Basic Information

Gene Symbol
snpc-4
Assembly
GCA_018903935.1
Location
JAEIFP010001951.1:709941-712406[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 5.6e-12 6.1e-09 35.9 0.0 1 39 228 267 228 274 0.92
2 4 9.8e-09 1.1e-05 25.5 0.1 3 44 295 340 294 342 0.88
3 4 2.5e-06 0.0026 17.8 0.0 2 46 349 394 348 394 0.88
4 4 4.5e-08 4.8e-05 23.4 0.0 3 43 402 443 400 446 0.95

Sequence Information

Coding Sequence
ATGTGCAATGTGGATAATCTGAAATGGAATCAGAACCAGTTGCTGCTAGAAATCACCTCTCTGTTACAGACCACATCCCATCCCAGCGATGCCAATGCCCTCGTGTTGAACCAAGAGATGCAACGTCGCCTGGAGCAGGTGAAGGCCAAGATTCACATCCTGCTGAAGTCTGTCAGAGCTCGATATGCTCGTAATGAGGAGATTCTGGTGCGACGTCTTAAGCCACGCTCCAGACAGGATGAAGCCATTTGCCAATCTGGAGCTATACTGCGAGGCGGGACCTTTCGTTTTAAAGGAAACCTCTACTTCCGCGATGTCGATGGACGCAGTTGTCCCAACAATGAGGATTACGAACGTCGCTGTGCCGACGAAATGTTTCCCACCGACTTCGACATGCGTTCCAAGCATGTGTGGACTATCTTGGATAAGAAGAATGTTGTAATGGGTGTCAAGCAGCAGTTGTTGGACTACACTATATATAAGAATCAGTTAAAGTCACAGAATGTTTTAAAACGCAAAGCAGTGGATCAACACACCAAATCGCTGGTCAGCCTGATGGCTGCTGTGGATGGGAATTTCAGTATTGATTGGAATCAAATCAGCACGATAGATGTGGCATATCGTCATTCATCCTACAGCTGCGAGGCTATGTGGCGAGTCTATTTGGATCCGAAAATTCGCCGCGATGATTGGACTGAGGAGGAAGATGAAGCCTTGGCAGAGGCAGCTAAATCGTATCAAATGCAGAATTGGCAAGCAATCGCCTTAGCTCTAGATGGCCGTTCAGATTATCAATGTTTTGTACGTGTCCAGACCACATTGCGAACCTCTGTGATTGCAGCTGCATCATCATCGTCACCCAACTTGTCGAGTGGTGTCGTTAAATGGTCCGAAGAGGAAAACGAAAGACTAATAAGGATGGTGGAGAAAAATACTATGAATGGCCAGGTTAATTGGCAAAGAGTGGTAGAACATTTTCCTGGTAAATCCAAATCGACAATTATCGGAAGGTATACCTATGTTCTCCATCCCAGCATAAGCCATGACCCCTTCAGCTCAAGAGAGGACATGATGTTATTTGCTGCCGTCGAGGAGTATGGCGGTAAATTCCATTGCTTTCCCCGATCCCTGTTCCCGAATCGGTCTTTGGCCCAATTACGGACACGTTATCACAATGTATTGGCTCAGCGCGACAAAACCGACGCCTGGTCCGAATTAGATGATACCAAATTGATGGAGTTTGTTACAGAGCACGGCGCCGCCCAGTGGGTGAATTGTGCCGCGTTTTTGGCTAACCATACCAGAACCAGTTGTCGTACTCGCTATTTGGTGATTAAACGCTTTCTAGAGAGGAATCCATCGGCCACAGTGCAGGATTTTCCAAGGCGCAAGAAAACTAAGAACAGCCAGGTTACCTCTGAGAATTGGGCTCAACGTTTGCAGGAATGGCATGATAATCCTGATTCCATGGCAGCCGCCGAAACCAAACCGCCAAAACCTAAGAAAACTCGAAGAAAGAAGCCTAAAGTGGATGATCCCATTAATAATAGCTATATGAGATCACTAAAGGGAATGGATTTACGGATTTATAATTATTTTAAATATAGCTACAATTTGAAATTGAATGAACCTAATCGGCCTATATCTCTGCCAAGAGATGCAACGAATCTCGAGAGAGTGGCCAAATGTTTGGCCTATAAACAACCTGCAGCAAATCTATTTAAGCCAATACAATCGCCTACATTGCCCAAAAGCTTGAGTCAGTGTTACAACACAATGTTTTTTAAATTAAATACAAACCACACTGAAGCCTCTACATCCAAATCATCATCATTATTGCCTCCCAGCTGGTGCACAATGATGGGTTTTCGTGCCATGTGCATTTTGTCAGGCCATTGTCGGAGCCAGTTGTCGGTTGACACATCTACGTTCGTCTATGATGAATCCTCGCCAGCAGTTCAACTATTTCGGCAACGTTTGCGGTCATTATTTTATCAAACAACATTACTGAGCCGCCTGGAGGTGGAAATATTTAAGGATCTACCAGCTGCATTAGTAGCCAGCCAACGTCCGCCAGTCAACACCGTATTGCCGGTGGTTGAAGAGTTACCCAAGGAGGAAAACCCACAAAAACAACGACAACAGCAATGTCCAATTGCCAAGAAGACTTTATCCCAAGAGGATGTACAGAAGCGGGCTAGCAATCAAATGAAAGAAATTGAGCGCCTGATAGAGAAGCAAAAGAAATGCAAATCGGAACCCATGAGTGAAGATGAAATTAGTTTAAAGCAAGAATTTCTCTCCGAAGATGATGGAGAGTCATCAGAGATTACATAA
Protein Sequence
MCNVDNLKWNQNQLLLEITSLLQTTSHPSDANALVLNQEMQRRLEQVKAKIHILLKSVRARYARNEEILVRRLKPRSRQDEAICQSGAILRGGTFRFKGNLYFRDVDGRSCPNNEDYERRCADEMFPTDFDMRSKHVWTILDKKNVVMGVKQQLLDYTIYKNQLKSQNVLKRKAVDQHTKSLVSLMAAVDGNFSIDWNQISTIDVAYRHSSYSCEAMWRVYLDPKIRRDDWTEEEDEALAEAAKSYQMQNWQAIALALDGRSDYQCFVRVQTTLRTSVIAAASSSSPNLSSGVVKWSEEENERLIRMVEKNTMNGQVNWQRVVEHFPGKSKSTIIGRYTYVLHPSISHDPFSSREDMMLFAAVEEYGGKFHCFPRSLFPNRSLAQLRTRYHNVLAQRDKTDAWSELDDTKLMEFVTEHGAAQWVNCAAFLANHTRTSCRTRYLVIKRFLERNPSATVQDFPRRKKTKNSQVTSENWAQRLQEWHDNPDSMAAAETKPPKPKKTRRKKPKVDDPINNSYMRSLKGMDLRIYNYFKYSYNLKLNEPNRPISLPRDATNLERVAKCLAYKQPAANLFKPIQSPTLPKSLSQCYNTMFFKLNTNHTEASTSKSSSLLPPSWCTMMGFRAMCILSGHCRSQLSVDTSTFVYDESSPAVQLFRQRLRSLFYQTTLLSRLEVEIFKDLPAALVASQRPPVNTVLPVVEELPKEENPQKQRQQQCPIAKKTLSQEDVQKRASNQMKEIERLIEKQKKCKSEPMSEDEISLKQEFLSEDDGESSEIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2