Basic Information

Gene Symbol
snpc-4
Assembly
GCA_018150345.1
Location
JAECWI010000504.1:1419277-1421743[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 9.1e-13 1e-09 38.4 0.0 1 39 228 267 228 274 0.92
2 4 1.6e-08 1.8e-05 24.8 0.1 3 44 297 342 296 344 0.88
3 4 2.5e-06 0.0028 17.8 0.0 2 46 351 396 350 396 0.88
4 4 2e-09 2.2e-06 27.8 0.0 3 43 404 445 402 448 0.95

Sequence Information

Coding Sequence
ATGTTCAATGTAGATACTCTGAAATGGAATCAGAACCAGTTGCTGCTAGAAATCACATCCCTGTTACAGACCACATCCCAGCCCAGCGATGCCAATGCCCTTTTGTTGAACCAAGAGATGCAACGTCGCCTGGAGCAGGTGAAGGCCAAGATTCACATCCTGCTGAAGTCGGTGAGAGCTCGATACGCCCGTAATGAGGAGATTCTGGTGCGACGTCTTAAGCCACGCTCCAGACAGGATGAAGCTATCTGCCAATCTGGAGCTATACTGCGAGGCGGAACCTTTCGCTTTAAGGGAAACCTCTATTTCCGCGATGTCGATGGACGCAGTTGTCCCAACAATGAGGATTATGAACGTCGCTGTGCCGACGAAATGTTTCCCACCGACTTCGACATGCGCTCGAAGCATGTGTGGACTATCTTGGACAAGAAGAATGTTGTAATGGGGGTTAAGCAGCAGTTGTTGGATTATACTATATATAAAAATCAGTTAAAGACACAGAATGTTTTAAAGCGCAAAGCAGTGGATCAACACACCAAATCGCTGGTCAGCCTGATGGCTGCTGTGGACGGGAATTTCAGTATTGATTGGAATCAAATCAGCACCATAGATGTGGCATATCGTCATTCATCCTACAGCTGCGAGGCTATGTGGCGAGTCTATTTGGATCCCAAAATTCGCCGTGATGATTGGACAGAAGAGGAAGACGAAGCCTTGGCAGAGGCAGCTAAATCGCATCAAATGCAGAATTGGCGGGCAATCGCCGCATCTCTAGATGGCCGTTCAGATTATCAATGTTTTGTCCGTGTTCAAACCACTTTGCGAAGCTCTGTGATTGCTGCTGCATCTTCATCATCATCGTCACCCAACTTGTCCAGTGGCGTCGTAAAATGGTCCGAAGAGGAAAATGAAAGACTAATAAGTATGGTGGAGAAGAATACTATGAACGGCCAAGTTAATTGGCAACGGGTGGTAGAACATTTTCCTGGTAAATCCAAATCGACAATCATCGGAAGGTATACCTATGTTCTCCATCCGAGCATAAGCCATGACCCCTTCAGCTCAAGGGAGGACATGATGTTATTTGCTGCCGTGGAGGAGTACGGGGGTAAATTCCATTGCTTTCCCCGATCCCTGTTCCCGAATCGCTCTTTGGCCCAATTACGGACACGTTATCACAATGTATTGGCTCAACGTGACAAAACCGACGCGTGGTCCGAACTAGATGATACTAAGTTGATGGAGTTTGTTACAGAGCACGGCGCCACGCAGTGGGTGAATTGTGCCGCGTTTCTGGGTAACCACACCAGAACCAGTTGTCGTACTCGCTATTTGGTCATCAAGCGCTTTTTAGAGAGGAATCCATCGGCAACAGTGCACGATTTTCCAAGGCGCAAGAAAACTAAGAACAGTCAGGTCACCTCTGAAAATTGGGCTCAACGTTTGCAGGAATGGCATGATAATCCTGATTCTCTGGCAGCTGCCGAAACCAAACCACCAAAGCCTAAGAGATCCAGAAGAAAGAAGCCTAAAGTGGATGATCCTATTAATAATAGCTATATGAGATCACTGAAGGGATTGGATTTACGGATTTATAATTATTTTAAATATAGCTACAATTTGAAATTGAATGAACCAAATCGGCCTATATGTCTGCCAAGAGATGCCACGAATCTCGAGAGAGTGGCTAAATCTTTGGCCTATAAACAACCTGCAGCGAATCTATTTAAGCCAATACAATCGCCGACATTGCCCAAAAGCTTAAGTCAGTGTTATAACACAATGTTCTTTAAATTAAATACCAACCAAAGTGAAGCCTCTACATCCGAGTCATCATTGTTATTGCCTCCCAGCTGGTCCACAATGATGGGTTTTCGTGCCATGTGCATTTTGTCGGGCCATTGTCGTAGCCAGTCGTCGGTTGACACCTCTACATTCGTGTATGACGAATCATCGCCAGCAGTTCAACTATTCCGGCAACGTTTGCGGGCCTTGTTTTATCAAACAACGTTGCTCAGCCGTTTGGAGGTGGAAATATTTAAGGATCTACCAGCAGCATTGGTAGCCAGTCCACGTCCGCCAGTCAACTCTGTATCGCCGGTGATTGAAGAATTACCCAAGGAGAAAAAGCCACAACAAAAACAACAGGAATGTCCAATTGCCAAGAAGATTTTATCCCAAGAGGATGTAAAGAAGCGGGCGAGCAATCAAATGAAAGAAATTGAGCGCCTGATAGAGAAGCAAAAGAAATGCAAAACGGAACCCATGAGTGAAGATGAACTTAGTTTAAAACAAGAATTTCTGTCCGAAGATGATGGAGAGACAGAGATCACATAA
Protein Sequence
MFNVDTLKWNQNQLLLEITSLLQTTSQPSDANALLLNQEMQRRLEQVKAKIHILLKSVRARYARNEEILVRRLKPRSRQDEAICQSGAILRGGTFRFKGNLYFRDVDGRSCPNNEDYERRCADEMFPTDFDMRSKHVWTILDKKNVVMGVKQQLLDYTIYKNQLKTQNVLKRKAVDQHTKSLVSLMAAVDGNFSIDWNQISTIDVAYRHSSYSCEAMWRVYLDPKIRRDDWTEEEDEALAEAAKSHQMQNWRAIAASLDGRSDYQCFVRVQTTLRSSVIAAASSSSSSPNLSSGVVKWSEEENERLISMVEKNTMNGQVNWQRVVEHFPGKSKSTIIGRYTYVLHPSISHDPFSSREDMMLFAAVEEYGGKFHCFPRSLFPNRSLAQLRTRYHNVLAQRDKTDAWSELDDTKLMEFVTEHGATQWVNCAAFLGNHTRTSCRTRYLVIKRFLERNPSATVHDFPRRKKTKNSQVTSENWAQRLQEWHDNPDSLAAAETKPPKPKRSRRKKPKVDDPINNSYMRSLKGLDLRIYNYFKYSYNLKLNEPNRPICLPRDATNLERVAKSLAYKQPAANLFKPIQSPTLPKSLSQCYNTMFFKLNTNQSEASTSESSLLLPPSWSTMMGFRAMCILSGHCRSQSSVDTSTFVYDESSPAVQLFRQRLRALFYQTTLLSRLEVEIFKDLPAALVASPRPPVNSVSPVIEELPKEKKPQQKQQECPIAKKILSQEDVKKRASNQMKEIERLIEKQKKCKTEPMSEDELSLKQEFLSEDDGETEIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00523621;
90% Identity
iTF_00523621;
80% Identity
-