Basic Information

Insect: Drosophila innubila
Gene Symbol: -
Assembly: GCA_004354385.1
Location: NW:6169699-6175376[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0006 0.034 14.2 0.3 1 23 131 153 131 153 0.98

2 14 0.00012 0.007 16.3 1.3 1 23 378 400 378 400 0.98

3 14 8.8 5e+02 1.1 0.3 1 23 406 429 406 429 0.87

4 14 5.2 2.9e+02 1.8 1.7 1 23 455 478 455 478 0.90

5 14 0.0011 0.062 13.4 1.9 3 23 768 788 767 788 0.92

6 14 0.044 2.5 8.3 1.4 1 23 794 817 794 817 0.98

7 14 0.3 17 5.7 1.5 2 23 855 876 854 877 0.92

8 14 0.0039 0.22 11.7 0.8 1 23 898 921 898 921 0.97

9 14 0.0094 0.53 10.4 0.4 1 23 1136 1159 1136 1159 0.92

10 14 0.003 0.17 12.0 3.4 1 23 1172 1194 1172 1194 0.98

11 14 0.00054 0.031 14.3 0.1 2 23 1200 1222 1199 1222 0.92

12 14 0.00088 0.049 13.7 3.8 2 23 1254 1278 1253 1278 0.90

13 14 0.46 26 5.1 1.2 1 23 1283 1305 1283 1305 0.93

14 14 0.0027 0.15 12.1 0.9 1 23 1311 1334 1311 1334 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0006	0.034	14.2	0.3	1	23	131	153	131	153	0.98
2	14	0.00012	0.007	16.3	1.3	1	23	378	400	378	400	0.98
3	14	8.8	5e+02	1.1	0.3	1	23	406	429	406	429	0.87
4	14	5.2	2.9e+02	1.8	1.7	1	23	455	478	455	478	0.90
5	14	0.0011	0.062	13.4	1.9	3	23	768	788	767	788	0.92
6	14	0.044	2.5	8.3	1.4	1	23	794	817	794	817	0.98
7	14	0.3	17	5.7	1.5	2	23	855	876	854	877	0.92
8	14	0.0039	0.22	11.7	0.8	1	23	898	921	898	921	0.97
9	14	0.0094	0.53	10.4	0.4	1	23	1136	1159	1136	1159	0.92
10	14	0.003	0.17	12.0	3.4	1	23	1172	1194	1172	1194	0.98
11	14	0.00054	0.031	14.3	0.1	2	23	1200	1222	1199	1222	0.92
12	14	0.00088	0.049	13.7	3.8	2	23	1254	1278	1253	1278	0.90
13	14	0.46	26	5.1	1.2	1	23	1283	1305	1283	1305	0.93
14	14	0.0027	0.15	12.1	0.9	1	23	1311	1334	1311	1334	0.96

