Basic Information

Gene Symbol
snpc-4
Assembly
GCA_018902025.1
Location
CM032166.1:4390214-4392672[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 8 9.9e+03 -3.1 0.1 23 46 197 222 196 222 0.61
2 5 1.6e-12 2e-09 37.6 0.0 1 39 228 267 228 274 0.92
3 5 6e-09 7.4e-06 26.1 0.1 3 44 296 341 294 343 0.87
4 5 2.3e-06 0.0029 17.8 0.0 2 46 350 395 349 395 0.88
5 5 2e-09 2.4e-06 27.7 0.0 3 43 403 444 401 447 0.95

Sequence Information

Coding Sequence
ATGTGCAATGTGGATGCTCTGAAATGGAATCAGAACCAGTTGCTGCTAGAAATCACTTCCCTGTTACAGACCACATCCCAACCCAGCGATGCCAATGCCCTCGTGTTGAACCAAGAGATGCAACGTCGCCTGGAGCAGGTGAAGGCCAAGATTCACATCCTTCTGAAGTCGGTGAGAGCACGATATGCCCGTAATGAGGAGATTCTGGTGCGACGTCTTAAGCCACGCTCCAGACAGGATGAAGCTATCTGCCAATCTGGAGCTATACTGCGAGGCGGAACCTTTCGCTTTAAAGGAAACCTCTATTTCCGCGATGTCGATGGACGCAGTTGTCCCAACAATGAGGATTACGAACGTCGCTGTGCCGACGAAATGTTTCCCACCGACTTCGACATGCGTTCCAAGCATGTGTGGACTATCTTGGACAAGAAGAATGTGGTAATGGGGGTCAAGCAGCAGTTGTTGGATTATACTATATATAAGAATCAGTTAAAGATACAGAATGTTTTAAAGCGCAAAGCAGTGGATCAACACACAAAATCGCTGGTCAGCCTGATGGCTGCTGTGGATGGGAACTTTAGTATTGATTGGAATCAAATCAGCACCATAGATGTGGCATATCGCCATTCATCCTACAGCTGCGAGGCTATGTGGCAGGTCTATTTGGATCCTAAAATTCGCCGCGATGATTGGACAGAAGAGGAAGACGAAGCCCTGGCAGAAGCAGCTAAATCGTATCAAATGCAGAATTGGCAAGCCATCGCCTCATCTCTAGATGGCCGTTCAGATTATCAATGTTTTGTACGTGTCCAGACCACTTTGCGAAGCTCTGTGATTGCTGCATCGTCATCATCATCGTCGCCCAACTTGTCGAGTGGCGGCGTAAAATGGTCCGAAGAGGAAAATGAGAAACTAATAAGTATGGTGGAGAAGAATACTATGAATGGTCAGGTTAATTGGCAACGGGTGGTAGAACATTTTCCTGGTAAATCCAAGTCGACAATCATCGGAAGATATACCTATGTTCTCCATCCGAGCATAAGCCATGACCCCTTCAGCTCCAGAGAAGACATGATGTTATTTGCTGCCGTCGAGGAGTACGGCGGTAAATTCCATTGCTTTCCCCGATCCCTATTCCCGAATCGGTCTTTGGCCCAATTACGGACACGTTATCACAATGTTTTGGCTCAACGTGACAAAACCGACGCCTGGTCCGAATTAGATGATACTAAGTTAATGCAGTTTGTTACAGAGCACGGCGCCACGCAGTGGGTGAATTGTGCCGCGTTTCTGGGTAACCACACCAGAACTAGTTGTCGTACTCGCTATTTGGTGATTAAGCGCTTTCTAGAGAGGAATCCTTCAGCAACAGTGCAGGATTTTCCAAGGCGCAAGAAAACTAAAAACAGTCAGGTTACTTCTGAGAATTGGGCTCAACGTTTGCAAGAATGGCATGATAATCCTGATTCCCTGGCAGCCGCCGAAACCAAACCACCAAAGCCCAAGAGAACCAGACGAAAGAAGCCTAAAGTGGATGATCCTATTAATAATAGCTATATGAGATCACTAAAGGGAATGGATTTACAGATTTATAATTATTTTAAATATAGCTACAATTTGAAATTGAACGAACCAAATAGGCCTATATCTCTGCCAAGAGATGCAACGAATCTCGAGAGAGTGGTTAAATCTTTGGCCTATAAACAACCTGCAGCGAATCTATTTAAGCCAATACAATCGCCGACATTGCCCAAAAGCTTGAGTCAGTGTTATAACACAATGTTCTTTAAATTAGATACAAACCACAATGAAGCCTCTCCATCCGAGTCATCATTGTTATTGCCTCCTAGCTGGTCCACAATGATGGGTTTTCGTGCCATGTGCATTTTATCGGGCCATTGTCGTAGCCAGTCGTCGGTTGACACCTCTACATTCGTGTATGACGAATCCTCGCCAGCAGTTCAACTATTTCGGCAACGTTTGCGGTCCTTGTTTTATCGAACAACCTTGCTCAGCCGCCTGGAGGTGGAAATATTTAAGGATCTACCAGGAGCATTGGTAGCCAGTCCACGTCCGCCAGTAAACACTGTATCGCCGGTGATTGAAGAGTTACCCAAGGAGAAAAAGACACAACAAAAACAACAGGAACGTCCAAATGCCAGGAAGATTTTATCCCAAGATGATGTAAAGAAGCGGGCTAGCAATCAAATGAAACAAATTGAGCGCTTGATAGAGAAGCAAAAGAAATGCAAAACGGAACCCATGAGTGAAGACGAAATTAGTTTAAAGCAAGAATTTCTGTCCGAAGATGATGGAGAAGCAGAGATTACATAA
Protein Sequence
MCNVDALKWNQNQLLLEITSLLQTTSQPSDANALVLNQEMQRRLEQVKAKIHILLKSVRARYARNEEILVRRLKPRSRQDEAICQSGAILRGGTFRFKGNLYFRDVDGRSCPNNEDYERRCADEMFPTDFDMRSKHVWTILDKKNVVMGVKQQLLDYTIYKNQLKIQNVLKRKAVDQHTKSLVSLMAAVDGNFSIDWNQISTIDVAYRHSSYSCEAMWQVYLDPKIRRDDWTEEEDEALAEAAKSYQMQNWQAIASSLDGRSDYQCFVRVQTTLRSSVIAASSSSSSPNLSSGGVKWSEEENEKLISMVEKNTMNGQVNWQRVVEHFPGKSKSTIIGRYTYVLHPSISHDPFSSREDMMLFAAVEEYGGKFHCFPRSLFPNRSLAQLRTRYHNVLAQRDKTDAWSELDDTKLMQFVTEHGATQWVNCAAFLGNHTRTSCRTRYLVIKRFLERNPSATVQDFPRRKKTKNSQVTSENWAQRLQEWHDNPDSLAAAETKPPKPKRTRRKKPKVDDPINNSYMRSLKGMDLQIYNYFKYSYNLKLNEPNRPISLPRDATNLERVVKSLAYKQPAANLFKPIQSPTLPKSLSQCYNTMFFKLDTNHNEASPSESSLLLPPSWSTMMGFRAMCILSGHCRSQSSVDTSTFVYDESSPAVQLFRQRLRSLFYRTTLLSRLEVEIFKDLPGALVASPRPPVNTVSPVIEELPKEKKTQQKQQERPNARKILSQDDVKKRASNQMKQIERLIEKQKKCKTEPMSEDEISLKQEFLSEDDGEAEIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00523621;
90% Identity
iTF_00523621;
80% Identity
-