Basic Information

Insect: Drosophila immigrans
Gene Symbol: -
Assembly: GCA_963583835.1
Location: OY757143.1:31635373-31643835[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.7e-05 0.0018 18.6 2.1 1 23 291 313 291 313 0.97

2 20 8.9e-06 0.00058 20.1 0.4 1 23 319 341 319 341 0.97

3 20 0.0013 0.086 13.3 0.9 1 23 347 369 347 369 0.95

4 20 1.9e-05 0.0012 19.1 3.1 1 23 375 397 375 397 0.97

5 20 4.3e-05 0.0028 18.0 4.7 1 23 403 425 403 425 0.99

6 20 7.8e-05 0.0051 17.2 5.7 1 23 431 453 431 453 0.97

7 20 3.8e-07 2.5e-05 24.4 4.3 1 23 459 481 459 481 0.98

8 20 1.4e-07 9e-06 25.8 2.4 1 23 487 509 487 509 0.97

9 20 6.6e-06 0.00044 20.5 4.1 1 23 516 538 516 538 0.97

10 20 5.7e-06 0.00038 20.7 6.7 1 23 544 566 544 566 0.98

11 20 8e-05 0.0053 17.1 6.7 1 23 572 594 572 594 0.97

12 20 0.00014 0.0092 16.4 6.5 1 23 600 622 600 622 0.98

13 20 1.2e-05 0.00082 19.7 4.5 1 23 628 650 628 650 0.98

14 20 9e-06 0.00059 20.1 8.1 1 23 656 678 656 678 0.98

15 20 7.3e-06 0.00048 20.4 7.6 1 23 684 706 684 706 0.97

16 20 8.2e-07 5.4e-05 23.4 7.7 1 23 712 734 712 734 0.98

17 20 0.00026 0.017 15.5 9.5 1 23 740 763 740 763 0.95

18 20 9.1e-05 0.006 17.0 0.9 1 23 769 791 769 791 0.98

19 20 0.00099 0.065 13.7 3.4 1 23 801 823 801 823 0.97

20 20 1.1e-05 0.00075 19.8 1.6 1 23 829 852 829 852 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.7e-05	0.0018	18.6	2.1	1	23	291	313	291	313	0.97
2	20	8.9e-06	0.00058	20.1	0.4	1	23	319	341	319	341	0.97
3	20	0.0013	0.086	13.3	0.9	1	23	347	369	347	369	0.95
4	20	1.9e-05	0.0012	19.1	3.1	1	23	375	397	375	397	0.97
5	20	4.3e-05	0.0028	18.0	4.7	1	23	403	425	403	425	0.99
6	20	7.8e-05	0.0051	17.2	5.7	1	23	431	453	431	453	0.97
7	20	3.8e-07	2.5e-05	24.4	4.3	1	23	459	481	459	481	0.98
8	20	1.4e-07	9e-06	25.8	2.4	1	23	487	509	487	509	0.97
9	20	6.6e-06	0.00044	20.5	4.1	1	23	516	538	516	538	0.97
10	20	5.7e-06	0.00038	20.7	6.7	1	23	544	566	544	566	0.98
11	20	8e-05	0.0053	17.1	6.7	1	23	572	594	572	594	0.97
12	20	0.00014	0.0092	16.4	6.5	1	23	600	622	600	622	0.98
13	20	1.2e-05	0.00082	19.7	4.5	1	23	628	650	628	650	0.98
14	20	9e-06	0.00059	20.1	8.1	1	23	656	678	656	678	0.98
15	20	7.3e-06	0.00048	20.4	7.6	1	23	684	706	684	706	0.97
16	20	8.2e-07	5.4e-05	23.4	7.7	1	23	712	734	712	734	0.98
17	20	0.00026	0.017	15.5	9.5	1	23	740	763	740	763	0.95
18	20	9.1e-05	0.006	17.0	0.9	1	23	769	791	769	791	0.98
19	20	0.00099	0.065	13.7	3.4	1	23	801	823	801	823	0.97
20	20	1.1e-05	0.00075	19.8	1.6	1	23	829	852	829	852	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCAGTTTGGGCCACAAGGGCGTCGATCAGCAGCATCATCTGAATCATCATCAATTGCAGCACCATCtgcagcatcatcagcataaTAACAACAGTAAATTGGATAAGCAGCCaacggcggcaacagcagGCATTGAAATGTATAAAGTGAACATTGAGGATATATCGCAATTATTTACGTATCACGAGGTCTTTGGAAAAATCCATGGCGATGTGGTGAATCATGTGGCGGCGGTGCATGGCAGTCAGTTGCCTCCGCCTCAactgccaccgccaccgccactgccaccgcaagcagcagcagcatccgcGACGCATTCATCGGCTagcgcagctgcagccgcagcGGCGGTGTCCACAAATAATGCAGCCGTCGCTGCTGTAATGGCCTCGGCCaatgcagcagccgcagctgcagcggccgcctcagcggcggcaacagcacaacaacagcagcagcagcaacaacagcagcagcaacaacagcagcagcaacagcagcagcaacaacagcagcagcaggttgtGACTAGCACAAATGCTGGAACCCAACAGGGAAGCGCCACGGTGACGACGACTAGCTCaggtagcaacaacagcgggaATAACAGTGggggcaataacaacaataacagtaacagtaacagcaacaacaataacagttcgacgacgacaacaacaacgaccgGTGGTGAACTGCTGATGCCCAAAATGGAGGGCGGCATTCATGGCGTTGACGGTCAATCGAGCGTTGCCTTGGCCCCCGATGGCACACCGATTGCAACCGGGACGCATGTCTGCGATATTTGTGGGAAAATGTTTCAATTTCGTTATCAGCTGATTGTGCACCGTCGCTACCACAGCGAGCGCAAGCCATTTATGTGTCAGGTGTGCGGTCAGGGCTTTACCACATCGCAGGATTTGACCCGTCATGGTAAAATTCATATTGGCGGTCCCATGTTCACATGCATTGTCTGCTTCAATGTTTTCGCCAACAACACGAGCTTGGAGCGGCACATGAAACGTCACTCCACGGACAAACCATTCGCCTGCACCATTTGCCAAAAGACATTTGCGCGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACCGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCATCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTCACACGCAAGGAGAATTTGATAAATCACGTGCGCCAGCACACGGGAGAATCGCCGCATCGCTGCTCCTACTGCAGCAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGCGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTCACACGCAAGGAGCATTTGTTAAATCACGTGCGACAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAACCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACCTATTGCACGAAGACCTTCACAAGGAAGGAGCACCTAACGAATCATGTGCGCCAGCACACGGGCGATTCGCCGCATCGCTGCTCCTACTGCAAGAAGACCTTCACCCGGAAGGAGCATCTGACGAATCATGTCCGCCTGCACACTGGAGATTCGCCGCACAAATGCGAATACTGTCAGAAGACCTTCACACGGAAGGAGCATCTCAATAATCACATGCGTCAGCATTCGAGCGACAATCCCCATTGCTGCAATGTGTGCAACAAACCGTTCACACGCAAGGAGCATCTGATCAATCATATGTCACGTTGCCACACCGGCGATCGTCCGTTCACGTGCGAGACATGCGGCAAATCGTTCCCCCTCAAGGGCAATCTGTTGTTCCATCAGCGTAGCCATACCAAGGGACAGGAATGCGAGCGTCCGTTTGCCTGCGAAAAGTGCCCCaagaatttcatttgcaaagGTCACTTGGTCTCGCACATGCGATCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCGTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCACAAATACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCGCATCATTCGGCGACGACCACAATGCATACCATTCAGCAGATAACAGCGGGCGCTGCAGCGGCTGGCGCCGGTGCCGTCCAGCTGACGCCAGGCCTGGTGCCGTTGGTCACCAGCTCGCTCATCTCCTCGCACAATGCCCAGCAAacgcagaagcagcagcaagcggCCGCCGCAGTCCAGCAACaggcagctgccgccgccgcggcacaacagcaacaggcagccgctgcggctgcggctcagcagcaggcagcggCCGTGgcacatcagcagcatcagcaacaggtggccgcacagcagcagcaacaacagcagcaggctgCCGCGGCtgcacatcagcaacagcagctgcagcagcagcaactgttgcagtTGTCCATACAGCAGGCGGCGCATCATcaccagcagcatcagcagcagcaacagcagcagcaacaacagcagcagcagcaacaccatcagcagcagcagcaggcacatCCGCAGGCaccgccacagcagcaacaacagcaaccgccACCGCAGGTTCCCATCGCCCTGATCAGTGATCCAAGCGCATTGGCGCGCGCTGCCATGCAGCTGCAACATCTGCCCACGAATGTGGAGCAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTISLGHKGVDQQHHLNHHQLQHHLQHHQHNNNSKLDKQPTAATAGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQAAAASATHSSASAAAAAAAVSTNNAAVAAVMASANAAAAAAAAASAAATAQQQQQQQQQQQQQQQQQQQQQQQQQQVVTSTNAGTQQGSATVTTTSSGSNNSGNNSGGNNNNNSNSNSNNNNSSTTTTTTTGGELLMPKMEGGIHGVDGQSSVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKENLINHVRQHTGESPHRCSYCSKTFTRKEHLVNHIRQHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLVTSSLISSHNAQQTQKQQQAAAAVQQQAAAAAAAQQQQAAAAAAAQQQAAAVAHQQHQQQVAAQQQQQQQQAAAAAHQQQQLQQQQLLQLSIQQAAHHHQQHQQQQQQQQQQQQQQHHQQQQQAHPQAPPQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00509230;
80% Identity: -