTGGAACTGGTTCTCAAGCGTTGCGATCTGGACTTGATACGAGCCATCGAGAATGTCTCGCCAGCGGGCAGAGCCACACCGGTGGATGTCATCACCAACACGCAGCAGAATCAGGACATAACTCAGCCCAGTTTGCCACTCGCCACGCCCTCAAGGAGTAGCGCCTTCAGGCCAGTTATAGCAGATCAGTTCCAGAACAAATCGATGGTGGAGCTAAAGCCACCGGCCTTTGGCAGCAATCCttcggcagcggcggccgccATCTGTGCCTACCCGAAGTGGTTCGTTCCGCTCTCATTTCCGGTCACTATGGGTCACCTCTCCAACCTGGCGCCGCGCTGCACCTTGCCCAACTGCGCCTGCCTGGACAGCTACCAGTTCCACTAG
- Protein Sequence
- MASASPESAGEVPAKRPRLSGSSKVPKIVEPQPAKVVNRVPKCARCRNHGIISELRGHKKLCTYKNCKCPKCVLIFERQRIMAAQVALKRQQAVEDAIAMRLVANKTGRSIDALPPGNIFGLTVTQPSSPRPQKEEEQAEKTLSEKQQPQEEEYSEPPAVAQDLSAPRRENVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPAGRATPVDVITNTQQNQDITQPSLPLATPSRSSAFRPVIADQFQNKSMVELKPPAFGSNPSAAAAAICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCACLDSYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00606331;
- 90% Identity
- iTF_00541091; iTF_00617667; iTF_00488681; iTF_00561777; iTF_00612831; iTF_00485157; iTF_00594566; iTF_00491530; iTF_00489390; iTF_00524431; iTF_00527322; iTF_00593852; iTF_00569702; iTF_00482999; iTF_00609185; iTF_00533116; iTF_00525895; iTF_00571915; iTF_00590255; iTF_00480184; iTF_00531674; iTF_00606331; iTF_00490098; iTF_00492248; iTF_00492249;
- 80% Identity
- -