Sequence Information

Coding Sequence: ATGGAAGTGAATTACAAATTTACGTGCCGCTGTTGCCTGAAGTCCGAGGCGGAATTCTTCAAGCTGGACTCCCTATCAGATAGTGTCTTAGACGACAATGATGAGTGCTCCACAAAAATACCCCTTATACGCTTACTACTATTCTGTATGCGCACCGAAAACTTACCCGAGCTGCCGCAATATATTTGCGTGGAGTGCAGCAAGAGCTTGCAAATTTCCTACTTCTTCATCCAAAACAGTCTCCGGGCACATGAAATACTGTGTCGCAAACTATGCCCTGGAAAACTGGAGGGTACAACGCGTTTCAATGGCCAACAACTCTGCGAGGAGCGACAAGATGACGCGACAGTCGTCACGCAGAAGACGAAGGCTCCCAAGTCCGGATTGCGGCACGAATGCAAAGTATGTGGCGCCATTATCTATAATCGAGTGGAACTCAAGCAACACATTCGCATGCACACAGAAGAGGCGGGACATGCGTGCAAGCTATGCAAATTTGTGACTTTTAAGCAGCGTCAACTACCAGAGCATTATCAAAACGTCCATGGATTGACGGCTGCCCAAATTGAAAAGCAACTTAAGATCAGAAGATCGATGCaagcggctgctgctgcaacaacatcagctgcGACGTCCACATCAGCTGTGGATGACAATCAGGTGAAGGTGTGCACACTGGAGGACATGGAGCTGCTGATACCCACTGTGATGAGGCCGGAGGACTTTTCGCAGCCACAACTGGATGCAGATCAACTGCGTGATATTGAGCAGCAATTGGCCAACTCGTTGGCTGCTGGCCAATCTGGGTCAGATGCTATGCCAACCGAGCCTACGATAGCGAcgtgtggcagtggcagtagCAACATGAGCATAGGTGCACAGTTTCTGGTCATGCCCGATGGCTCGTTGCAGCAAGTCAATGATGGCGGAGTTGTTTTCGAGTATATTGATGACAGCAAAAGTACCAGCACCACCAAAACAACACTGCAGAGCTTATTGGATGACTCCAAACCAGACGTGTCTTATAATGCAATGGACATTGATGTGAACCACTTGGTACCGAATGCGCTGCCACAGATCACAGTGAAACCACCGCCAAGACCAGGTCCTGGATCAATTGCCGCCCTAAAACACAAGTGTAAACTATGTCCCAAAGCCTTTCCCACGGTGGCGCGTCTTAAATCTCATCAGTTAACACACAGTCatttaccGAAATTCTATTGTGATCAGTGTGCCTACTATTCGCTACGCAGTGCCGATCTTATCCAACATTATATGGAGGAGCACAAGACTTTTATTGGTGATAACAAGAGTCAACTGGAGAAATCATCGCTGTCGCTGACGACAGATAGGAGTCGCATATATTCCTGCGACATGTGCTTATATGAGACACTGACCAGTTTCCAGCTACGAAAACACTACAGCGATAAGCACCAGATGCAGCCCAGTGAGGTGCAGTTGCGTCCCAGCTGGAGCAATGAGTCCAAAGAGAAGGGCGGCAGATCGACGCTAGTCAGTGACCAAAATCAGCTGAGAAACTCACAACCAGCCATATCACATATTCCGCTGGGTATTAAATATCCAACAGTCTCAGCTGTGACAACAGCTGAATTGCGAGCGACAAACGAGTCGAGTGCAACCACAGCGATGCAGCTAAATACAgcacagccaacaacaacaacaacagctgtggTCACGCCTGCTGGTGACATAAATGTGGTCGTAGATGCAACCACGTTGTTCTatgcagcaactgcagcctCAACCACTGTGGAAGCAAcagcgacgacaacaacaacgccaccAATTACAACGGATTCAAACGAGTTTACAATATTCCCAGGGCAATCTTTTGTCAACagcatgacaacaacaacgatgccGGGAGAGACAAGCGGAATGCTGCCTGCTGTTAATACTGTTActgtttctgctgttgctccCACAGGAAATCCAAACTCTAGCATCTTTGGAGATATGCAAGACTTTATTGATGACACCGATGTGGCAGCTGTATGCACCATACCCGCCGACGATATGCCAGTCGTCGATGGCGATGACATTGTTATTGATAACAATAATATGAacctcgattttgatgctgaGAATCTATTTGAAGACTTTGAAGAAGACGCTGAAGTTGGCGAGGaggatgatgacgacgatgagGAGGACGCTGAGAATGATGATGAGAATGATAACAATAATGCGGCTGCCGATCAAAATTTGTTTCTCAccagcgatgatgatgatgttgatgactTTGATGATGAGCAATCGAAGCATCTACAGAAACCATATTGCATCTATTGTAACAAAAAGTTTACCAGCCAATACAAGTTCGAGAATCATATGTTTGTACATCGCGGGTTGGCGCCATATCGCTGTGAGCTCTGCACGAATCTGTACAATATGAAACGTCTGCTTATACGGCACTACAAAACGGTGCACAAGCGTATGCCCACTCGTGACATGGTTCAGGCCAAGGGCGACAAGGTGTTAGTAGAGCGTACAGCCATCGAAAAGCTGAACATCAATGTGGAGAAGCTAGCTCCCATGCTGATGTGTGCCAAGTGTCCTTTTGAATGCGAACAGGAAGCTGAGATGCGGAAGCATCTGAATGCGCATCATGGCATCAACGATGGCGTCTCTGTGCATGCCAACGAGGTGTTTATCATTCGCAAATTGCCTTTTGAGTGTCCACGCTGCATTCGCTCATTTGCGGCCAAGCGAACGCTGACCCGTCATTTGCAACGGAGTCATTTGGTGGACACAATCATTGAGATGCAGGCGCCTCAATTGACAACCAGCacggcggcaacaacaaccacatcaaCGGCTACAACAACACTGCCAAAGAATGACAGCGATGTGTGTGGTGAcaataaagcaacaacaatgcagcaGGAGTCCAACTTCATGGATACTTTGGATGACGATGGCAATGAAAAATGCGAAGACAGTATGATAAACAGTGACACAGGAATAGAAACGGATAATGAAGATATATGCACAAAACCATTAACAACAACGTCAGCAATAGGAACAGTAAAAACAGCTTTAAACGAGGACAATGCAACTGACACAAACACAGAAGAAGCAACATCCGCTGAAGTTGCATCTTCAACAAGGTCAGAATCATCGACACCACTTACAACATCAGAAACAGCAGATAAAGCACCAACAGTGGACTCAACACTCTTTCCACCACCTACGccctttgattttgatttagaTTTCATTGGCAATGATTCACATGCCACTTCGcttaagaacaacaacgataGCTTCAGCGTTATATCAAGCGTTCGTCAACTTTTAAACGGCAGCGACAAACTACTGACAGCTGCATTGGAGCCATCGCCTGTGAAAGACCTACGTCCGAGGCTGCCCCGTACTCCTATTTATGTGTGCAAGCAGTGTAACCAGACATTCGACGAGTTGGGTAAACTGCTGCAGCACGAAATGGATCAACACTCAAGCGGGACTGTGTCGGCGCGCAGAATCTACCAACATCAATGCAACATATGCAGCAGCTCATATCGAACGGTTACGCTGCTGAATTATCACATGAAAAGGCATGCACCTCGTAAAGTTCAATGTGAACAGTGCCCCAAGGAGTTTACGTCCAATTCGGAGATGGAGGAGCATGTGGGGTCGGAGCATGTTGAGTCGAAACAAGTGAAGTTGGAACATGTAAAGTCGGAGCAGTTAGAGTTGGGTAATGTGAAATCGGAGCATGCCAAAAAAATTGACTTGAAATGCGGAATCGATGGTTGCACCAAGACATTCAATTACAAACATCATCTAAAGCGTCATCAGACAGCTTCCCATACTCCCGTTCAGTATATATGTCCCAAGTGTGGACGCGATATGTTGACCAGTCTCAAACTGAGGCATCACATGTATATCCACAAaagcacacactcatacaaGTGTCCCAAGTGTGTGCGCACTTATATAAGAGGCAACAGTTTTCGAAGACACGCTTTGCGTGAACACAAATGGGATCCGACTGATGGCGAAATGGCCAACATATATTGCGTTAATGAAACACCGCCGTCGATGCAATATTCGATACGGGAACTAAGATCGGTGAATGTTGAAAATGAACAGTCGGATTAG
Protein Sequence: MEVNYKFTCRCCLKSEAEFFKLDSLSDSVLDDNDECSTKIPLIRLLLFCMRTENLPELPQYICVECSKSLQISYFFIQNSLRAHEILCRKLCPGKLEGTTRFNGQQLCEERQDDATVVTQKTKAPKSGLRHECKVCGAIIYNRVELKQHIRMHTEEAGHACKLCKFVTFKQRQLPEHYQNVHGLTAAQIEKQLKIRRSMQAAAAATTSAATSTSAVDDNQVKVCTLEDMELLIPTVMRPEDFSQPQLDADQLRDIEQQLANSLAAGQSGSDAMPTEPTIATCGSGSSNMSIGAQFLVMPDGSLQQVNDGGVVFEYIDDSKSTSTTKTTLQSLLDDSKPDVSYNAMDIDVNHLVPNALPQITVKPPPRPGPGSIAALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCAYYSLRSADLIQHYMEEHKTFIGDNKSQLEKSSLSLTTDRSRIYSCDMCLYETLTSFQLRKHYSDKHQMQPSEVQLRPSWSNESKEKGGRSTLVSDQNQLRNSQPAISHIPLGIKYPTVSAVTTAELRATNESSATTAMQLNTAQPTTTTTAVVTPAGDINVVVDATTLFYAATAASTTVEATATTTTTPPITTDSNEFTIFPGQSFVNSMTTTTMPGETSGMLPAVNTVTVSAVAPTGNPNSSIFGDMQDFIDDTDVAAVCTIPADDMPVVDGDDIVIDNNNMNLDFDAENLFEDFEEDAEVGEEDDDDDEEDAENDDENDNNNAAADQNLFLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVLVERTAIEKLNINVEKLAPMLMCAKCPFECEQEAEMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQAPQLTTSTAATTTTSTATTTLPKNDSDVCGDNKATTMQQESNFMDTLDDDGNEKCEDSMINSDTGIETDNEDICTKPLTTTSAIGTVKTALNEDNATDTNTEEATSAEVASSTRSESSTPLTTSETADKAPTVDSTLFPPPTPFDFDLDFIGNDSHATSLKNNNDSFSVISSVRQLLNGSDKLLTAALEPSPVKDLRPRLPRTPIYVCKQCNQTFDELGKLLQHEMDQHSSGTVSARRIYQHQCNICSSSYRTVTLLNYHMKRHAPRKVQCEQCPKEFTSNSEMEEHVGSEHVESKQVKLEHVKSEQLELGNVKSEHAKKIDLKCGIDGCTKTFNYKHHLKRHQTASHTPVQYICPKCGRDMLTSLKLRHHMYIHKSTHSYKCPKCVRTYIRGNSFRRHALREHKWDPTDGEMANIYCVNETPPSMQYSIRELRSVNVENEQSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00602106;
90% Identity: iTF_00507135;
80% Identity: -