Dgun000798.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila gunungcola
Gene Symbol
PAXBP1
Assembly
GCA_011057485.1
Location
WTSR01005247.1:1714905-1718732[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-31 1.9e-27 96.4 0.7 4 272 644 851 641 853 0.94

Sequence Information

Coding Sequence
ATGTCGCTTTTCCGCAAACCGAAGAAAATCCAGCGGCGCGTGTTTTCCAGCAACgcggacgaggaggaggacggcACATCCTTGGACCCGGACGccggaatggaaatggaggcGCCTCCGCCTCCCATTATTTCCGGCAAGCGGGACAAAGAGAAGAGCCGGAAGGCCNNNAAGGCCCAGGAGGACAGTAGCAAACCGAAGGCGCTGCTCAGCTTCGCGGATGAGGGTGANNNNGTGGCTGGANTACCAGAGTCAAAAGAGTCNCTAATCCCCAAACCCATTGCAGATGACGACGGCGAGGTCTTCCAAGTGCGCAAATCGTCGCACAGCAAGAAAGTGATGCGTATGTTGGACAAGGAGCGGCGCAAGAAGAAGCGCGAGGAGCGGGCGGAAAACAGCGGACACCYCGGTGGCGAAAATGGTAGTACACAGCATTTAGAGTCGTCCGGTGGCCCATCTTCGGGTCCTGCCAACTCCAGCTCAAATCCTGTCAATGCTGGCAGATATAAAAGTGCCAGCGATCagagtaaaagtaaaaaaagtGATAATCATATGATCCAAACCGAAATACGCACAGACGACTTTGTGCTAGTGGTAAAGAAATCCGAGACCCCCGAAGCAGTTCTAAATGGTCGTGCTGCCCTTTGTGCTGGGCGGGAGGATATGAGCGACGAAGATGACCAGCAGTCCGAGRATGGAGTCCACGACAAAACGCGCCATCGCTTCTCCAAGCCAGAACACTTGAAACAGATGCTGGAAAGCGGTTCCATTCCGGATGCAGCCATGATACACGCTGCCCGAAAGCGCCGTCAGCGAGCCAGAGAACAGGGTGCAGGCGACTATATACCCGTTGAGGAGCCCAAGGAGCCGCCCAAGCTGAGCACCCGTCTGCCTTGCGAAGACGTTGAGGGCGATCAGTCGGATGACGAGGAGCGCATGGACATGAACGACATTACCGGACGCAAAGAGCGCGAAGAGCGACGCGAGCAATTCTATGCCGTCGAGAATGATTCCACCGACGAAGATTCTGATCGCGAAATGAACGAATGGGAGAACCAACAGATCCGCAAAGGAGTGACGGCTGCCCAGTTGGTCCATTCCCAGCACGAAACCGTACTCTCCCGCTTCATGATCAAGCCAGCTACTCCTGGAAACGGTTCCGCCATGGACGACGGGGACTTAGCGGCGCCGCAGTCCACGTCCACGCTGCTGGAGCAGGCTTACGCAAAGAACGCTCTCGATCGCAGCAATTTGGCTACGGCAGTTCGCTCATCCGCCAAGTCGAAGAAGGAAAAGGCCAAGGCTACAGCTTTGCGCACTCCGCAGGAGATCTTCGCCGCCATTCAAGCACGTCTTAGCGAGCTCAAAGAACGCTCGGCGGATCACAGCGCCAGTATGGCCAAGATCAGTATCGAACTGAAGGCATTAAAGCTTCAGCAGCTGGAGTGCCAGCAGAACGCACCAACAGCGGCGGCAAAGTACAAGTTCTACCAGGAGGTAAAATGCTATGTGAATGACCTTGTGGACTGCTTGGCCGAAAAGGCGCCGGTGATTAACGACCTGGAAAAGCGGGCCCTGCTGCAATACGGCAAGAACCAACGATATCTGGTAAATCGACGGCGGCAGGATGTCCGGGATCAGGCCAAGGAAATCGCCGAGGCAGCAAAACCCGTCTCAGCTGCTGCCCGACGAACACCAGAATACGAAGAGCAAGTCCGCCGTGCCGCAGAACGGGAGGGCCGAAGAACACGTCGTCGATGCGAGCGTGAGCGGAACGATCTGCTCTCCTCCCACCTGGATGGCATGTCCAGCGACGATGAAATCGCCGACCAACAGCAGGAGCTGAGCGTGGCGTCCACGGCACAAATAGAATCCCAGTCGGTGGAGGCCTTTGAGGACGTTACCGACGACTTCAGCAAGATCGAGCTAATCCTGATGAAGTTTTATGCATGGCGAAAGACTGACATGTCCTCGTACCAGGACGCATTCGTTAGTCTGTGCCTTCCGAAACTCTTGGCGCCGCTGGTGCGCCACGAACTGGTCCTGTGGTCGCCGCTGTTGGATGAGTACGCGGACATCGAGAATATGCGATGGTATCAAGCCTGCATGTTGTACGCCTGCCAGCCAGATGAAACCGTGGAGCAGCTGAAGAACGACCCGGATGTCAACCTGGTACCGTCGCTCATCGAAAAGATCGTTCTGCCGAAGGTGACTGcCTTGGTTACGGAATGCTGGGACCCCTTGTCCACCACGCAGACCCTTAGATTGGTTGGGTTCATCAATCGGCTGGGCCGCGAATTTCCGCTGAGCGGCACTAACAAGCAGCTTAACAAACTTTTCGAATCCATCATGGAACGCATGCGRTTAGCCCTAGAAAACGACGTCTTTATCCCTATATTTCCAAAGCAAGTCCAAGAGGCAAAGACGTCGTTCTTTCAGCGTCAGTTTTGCAGCGGCCTTAAGYTGTTTCGAAACTTCCTCAGCTGGCAGGGTATCCTGGCGGATAAACTTTTGCGGGAACTGGCCATTGGAGCGCTGCTAAACCGCTACCTTCTATTGGCCATGCGGGTCTGCACGCCAAACGATGCCATAAACAAGGCATACGTCATTGTGAATACCTTGCCCACGGTTTGGCTGCTGCCCAACAGCGAGACMCTCAAGAACATGGAGCTTTTCATTGGatacataaaacaaacattagaGAGCTGTGATGCAAGCAATCCAGTCTTCATGCAATCAAGCGATAAGGCCAAGCAAATACTTCAAAGACTGCATAGTTTATAA
Protein Sequence
MSLFRKPKKIQRRVFSSNADEEEDGTSLDPDAGMEMEAPPPPIISGKRDKEKSRKAXKAQEDSSKPKALLSFADEGXXVAGXPESKESLIPKPIADDDGEVFQVRKSSHSKKVMRMLDKERRKKKREERAENSGHXGGENGSTQHLESSGGPSSGPANSSSNPVNAGRYKSASDQSKSKKSDNHMIQTEIRTDDFVLVVKKSETPEAVLNGRAALCAGREDMSDEDDQQSEXGVHDKTRHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQRAREQGAGDYIPVEEPKEPPKLSTRLPCEDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDSTDEDSDREMNEWENQQIRKGVTAAQLVHSQHETVLSRFMIKPATPGNGSAMDDGDLAAPQSTSTLLEQAYAKNALDRSNLATAVRSSAKSKKEKAKATALRTPQEIFAAIQARLSELKERSADHSASMAKISIELKALKLQQLECQQNAPTAAAKYKFYQEVKCYVNDLVDCLAEKAPVINDLEKRALLQYGKNQRYLVNRRRQDVRDQAKEIAEAAKPVSAAARRTPEYEEQVRRAAEREGRRTRRRCERERNDLLSSHLDGMSSDDEIADQQQELSVASTAQIESQSVEAFEDVTDDFSKIELILMKFYAWRKTDMSSYQDAFVSLCLPKLLAPLVRHELVLWSPLLDEYADIENMRWYQACMLYACQPDETVEQLKNDPDVNLVPSLIEKIVLPKVTALVTECWDPLSTTQTLRLVGFINRLGREFPLSGTNKQLNKLFESIMERMRLALENDVFIPIFPKQVQEAKTSFFQRQFCSGLKLFRNFLSWQGILADKLLRELAIGALLNRYLLLAMRVCTPNDAINKAYVIVNTLPTVWLLPNSETLKNMELFIGYIKQTLESCDASNPVFMQSSDKAKQILQRLHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00919050;
90% Identity
iTF_00504680; iTF_00604833; iTF_00539650; iTF_00578530; iTF_00619143; iTF_00588136; iTF_00494378; iTF_00596650; iTF_00581523; iTF_00529556; iTF_00548056; iTF_00605562; iTF_00511998; iTF_00592383; iTF_00505396; iTF_00536758; iTF_00565367;
80% Identity
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