Basic Information

Insect: Drosophila hydei
Gene Symbol: -
Assembly: GCA_003285905.2
Location: NW:1121256-1123478[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.1e-16 2e-13 49.3 0.0 2 45 365 408 364 408 0.95

2 3 0.039 71 2.8 0.0 28 37 438 447 437 452 0.90

3 3 2.7e-18 5e-15 54.5 0.0 2 42 474 514 473 516 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.1e-16	2e-13	49.3	2	45	365	408	364	408	0.95
2	3	0.039	71	2.8	28	37	438	447	437	452	0.90
3	3	2.7e-18	5e-15	54.5	2	42	474	514	473	516	0.95

Sequence Information

Coding Sequence: ATGAATCACCTAAAATGGATGGGCCACTCGTCCACAATAATGGATATACAGCGCGTTCTGCTACATCAACAAAGCAACAATCAGCAATGCGAAGTATTGCTTGTGGCCAAAGATGGCATCAGTGTACGCGCCCACCTCTTCGTTCTAAGCACTTGCAGCGACTTAATGCGCAATCTGCTTGTCGATTTACCCGCCGGTCAGGAGGCGACTGTCATTTTACCAGACATCCGTGGTGAGCTGCTCGAGAATGTGTTATCGTTTATTTACATGGGGGAAACTAGTTTAACCTCTGCCATGCTGCCCGAGTTTCTCGGGGCCATTAATTTACTGGGCATCAAGTCTGCCATAAGCTTTGATACCAATCCGACATCCATGACGAGCACAAATGTTATAAGTGGCGCTATGGCTGTCGAGGAAGCCAAATCAATTAGCGGTTTGCACATAGCGAATACAGCTCTtatggaggaggaggaagaggaagatgCAGGAGCAGTAGTTGGCAAATTGGAAGTGGATAATACCGTACTCACTAATCCTCAACACCAGCACGAGCAGGAAGGCCGAACGCTGGAATTCCTGGATGTGTACGGTGAACAGCCCAAGATAACATATTCAATCGAACACATGGGCGGCACAACCAGCGGaaatcagtatatatatacagagaaTACGGGAACGTTTACCATAACACAATCATCTGTGTCCAAGTTAGGAGTGCAAGGCAGCTCAGCTGTGGTTGATACTGTGGAGACAGCTGAGCTAGGCGACGAGGATGTAGAGGCAGACGTTACAGACGAGCACGAAGAATCGGAGTCACAATTAATCGAGGAGGAATATGTTGGTTCGGCTGATCCTTTAATAGAGATGAGCACAGAGGCGGATGTTGATATGCACGAGGATGCAATGCACGATGGAGACGAGGAGGAAGATGATGAGCTGTTGGATGTGAAACCTCGCAAATCTCAACTCgatatgaaaatgttaaaaccCAAGTCACGCCAGCGTCCAGCATCATCAAAGGCAACGAAGAAAGCAATGACcaaacagcatcaacaacacGCAGCACTTAAAAAAGAATGCAAAGATGATCTCAATGAAGCCCTCGACCTCGCAGCGGCTGCCGTGCTACACGAAGGCCTCAGCTTGCAAAAAGCTGCTGATCGCTACGATATATCAAAAACCGTGCTTTGGCGACGTGTGCGATCGAATCCAGCCTATATGCGGATAAAACGGGAAAAACCTTCGCTTTCGGAAGCTTATGAACGCCTGAAGAATGGCGATTCGCTGAAAAGCATAAGCCAGGATCTCCATATACCCATGTCGACGCTGCACCGCCACAAAGTGCGTCTTGCGGCACAGGGTCGCCTGCCCGACTTCGTTGCTTGCCGGCGGCGTGACAGCACCCCGAAGGATGAGCTGCGTGAAAAGCTAGCTAAGGCAGTGCATGCGTGCCTCAATGATGGAATGACCCAAAATCATGCAGCCAATCTCTTTGAAATACCTAAGAGCACGCTATGGCGGCACTTGCAACGGCGTGGGACCGAGGCGGAGCGTAAAGTCAAGGAGGAACATGAAGAAGAGGATGATGATatgaattaa
Protein Sequence: MNHLKWMGHSSTIMDIQRVLLHQQSNNQQCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPAGQEATVILPDIRGELLENVLSFIYMGETSLTSAMLPEFLGAINLLGIKSAISFDTNPTSMTSTNVISGAMAVEEAKSISGLHIANTALMEEEEEEDAGAVVGKLEVDNTVLTNPQHQHEQEGRTLEFLDVYGEQPKITYSIEHMGGTTSGNQYIYTENTGTFTITQSSVSKLGVQGSSAVVDTVETAELGDEDVEADVTDEHEESESQLIEEEYVGSADPLIEMSTEADVDMHEDAMHDGDEEEDDELLDVKPRKSQLDMKMLKPKSRQRPASSKATKKAMTKQHQQHAALKKECKDDLNEALDLAAAAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPDFVACRRRDSTPKDELREKLAKAVHACLNDGMTQNHAANLFEIPKSTLWRHLQRRGTEAERKVKEEHEEEDDDMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00549654;
90% Identity: iTF_00546570;
80% Identity: iTF_00520023;